| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN011A16 | Sequence | 607 | 006171 (7) | ref|XP_002534013.1| | 2e-21 | transcription factor, putative [Ricinus communis] gb|EEF28371.1| transcription f | |||||
| JMFN014N20 | Sequence | 576 | 006171 (7) | gb|KJB33554.1| | 1e-21 | hypothetical protein B456_006G017300 [Gossypium raimondii] | |||||
| JMFN018H07 | Sequence | 627 | 006171 (7) | ref|XP_002534013.1| | 2e-21 | transcription factor, putative [Ricinus communis] gb|EEF28371.1| transcription f | |||||
| JMFN032H13 | Sequence | 600 | 006171 (7) | ref|XP_002534013.1| | 2e-21 | transcription factor, putative [Ricinus communis] gb|EEF28371.1| transcription f | |||||
| JMFN044D22 | Sequence | 609 | 006171 (7) | ref|XP_002534013.1| | 3e-21 | transcription factor, putative [Ricinus communis] gb|EEF28371.1| transcription f | |||||
| JMFN044H02 | Sequence | 623 | 006171 (7) | ref|XP_002534013.1| | 1e-21 | transcription factor, putative [Ricinus communis] gb|EEF28371.1| transcription f | |||||
| JMFN045L15 | Sequence | 631 | 006171 (7) | ref|XP_002534013.1| | 2e-21 | transcription factor, putative [Ricinus communis] gb|EEF28371.1| transcription f | |||||
This contig is upended
. : . : . : . : . : . :
JMFN018H07+ GCATCACATCCATGNTATA
____________________________________________________________
consensus GCATCACATCCATGNTATA
. : . : . : . : . : . :
JMFN011A16+ ATAAGATTTTGTATTTATATATATATATATCAAACCCCAAAACATTACAACAACGTAA
JMFN018H07+ ATATAAGATTTTGTATTTATATATATATATATCAAACCCCAAAACATTACAACAACGTAA
JMFN014N20+ ATTTTGTATTTATATATATATATATCAAACCCCAAAACATTACAACAACGTAA
JMFN044D22+ ATAAGATTTTGTATTTATATATATATATATCAAACCCCAAAACATTACAACAACGTAA
____________________________________________________________
consensus ATATAAGATTTTGTATTTATATATATATATATCAAACCCCAAAACATTACAACAACGTAA
. : . : . : . : . : . :
JMFN011A16+ CATAGTCTTCTGATCTCCAAAGCCACATATATAAGTATATATATATGAGTTTAACCAGAC
JMFN018H07+ CATAGTCTTCTGATCTCCAAAGCCACATATATAAGTATATATATATGAGTTTAACCAGAC
JMFN014N20+ CATAGTCTTCTGATCTCCAAAGCCACATATATAAGTATATATATATGAGTTTAACCAGAC
JMFN044D22+ CATAGTCTTCTGATCTCCAAAGCCACATATATAAGTATATATATATGAGTTTAACCAGAC
____________________________________________________________
consensus CATAGTCTTCTGATCTCCAAAGCCACATATATAAGTATATATATATGAGTTTAACCAGAC
. : . : . : . : . : . :
JMFN011A16+ ACCCAAAACCGAAAAAATCTTGTAGCTAATACTACAGCCACAAATACATACACACTAACA
JMFN018H07+ ACCCAAAACCGAAAAAATCTTGTAGCTAATACTACAGCCACAAATACATACACACTAACA
JMFN014N20+ ACCCAAAACCGAAAAAATCTTGTAGCTAATACTACAGCCACAAATACATACACACTAACA
JMFN044D22+ ACCCAAAACCGAAAAAATCTTGTAGCTAATACTACAGCCACAAATACATACACACTAACA
JMFN032H13- TTGTAGCTAATACTACAGCCACAAATACATACACACTAACA
JMFN044H02- CCACAAATACATACACACTAACA
