| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN028A20 | Sequence | 515 | 006176 (8) | gb|ACO40080.1| | 1e-09 | kunitz trypsin inhibitor 4, partial [Populus balsamifera] | |||||
| JMFN045B03 | Sequence | 622 | 006176 (8) | gb|ACS92519.1| | 1e-11 | Kunitz-type protease inhibitor KPI-D8 [Populus trichocarpa x Populus nigra] | |||||
| JMFN046G11 | Sequence | 597 | 006176 (8) | gb|ACS92519.1| | 8e-12 | Kunitz-type protease inhibitor KPI-D8 [Populus trichocarpa x Populus nigra] | |||||
| JMSF004I01 | Sequence | 412 | 006176 (8) | gb|ACS92519.1| | 2e-06 | Kunitz-type protease inhibitor KPI-D8 [Populus trichocarpa x Populus nigra] | 429 | 006176 (8) | |||
| JMSF004I03 | Sequence | 360 | 006176 (8) | ||||||||
| JMSF045C11 | Sequence | 771 | 006176 (8) | gb|ACS92519.1| | 2e-11 | Kunitz-type protease inhibitor KPI-D8 [Populus trichocarpa x Populus nigra] | 768 | 006176 (8) | gb|ACO40080.1| | 2e-09 | kunitz trypsin inhibitor 4, partial [Populus balsamifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF004I01- GCATTCATCTTAT
____________________________________________________________
consensus GCATTCATCTTAT
. : . : . : . : . : . :
rJMSF004I03- AAAGCATAATTCCATAAATATAATACGGAAGATATTAAGGATACAGAANC
rJMSF004I01- TATAAATTAAAAAGCATAATTCCATAAATATAATAC-GAAGATATTAAGGATACAGAACC
____________________________________________________________
consensus TATAAATTAAAAAGCATAATTCCATAAATATAATACGGAAGATATTAAGGATACAGAACC
. : . : . : . : . : . :
rJMSF004I03- CTTAATTAGCTTATTGAGAGTACGGATCGAGCTGCTGTCCTATATGTGCGTGGGATATAT
rJMSF004I01- CTTAATTAGCTTATTGAGAGTACAGATCGAGCTGCTGTCCTATATATGCATGGCATATAT
____________________________________________________________
consensus CTTAATTAGCTTATTGAGAGTACGGATCGAGCTGCTGTCCTATATGTGCGTGGGATATAT
. : . : . : . : . : . :
rJMSF004I03- GCAGCAGACAANTTATTACATACGTACATACATAGATGTCCCCGACAAAACGTAACCTGC
rJMSF004I01- GCAGCAGACAAATTATTACATACGTACATACATAGATGTCCCCGACAAAACGTAACCTGC
____________________________________________________________
consensus GCAGCAGACAAATTATTACATACGTACATACATAGATGTCCCCGACAAAACGTAACCTGC
. : . : . : . : . : . :
rJMSF004I03- NGAATATACCACTGCACACGTACTACATATATTCTTCACTGTTGTAGCTACAGTGAATCT
rJMSF004I01- AGAATATACCACTGCACACGTACTACATATATTCTTCACTGTTGTAGCTACAGTGAATCT
JMSF045C11+ GAATATACCACTGCACACGTACTACATATATTCTTCACTGTTGTAGCTACAGTGAATCT
____________________________________________________________
consensus AGAATATACCACTGCACACGTACTACATATATTCTTCACTGTTGTAGCTACAGTGAATCT
. : . : . : . : . : . :
rJMSF004I03- AGCAGGTTGCCGATTGCGACGGTAGTGGAATTAGTTGTATCAGCCTTGCCGAGGAAAAAC
rJMSF004I01- AGCAGGTTGCCGATTGCGACGGTAGTGGAATTAGTTGTAGCAGCCTTGCCGAGGAAAAAC
rJMSF045C11- AGCCTTGCCGAGGAAAAAC
JMFN028A20+ TGTAGCAGCCTTGCCGAGGAAAAAC
JMSF045C11+ AGCAGGTTGCCGATTGCGACGGTAGTGGAATTAGTTGTAGCAGCCTTGCCGAGGAAAAAC
____________________________________________________________
consensus AGCAGGTTGCCGATTGCGACGGTAGTGGAATTAGTTGTAGCAGCCTTGCCGAGGAAAAAC
