Contig 006181:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS004A12Sequence598006181 (3)ref|XP_010314717.1|2e-91PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform
JMFS013G10Sequence572006181 (3)ref|XP_011020290.1|5e-62PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform
JMFS162C06Sequence594006181 (3)ref|XP_010314717.1|8e-104PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform

Alignment

This contig is upended


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JMFS162C06+                          ATGTCCTCAAGATCTTCACATATTCTAAACAAGCTCATCAATTTT
                      ____________________________________________________________
consensus                            ATGTCCTCAAGATCTTCACATATTCTAAACAAGCTCATCAATTTT
 
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JMFS162C06+           CGGAAAATGTCTTCATCATGCAACATGAGCTCTATCAAACGTAACTGATCAGCAATGCCA
JMFS004A12+             GAAAATGTTTTCATCATGCAACATGAGCTCTATCAAACGTAACTGATCAGCAATGCCA
                      ____________________________________________________________
consensus             CGGAAAATGTTTTCATCATGCAACATGAGCTCTATCAAACGTAACTGATCAGCAATGCCA
 
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JMFS162C06+           CTCTCCACAACAGCCTTTAGTATCAAAGGGAGGGTTGATATCTCAACTGGAGGCAACTCC
JMFS004A12+           CTCTCCACAACAGCCTTTAGTATCAAAGGGAGGGTTGATATCTCAACTGGAGGCAACTCC
                      ____________________________________________________________
consensus             CTCTCCACAACAGCCTTTAGTATCAAAGGGAGGGTTGATATCTCAACTGGAGGCAACTCC
 
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JMFS162C06+           CTCAACTCACTATTGATACTATGATACCTATCACTGTTAAGATTATTGAGTTGCATATTT
JMFS004A12+           CTCAACTCACTATTGATACTATGATACCTATCACTGTTAAGATTATTGAGTTGCATATTT
                      ____________________________________________________________
consensus             CTCAACTCACTATTGATACTATGATACCTATCACTGTTAAGATTATTGAGTTGCATATTT
 
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JMFS162C06+           CTTTGAACATTACAGATATGTTCCCATATGTGAGCACAGCCAGTTGTTTCTTGAAAGCTA
JMFS013G10+                  CATTACAGATATGTTCCCATATGTGAGCACAGCCAGTTGTTTCTTGAAAGCTA
JMFS004A12+           CTTTGAACATTACAGATATGTTCCCATATGTGAGCACAGCCAGTTGTTTCTTGAAAGCTA
                      ____________________________________________________________
consensus             CTTTGAACATTACAGATATGTTCCCATATGTGAGCACAGCCAGTTGTTTCTTGAAAGCTA
 
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JMFS162C06+           AGGGCCAGCTCAGTTGAGTACTCTGGATCTCTCCATGAAATTATGGTATCTTCTTGTTTA
JMFS013G10+           AGGGCCAGCTCAGTTGAGTACTCTGGATCTCTCCATGAAATTATGGTATCTTCTTGTTTA
JMFS004A12+           AGGGCCAGCTCAGTTGAGTACTCTGGATCTCTCCATGAAATTATGGTATCTTCTTGTTTA
                      ____________________________________________________________
consensus             AGGGCCAGCTCAGTTGAGTACTCTGGATCTCTCCATGAAATTATGGTATCTTCTTGTTTA
 
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JMFS162C06+           CGATAAATATCATCCGAGCTGATGCGATGAAGTAGCAGTGTTTCATTATCTGCCTCATCA
JMFS013G10+           CGATAAATATCATCCGAGCTGATGCGATGAAGTAGCAGTGTTTCATTATCTGCCTCATCA
JMFS004A12+           CGATAAATATCATCCGAGCTGATGCGATGAAGTAGCAGTGTTTCATTATCTGCCTCATCA
                      ____________________________________________________________
consensus             CGATAAATATCATCCGAGCTGATGCGATGAAGTAGCAGTGTTTCATTATCTGCCTCATCA
 
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JMFS162C06+           ACAACAAGCAACCCAACCTCTTCTGATCTCTCCAAATAATCTACAGTTACATGCCCTGTT
JMFS013G10+           ACAACAAGCAACCCAACCTCTTCTGATCTCTCCAAATAATCTACAGTTACATGCCCTGTT
JMFS004A12+           ACAACAAGCAACCCAACCTCTTCTGATCTCTCCAAATAATCTACAGTTACATGCCCTGTT
                      ____________________________________________________________
consensus             ACAACAAGCAACCCAACCTCTTCTGATCTCTCCAAATAATCTACAGTTACATGCCCTGTT
 
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JMFS162C06+           CCTTGGTCATCCCATTTCCCATCATCATTTAGACGGTAGACCTTAACACGCTGGAGCGAA
JMFS013G10+           CCTTGGTCATCCCATTTCCCATCATCATTTAGACGGTAGACCTTAACACGCTGGAGCGAA
JMFS004A12+           CCTTGGTCATCCCATTTCCCATCATCATTTAGACGGTAGACCTTAACACCCTGGAGCGAA
                      ____________________________________________________________
consensus             CCTTGGTCATCCCATTTCCCATCATCATTTAGACGGTAGACCTTAACACGCTGGAGCGAA
 
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JMFS162C06+           TTGTTTTCGTTGGGTGACTTCTCCTGAGCACCCATGGAAGTTAAGCGGCGAAGGA     
JMFS013G10+           TTGTTTTCGTTGGGTGACTTCTCCTGAGCACCCATGGAAGTTAAGCGGCGAAGGA     
JMFS004A12+           TTGTTTTCGTTGGGTGACTTCTCCTTCGCCGCTTAACTTCCATGGGTGCTCAGGAGAAGT
                      ____________________________________________________________
consensus             TTGTTTTCGTTGGGTGACTTCTCCTGAGCACCCATGGAAGTTAAGCGGCGAAGGAGAAGT
 
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JMFS004A12+           CACCCAACGACAGAGAATGAATTGAAGGCAAGTATTTTTTTTTTTAATTTTTTTTGGTTT
                      ____________________________________________________________
consensus             CACCCAACGACAGAGAATGAATTGAAGGCAAGTATTTTTTTTTTTAATTTTTTTTGGTTT