____________________________________________________________
consensus ACCCAAAACCGAAAAAATCTTGTAGCTAATACTACAGCCACAAATACATACACACTAACA
. : . : . : . : . : . :
JMFN011A16+ CACATAAACTTACTATATATATATATATATATATATATATATATATATATATATATATAT
JMFN018H07+ CACATAAACTTACTATATATATATATATATATATATATATATATATATATATATATATAT
JMFN014N20+ CACATAAACTTACTATATATATATATATATATATATATATATATATATATATATATATAT
JMFN044D22+ CACATAAACTTACTATATATATATATATATATATATATATATATATATATATATATATAT
JMFN045L15+ TACTATATATATATATATATATATATATATATATATATATATATATATAT
JMFN032H13- CACATAAACTTACTATATATATATATATATATATATATATATATATATATATATATATAT
JMFN044H02- CACATAAACTTACTATATATATATATATATATATATATATATATATATATATATATATAT
____________________________________________________________
consensus CACATAAACTTACTATATATATATATATATATATATATATATATATATATATATATATAT
. : . : . : . : . : . :
JMFN011A16+ CATATCTACGCTGCATTTGAAGAGGAGACGTCGTTGAGGACTTCATTAGCTTGAACTTCC
JMFN018H07+ CATATCTACGCTGCATTTGAAGAGGAGACGTCGTTGAGGACTTCATTAGCTTGAACTTCC
JMFN014N20+ CATATCTACGCTGCATTTGAAGAGGAGACGTCGTTGAGGACTTCATTAGCTTGAACTTCC
JMFN044D22+ CATATCTACGCTGCATTTGAAGAGGAGACGTCGTTGAGGACTTCATTAGCTTGAACTTCC
JMFN045L15+ CATATCTACGCTGCATTTGAAGAGGAGACGTCGTTGAGGACTTCATTAGCTTGAACTTCC
JMFN032H13- CATATCTACGCTGCATTTGAAGAGGAGACGTCGTTGAGGACTTCATTAGCTTGAACTTCC
JMFN044H02- CATATCTACGCTGCATTTGAAGAGGAGACGTCGTTGAGGACTTCATTAGCTTGAACTTCC
____________________________________________________________
consensus CATATCTACGCTGCATTTGAAGAGGAGACGTCGTTGAGGACTTCATTAGCTTGAACTTCC
. : . : . : . : . : . :
JMFN011A16+ CTCCTGTGGAAGTTGCGGTGGCAGCCGCAGGCGGCGCACGTGAGGGCGGCGGCGCCGCTC
JMFN018H07+ CTCCTGTGGAAGTTGCGGTGGCAGCCGCAGGCGGCGCACGTGAGGGCGGCGGCGCCGCTC
JMFN014N20+ CTCCTGTGGAAGTTGCGGTGGCAGCCGCAGGCGGCGCACGTGAGGGCGGCGGCGCCGCTC
JMFN044D22+ CTCCTGTGGAAGTTGCGGTGGCAGCCGCAGGCGGCGCACGTGAGGGCGGCGGCGCCGCTC
JMFN045L15+ CTCCTGTGGAAGTTGCGGTGGCAGCCGCAGGCGGCGCACGTGAGGGCGGCGGCGCCGCTC
JMFN032H13- CTCCTGTGGAAGTTGCGGTGGCAGCCGCAGGCGGCGCACGTGAGGGCGGCGGCGCCGCTC
JMFN044H02- CTCCTGTGGAAGTTGCGGTGGCAGCCGCAGGCGGCGCACGTGAGGGCGGCGGCGCCGCTC
____________________________________________________________
consensus CTCCTGTGGAAGTTGCGGTGGCAGCCGCAGGCGGCGCACGTGAGGGCGGCGGCGCCGCTC
. : . : . : . : . : . :
JMFN011A16+ CCTTCTTCCCCGCTCGGCATGAACTCCCGGCAGCCGTCCACCGCGTACCCCCCTACGCTG
JMFN018H07+ CCTTCTTCCCCGCTCGGCATGAACTCCCGGCAGCCGTCCACCGCGTACCCCCCTACGCTG
JMFN014N20+ CCTTCTTCCCCGCTCGGCATGAACTCCCGGCAGCCGTCCACCGCGTACCCCCCTACGCTG
JMFN044D22+ CCTTCTTCCCCGCTCGGCATGAACTCCCGGCAGCCGTCCACCGCGTACCCCCCTACGCTG
JMFN045L15+ CCTTCTTCCCCGCTCGGCATGAACTCCCGGCAGCCGTCCACCGCGTACCCCCCTACGCTG
JMFN032H13- CCTTCTTCCCCGCTCGGCATGAACTCCCGGCAGCCGTCCACCGCGTACCCCCCTACGCTG
JMFN044H02- CCTTCTTCCCCGCTCGGCATGAACTCCCGGCAGCCGTCCACCGCGTACCCCCCTACGCTG
____________________________________________________________
consensus CCTTCTTCCCCGCTCGGCATGAACTCCCGGCAGCCGTCCACCGCGTACCCCCCTACGCTG