. : . : . : . : . : . :
rJMSF004I03- TCGACGGGCAGGACGNCCGACCCGATACCCAGCCGANTAGATCCNAATTCCGATACGATC
rJMSF004I01- TCGACGGGCAGGACGTCCGACCCGATACCCAGCCGATTAAATCCAAATTCCGATACGATC
JMFN045B03+ GACGGGCAGGACGTCCGACCCGATACCCAGCCGATTAAATCCAAATTCCGATACGATC
rJMSF045C11- TCGACGGGCAGGACGTCCGACCCGATACCCAGCCGATTAAATCCAAATTCCGATACGATC
JMFN028A20+ TCGACGGGCAGGACGTCCGACCCGATACCCAGCCGATTAAATCCAAATTCCGATACGATC
JMSF045C11+ TCGACGGGCAGGACGTCCGACCCGATACCCAGCCGATTAAATCCAAATTCCGATACGATC
JMFN046G11+ ACGGGCAGGACGTCCGACCCGATACCCAGCCGATTAAATCCAAATTCCGATACGATC
____________________________________________________________
consensus TCGACGGGCAGGACGTCCGACCCGATACCCAGCCGATTAAATCCAAATTCCGATACGATC
. : . : . : . : . : . :
rJMSF004I03- CCAACGCCAT
rJMSF004I01- CCAACGCCATAGCAAAGGGGAAAAGGTGGTAGTATGCATCCGGTGATCTTGTACCCC
JMFN045B03+ CCAACGCCATAGCAAAGGGGAAAAGGTGGTAGTATGCATCCGGTGATCTTGTACCCCAGC
rJMSF045C11- CCAACGCCATAGCAAAGGGGAAAAGGTGGTAGTATGCATCCGGTGATCTTGTACCCCAGC
JMFN028A20+ CCAACGCCATAGCAAAGGGGAAAAGGTGGTAGTATGCATCCGGTGATCTTGTACCCCAGC
JMSF045C11+ CCAACGCCATAGCAAAGGGGAAAAGGTGGTAGTATGCATCCGGTGATCTTGTACCCCAGC
JMFN046G11+ CCAACGCCATAGCAAAGGGGAAAAGGTGGTAGTATGCATCCGGTGATCTTGTACCCCAGC
____________________________________________________________
consensus CCAACGCCATAGCAAAGGGGAAAAGGTGGTAGTATGCATCCGGTGATCTTGTACCCCAGC
. : . : . : . : . : . :
JMFN045B03+ ACCGCTTTCTGGATCGTAAATTCGGTAGCGAGAGTCTTGGCACCTATAGCGACGAAATTC
rJMSF045C11- ACCGCTTTCTGGATCGTAAATTCGGTAGCGAGAGTCTTGGCACCTATAGCGACGAAATTC
JMFN028A20+ ACCGCTTTCTGGATCGTAAATTCGGTAGCGAGAGTCTTGGCACCTATAGCGACGAAATTC
JMSF045C11+ ACCGCTTTCTGGATCGTAAATTCGGTAGCGAGAGTCTTGGCACCTATAGCGACGAAATTC
JMFN046G11+ ACCGCTTTCTGGATCGTAAATTCGGTAGCGAGAGTCTTGGCACCTATAGCGACGAAATTC
____________________________________________________________
consensus ACCGCTTTCTGGATCGTAAATTCGGTAGCGAGAGTCTTGGCACCTATAGCGACGAAATTC
. : . : . : . : . : . :
JMFN045B03+ TTGCCGGCGATTCCGTCATCCTTTAGGTACCAGAAGCTAGTTTCGTTGCTACAGTTTCCA
rJMSF045C11- TTGCCGGCGATTCCGTCATCCTTTAGGTACCAGAAGCTAGTTTCGTTGCTACAGTTTCCA
JMFN028A20+ TTGCCGGCGATTCCGTCATCCTTTAGGTACCAGAAGCTAGTTTCGTTGCTACAGTTTCCA
JMSF045C11+ TTGCCGGCGATTCCGTCATCCTTTAGGTACCAGAAGCTAGTTTCGTTGCTACAGTTTCCA
JMSF004I01+ TCCA
JMFN046G11+ TTGCCGGCGATTCCGTCATCCTTTAGGTACCAGAAGCTAGTTTCGTTGCTACAGTTTCCA
____________________________________________________________
consensus TTGCCGGCGATTCCGTCATCCTTTAGGTACCAGAAGCTAGTTTCGTTGCTACAGTTTCCA
. : . : . : . : . : . :
JMFN045B03+ GAGCCAACGGCGCCGGAAAACTCAATATGGTAGGGAGTGTTCTCTCGAACCACGGTGTCC
rJMSF045C11- GAGCCAACGGCGCCGGAAAACTCAATATGGTAGGGAGTGTTCTCTCGAACCACGGTGTCC
JMFN028A20+ GAGCCAACGGCGCCGGAAAACTCAATATGGTAGGGAGTGTTCTCTCGAACCACGGTGTCC
JMSF045C11+ GAGCCAACGGCGCCGGAAAACTCAATATGGTAGGGAGTGTTCTCTCGAACCACGGTGTCC
JMSF004I01+ GAGCCAACGGCGCCGGAAAACTCAATATGGTAGGGAGTGTTCTCTCGAACCACGGTGTCC
JMFN046G11+ GAGCCAACGGCGCCGGAAAACTCAATATGGTAGGGAGTGTTCTCTCGAACCACGGTGTCC
