| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003D05 | Sequence | 207 | 004597 (14) | 200 | 006186 (6) | ref|XP_006580009.1| | 2e-24 | PREDICTED: uncharacterized protein LOC100806841 isoform X1 [Glycine max] ref|XP | |||
| JMFF008L17 | Sequence | 647 | 004597 (14) | 774 | 006186 (6) | ref|XP_009586701.1| | 6e-58 | PREDICTED: uncharacterized protein LOC104084522 isoform X1 [Nicotiana tomentosi | |||
| JMFF035A04 | Sequence | 548 | 004597 (14) | 689 | 006186 (6) | ref|XP_009586701.1| | 1e-39 | PREDICTED: uncharacterized protein LOC104084522 isoform X1 [Nicotiana tomentosi | |||
| JMFF044F19 | Sequence | 640 | 004597 (14) | 590 | 006186 (6) | ref|XP_009586702.1| | 2e-41 | PREDICTED: uncharacterized protein LOC104084522 isoform X2 [Nicotiana tomentosi | |||
| JMFN012D02 | Sequence | 492 | 006186 (6) | ref|XP_009586702.1| | 2e-12 | PREDICTED: uncharacterized protein LOC104084522 isoform X2 [Nicotiana tomentosi | |||||
| JMFS009F10 | Sequence | 612 | 006186 (6) | ref|XP_009586701.1| | 3e-22 | PREDICTED: uncharacterized protein LOC104084522 isoform X1 [Nicotiana tomentosi | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF008L17+ TAG
____________________________________________________________
consensus TAG
. : . : . : . : . : . :
rJMFF008L17+ ACACGGGGGAGGAAAGCGTTGCAAGGTCGAGAAGTGTGAAAAGAGCGCCCAAGGTAGCAC
____________________________________________________________
consensus ACACGGGGGAGGAAAGCGTTGCAAGGTCGAGAAGTGTGAAAAGAGCGCCCAAGGTAGCAC
. : . : . : . : . : . :
rJMFF044F19+ GAAAGCGTTGCATCTGGGGAGGAGAAGGGAAATG
rJMFF003D05+ GAGGGGGAAAGCGTTGCATCTGGGGAGGAGAAGGGAAATG
rJMFF008L17+ GGACTTCTGCAAGGCTCACGGAGGGGGAAAGCGTTGCATCTGGGGAGGAGAAGGGAAATG
rJMFF035A04+ GAAAGCGTTGCATCTGGGGAGGAGAAGGGAAATG
____________________________________________________________
consensus GGACTTCTGCAAGGCTCACGGAGGGGGAAAGCGTTGCATCTGGGGAGGAGAAGGGAAATG
. : . : . : . : . : . :
rJMFF044F19+ CGAGAAATTTGCGAGGGGGAGAGGCGGCCTCTGTGCTGCTCACAGCAGCTTGGCTCAAGG
rJMFF003D05+ CGAGAAATTTGCGAGGGGGAGAGGCGGCCTCTGTGCTGCTCACAGCAGCTTGGCTCAAGG
rJMFF008L17+ CGAGAAATTTGCGAGGGGGAGAGGCGGCCTCTGTGCTGCTCACAGCAGCTTGGCTCAAGG
rJMFF035A04+ CGAGAAATTTGCGAGGGGGAGAGGCGGCCTCTGTGCTGCTCACAGCAGCTTGGCTCAAGG
JMFS009F10- CTTGGCTCAAGG
____________________________________________________________
consensus CGAGAAATTTGCGAGGGGGAGAGGCGGCCTCTGTGCTGCTCACAGCAGCTTGGCTCAAGG
. : . : . : . : . : . :
rJMFF044F19+ AATGGAGACGAACAAAGGAAGCTTGATCGGGCCAGGGCTTTTCCGGGGACTCGTTCCATC
rJMFF003D05+ AATGGAGACGAACAAAGGAAGCTTGATCGGGCCAGGGCTTTTCCGGGGACTCGTTCCATC
rJMFF008L17+ AATGGAGACGAACAAAGGAAGCTTGATCGGGCCAGGGCTTTTCCGGGGACTCGTTCCATC
rJMFF035A04+ AATGGAGACGAACAAAGGAAGCTTGATCGGGCCAGGGCTTTTCCGGGGACTCGTTCCATC
JMFS009F10- AATGGAGACGAACAAAGGAAGCTTGATCGGGCCAGGGCTTTTCCGGGGACTCGTTCCATC
____________________________________________________________
consensus AATGGAGACGAACAAAGGAAGCTTGATCGGGCCAGGGCTTTTCCGGGGACTCGTTCCATC
. : . : . : . : . : . :
rJMFF044F19+ AACCTCCACCGTAATAACCAGTTTCGAGAACAACCATTCTTCCTCCATTGTCAGCGCAAC
rJMFF003D05+ AACNTCCACCGTAATAACCAGTTTCGAGAACAA
rJMFF008L17+ AACCTCCACCGTAATAACCAGTTTCGAGAACAACCATTCTTCCTCCATTGTCAGCGCAAC
JMFN012D02- TTTCGAGAACAACCATTCTTCCTCCATTGTCAGCGCAAC
rJMFF035A04+ AACCTCCACCGTAATAACCAGTTTCGAGAACAACCATTCTTCCTCCATTGTCAGCGCAAC
JMFS009F10- AACCTCCACCGTAATAACCAGTTTCGAGAACAACCATTCTTCCTCCATTGTCAGCGCAAC
____________________________________________________________
consensus AACCTCCACCGTAATAACCAGTTTCGAGAACAACCATTCTTCCTCCATTGTCAGCGCAAC
. : . : . : . : . : . :
rJMFF044F19+ CTCAGACTCAGCCAACTCCTCCAAACGACGACAACTCATTCCTCCTCAGGTACTGGTTCC
rJMFF008L17+ CTCAGACTCAGCCAACTCCTCCAAACGACGACAACTCATTCCTCCTCAGGTACTGGTTCC
JMFN012D02- CTCAGACTCAGCCAACTCCTCCAAACGACGACAACTCATTCCTCCTCAGGTACTGGTTCC
rJMFF035A04+ CTCAGACTCAGCCAACTCCTCCAAACGACGACAACTCATTCCTCCTCAGGTACTGGTTCC
JMFS009F10- CTCAGACTCAGCCAACTCCTCCAAACGACGACAACTCATTCCTCCTCAGGTACTGGTTCC
____________________________________________________________
consensus CTCAGACTCAGCCAACTCCTCCAAACGACGACAACTCATTCCTCCTCAGGTACTGGTTCC
. : . : . : . : . : . :
rJMFF044F19+ TCTGTCAATGAAGGCCTCAGCATCCTGCTCGGGCCCAAGAAATTCAGAGAGGCCAGAGAG
rJMFF008L17+ TCTGTCAATGAAGGCCTCAGCATCCTGCTCGGGCCCAAGAAATTCAGAGAGGCCAGAGAG
JMFN012D02- TCTGTCAATGAAGGCCTCAGCATCCTGCTCGGGCCCAAGAAATTCAGAGAGGCCAGAGAG
rJMFF035A04+ TCTGTCAATGAAGGCCTCAGCATCCTGCTCGGGCCCAAGAAATTCAGAGAGGCCAGAGAG
JMFS009F10- TCTGTCAATGAAGGCCTCAGCATCCTGCTCGGGCCCAAGAAATTCAGAGAGGCCAGAGAG
____________________________________________________________
consensus TCTGTCAATGAAGGCCTCAGCATCCTGCTCGGGCCCAAGAAATTCAGAGAGGCCAGAGAG
. : . : . : . : . : . :
rJMFF044F19+ AACCTCTGCAATTGGTGGTGGGAATAGCGACGCTAGCAAGAGCTTCGAATTTGCAATTCC
rJMFF008L17+ AACCTCTGCAATTGGTGGTGGGAATAGCGACGCTAGCAAGAGCTTCGAATTTGCAATTCC
JMFN012D02- AACCTCTGCAATTGGTGGTGGGAATAGCGACGCTAGCAAGAGCTTCGAATTTGCAATTCC
rJMFF035A04+ AACCTCTGCAATTGGTGGTGGGAATAGCGACGCTAGCAAGAGCTTCGAATTTGCAATTCC
JMFS009F10- AACCTCTGCAATTGGTGGTGGGAATAGCGACGCTAGCAAGAGCTTCGAATTTGCAATTCC
____________________________________________________________
consensus AACCTCTGCAATTGGTGGTGGGAATAGCGACGCTAGCAAGAGCTTCGAATTTGCAATTCC