____________________________________________________________
consensus GAGCCAACGGCGCCGGAAAACTCAATATGGTAGGGAGTGTTCTCTCGAACCACGGTGTCC
. : . : . : . : . : . :
JMFN045B03+ TCCGTGGAGTTGACGACGGAGGAGAAGGTGACAGGCAGGCCGCGGGGGTCGTCGTAGTAG
rJMSF045C11- TCCGTGGAGTTGACGACGGAGGAGAAGGTGACAGGCAGGCCGCGGGGGTCGTCGTAGTAG
JMFN028A20+ TCCGTGGAGTTGACGACGGAGGAGAAGGTGACAGGCAGGCCGCGGGGGTCGTCGTAGTAG
JMSF045C11+ TCCGTGGAGTTGACGACGGAGGAGAAGGTGACAGGCAGGCCGCGGGGGTCGTCGTAGTAG
JMSF004I01+ TCCGTGGAGTTGACGACGGAGGAGAAGGTGACAGGCAGGCCGCGGGGGTCGTCGTAGTAG
JMFN046G11+ TCCGTGGAGTTGACGACGGAGGAGAAGGTGACAGGCAGGCCGCGGGGGTCGTCGTAGTAG
____________________________________________________________
consensus TCCGTGGAGTTGACGACGGAGGAGAAGGTGACAGGCAGGCCGCGGGGGTCGTCGTAGTAG
. : . : . : . : . : . :
JMFN045B03+ GAGGGGCATTGGATGATGTCTTTGGGACACTTTTCATTGTCCACCAGGCACACCCCAAGT
rJMSF045C11- GAGGGGCATTGGATGATGTCTTTGGGACACTTTTCATTGTCCACCAGGCACACCCCAAGT
JMFN028A20+ GAGGGGCATTGGATGATGTCTTTGGGACACTTTTCATTGTCCAACAGGCACACCCCAAGT
JMSF045C11+ GAGGGGCATTGGATGATGTCTTTGGGACACTTTTCATTGTCCACCAGGCACACCCCAAGT
JMSF004I01+ GAGGGGCATTGGATGATGTCTTTGGGACACTTTTCATTGTCCACCAGGCACACCCCAAGT
JMFN046G11+ GAGGGGCATTGGATGATGTCTTTGGGACACTTTTCATTGTCCACCAGGCACACCCCAAGT
____________________________________________________________
consensus GAGGGGCATTGGATGATGTCTTTGGGACACTTTTCATTGTCCACCAGGCACACCCCAAGT
. : . : . : . : . : . :
JMFN045B03+ GGTGGGAACAGAGTGAAGGAAATATAGTACGACTCGCCCAGCTTCACCTCCTTTCCTTCC
rJMSF045C11- GGTGGGAACAGAGTGAAGGAAATATAGTACGACTCGCCCAGCTTCACCTCCTTTCCTTCC
JMFN028A20+ GGTGGGAACAGAGTGAAGGAAATATAGTACGACTCGCCCAGCTTCACCTCCTTTCCTTCC
JMSF045C11+ GGTGGGAACAGAGTGAAGGAAATATAGTACGACTCGCCCAGCTTCACCTCCTTTCCTTCC
JMSF004I01+ GGTGGGAACAGAGTGAAGGAAATATAGTACGACTCGCCCAGCTTCACCTCCTTTCCTTCC
JMFN046G11+ GGTGGGAACAGAGTGAAGGAAATATAGTACGACTCGCCCAGCTTCACCTCCTTTCCTTCC
____________________________________________________________
consensus GGTGGGAACAGAGTGAAGGAAATATAGTACGACTCGCCCAGCTTCACCTCCTTTCCTTCC
. : . : . : . : . : . :
JMFN045B03+ ACGCTCACTACCGGCGGTAAAGGAAACTGCCTTACTGAAAAGGCAATGAAGGGGAGGAAC
rJMSF045C11- ACGCTCACTACCGGCGGTAAAGGAAACTGCC
JMFN028A20+ ACG
JMSF045C11+ ACGCTCACTACCGGCGGTAAAGGAAACTGCCTTACTGAAAAGGCAATGAAGGGGAGGAAC
JMSF004I01+ ACGCTCACTACCGGCGGTAAAGGAAACTGCCTTACTGAAAAGGCAATGAAGGGGAGGAAC
JMFN046G11+ ACGCTCACTACCGGCGGTAAAGGAAACTGCCTTACTGAAAAGGCAATGAAGGGGAGGAAC
____________________________________________________________
consensus ACGCTCACTACCGGCGGTAAAGGAAACTGCCTTACTGAAAAGGCAATGAAGGGGAGGAAC
. : . : . : . : . : . :
JMFN045B03+ GATAAGGAAAACAAAAGAGATAATGCAGGCAAGAGCTGATGAAGAGT
JMSF045C11+ GATAAGGAAAACAAAAGAGATAATGCAGGCAAGAGCTGATGAAGAGT
JMSF004I01+ GATAAGGAAAACAAAAGAGATAATGCAGGCAAGAGCTGATGAAGAGT
JMFN046G11+ GATAAGGAAAACAAAAGAGATAATGCAGGCAAGAGCTGATGAAGAGTAGTCTTCATTTTG
____________________________________________________________
consensus GATAAGGAAAACAAAAGAGATAATGCAGGCAAGAGCTGATGAAGAGTAGTCTTCATTTTG