. : . : . : . : . : . :
rJMFF044F19+ CGAGGGAAGAGTCCATGGCGGGGGCCTTCTGTCGTTGCTCGGTGGCAACCTGAAGAACGC
rJMFF008L17+ CGAGGGAAGAGTCCATGGCGGGGGCCTTCTGTCGTTGCTCGGTGGCAACCTGAAGAACGC
JMFN012D02- CGAGGGAAGAGTCCATGGCGGGGGCCTTCTGTCGTTGCTCGGTGGCAACCTGAAGAACGC
rJMFF035A04+ CGAGGGAAGAGTCCATGGCGGGGGCCTTCTGTCGTTGCTCGGTGGCAACCTGAAGAACGC
JMFS009F10- CGAGGGAAGAGTCCATGGCGGGGGCCTTCTGTCGTTGCTCGGTGGCAACCTGAAGAACGC
____________________________________________________________
consensus CGAGGGAAGAGTCCATGGCGGGGGCCTTCTGTCGTTGCTCGGTGGCAACCTGAAGAACGC
. : . : . : . : . : . :
rJMFF044F19+ AATTGTTTAAAGTTGTTCACTTTTGTTGTTGTTGTTGTTGTTTTAGCAGACATTCTGTCT
rJMFF008L17+ AATTGTTTAAAGTTGTTCACTTTTGTTGTTGTTGTTGTTGTTTTAGCAGACATTCTGTCT
JMFN012D02- AATTGTTTAAAGTTGTTCACTTTTGTTGTTGTTGTTGTTGTTTTAGCAGACATTCTGTCT
rJMFF035A04+ AATTGTTTAAAGTTGTTCACTTTTGTTGTTGTTGTTGTTGTTTTAGCAGACATTCTGTCT
JMFS009F10- AATTGTTTAAAGTTGTTCACTTTTGTTGTTGTTGTTGTTGTTTTAGCAGACATTCTGTCT
____________________________________________________________
consensus AATTGTTTAAAGTTGTTCACTTTTGTTGTTGTTGTTGTTGTTTTAGCAGACATTCTGTCT
. : . : . : . : . : . :
rJMFF044F19+ TCTGATCTGTGCTGGAAACTCCTGCAAATTTCATTCCTCAAATTTGCAGCTGTATGCATG
rJMFF008L17+ TCTGATCTGTGCTGGAAACTCCTGCAAATTTCATTCCTCAAATTTGCAGCTGTATGCATG
JMFN012D02- TCTGATCTGTGCTGGAAACTCCTGCAAATTTCATTCCTCAAATTTGCAGCTGTATGCATG
rJMFF035A04+ TCTGATCTGTGCTGGAAACTCCTGCAAATTTCATTCCTCAAATTTGCAGCTGTATGCATG
JMFS009F10- TCTGATCTGTGCTGGAAACTCCTGCAAATTTCATTCCTCAAATTTGCAGCTGTATGCATG
____________________________________________________________
consensus TCTGATCTGTGCTGGAAACTCCTGCAAATTTCATTCCTCAAATTTGCAGCTGTATGCATG
. : . : . : . : . : . :
rJMFF044F19+ TGTTTGTGGT
rJMFF008L17+ TGTTTGTGGTAACTGTCATCTTGTCAAAATGTATTTGTTGTTGTTCAGTATTCCCAAATA
JMFN012D02- TGTTTGTGGTAACTGTCATCTTGTCAAAATGTATTTGTTGTTGTTCAGTATTCCCAAATA
rJMFF035A04+ TGTTTGTGGTAACTGTCATCTTGTCAAAATGTATTTGTTGTTGTTCAGTATTCCCAAATA
JMFS009F10- TGTTTGTGGTAACTGTCATCTTGTCAAAATGTATTTGTTGTTGTTCAGTATTCCCAAATA
____________________________________________________________
consensus TGTTTGTGGTAACTGTCATCTTGTCAAAATGTATTTGTTGTTGTTCAGTATTCCCAAATA
. : . : . : . : . : . :
rJMFF008L17+ ATGCCAATGTATGTAATAAATTGAAGGTTATGTATTTATAGAGTCGATATA
JMFN012D02- ATGCCAATGTATGTAATAAATTGAAGGTTATGT
rJMFF035A04+ ATGCCAATGTATGTAATAAATTGAAGGTTATGTATTTATAGAGTCGATATA
JMFS009F10- ATGCCAATGTATGTAATAAATTGAAGGTTATGTATTTATAGAGTCGATATAGATGAAAAT
____________________________________________________________
consensus ATGCCAATGTATGTAATAAATTGAAGGTTATGTATTTATAGAGTCGATATAGATGAAAAT