. : . : . : . : . : . :
JMFN011A16+ GCGGCGTGGTTCTTCTGGCACTCCCCGTACCGGATTGTCCTCGCCGCGAACGACGACGAA
JMFN018H07+ GCGGCGTGGTTCTTCTGGCACTCCCCGTACCGGATTGTCCTCGCCGCGAACGACGACGAA
JMFN014N20+ GCGGCGTGGTTCTTCTGGCACTCCCCGTACCGGATTGTCCTCGCCGCGAACGACGACGAA
JMFN044D22+ GCGGCGTGGTTCTTCTGGCACTCCCCGTACCGGATTGTCCTCGCCGCGAACGACGACGAA
JMFN045L15+ GCGGCGTGGTTCTTCTGGCACTCCCCGTACCGGATTGTCCTCGCCGCGAACGACGACGAA
JMFN032H13- GCGGCGTGGTTCTTCTGGCACTCCCCGTACCGGATTGTCCTCGCCGCGAACGACGACGAA
JMFN044H02- GCGGCGTGGTTCTTCTGGCACTCCCCGTACCGGATTGTCCTCGCCGCGAACGACGACGAA
____________________________________________________________
consensus GCGGCGTGGTTCTTCTGGCACTCCCCGTACCGGATTGTCCTCGCCGCGAACGACGACGAA
. : . : . : . : . : . :
JMFN011A16+ TTTGCAGAGCTCTGCGAAGATTCCCCTCTCCTCACAACCACTTTGTGCCTTTTCATTTCT
JMFN018H07+ TTTGCAGAGCTCTGCGAAGATTCCCCTCTCCTCACAACCACTTTGTGCCTTTTCATTTCT
JMFN014N20+ TTTGCAGAGCTCTGCGAAGATTCCCCTCTCCTCACAACCACTTTGTGCCTTTTCATTTCT
JMFN044D22+ TTTGCAGAGCTCTGCGAAGATTCCCCTCTCCTCACAACCACTTTGTGCCTTTTCATTTCT
JMFN045L15+ TTTGCAGAGCTCTGCGAAGATTCCCCTCTCCTCACAACCACTTTGTGCCTTTTCATTTCT
JMFN032H13- TTTGCAGAGCTCTGCGAAGATTCCCCTCTCCTCACAACCACTTTGTGCCTTTTCATTTCT
JMFN044H02- TTTGCAGAGCTCTGCGAAGATTCCCCTCTCCTCACAACCACTTTGTGCCTTTTCATTTCT
____________________________________________________________
consensus TTTGCAGAGCTCTGCGAAGATTCCCCTCTCCTCACAACCACTTTGTGCCTTTTCATTTCT
. : . : . : . : . : . :
JMFN011A16+ TGATGAGTTGTTATGTTATGGAAGGATGATGATGATGATGTTGATGAGATGAGAGGATTG
JMFN018H07+ TGATGAGTTGTTATGTTATGGAAGGATGATGATGATGATGTTGATGAGATGAGAGGATTG
JMFN014N20+ TGATGAGTTGTTATGTTATGGAAGGATGATGATGATGATGTTG
JMFN044D22+ TGATGAGTTGTTATGTTATGGAAGGATGATGATGATGATGTTGATGAGATGAGAGGATTG
JMFN045L15+ TGATGAGTTGTTATGTTATGGAAGGATGATGATGATGATGTTGATGAGATGAGAGGATTG
JMFN032H13- TGATGAGTTGTTATGTTATGGAAGGATGATGATGATGATGTTGATGAGATGAGAGGATTG
JMFN044H02- TGATGAGTTGTTATGTTATGGAAGGATGATGATGATGATGTTGATGAGATGAGAGGATTG
____________________________________________________________
consensus TGATGAGTTGTTATGTTATGGAAGGATGATGATGATGATGTTGATGAGATGAGAGGATTG
. : . : . : . : . : . :
JMFN011A16+ AGAAGA
JMFN018H07+ AGAAGAGA
JMFN044D22+ AGAAGAGAAG
JMFN045L15+ AGAAAAGAAG
JMFN032H13- AGAAGAGAAGATTTCGTCCAG
JMFN044H02- AGAAGAGAAGATTTCGTCCAGCGCAGCTGAAGGGTCTGAAGTAAGTATTGTATTTTATAA
____________________________________________________________
consensus AGAAGAGAAGATTTCGTCCAGCGCAGCTGAAGGGTCTGAAGTAAGTATTGTATTTTATAA
. : . : . : . : . : . :
JMFN044H02- ATTTGTATATTAAAAGGGCAATTATATCGTGGACTAGGACCTACACATCATTGTGGACTC
____________________________________________________________
consensus ATTTGTATATTAAAAGGGCAATTATATCGTGGACTAGGACCTACACATCATTGTGGACTC
. : . : . : . : . : . :
JMFN044H02- TGAATCAAACGACGTCGTTCGATATGTAAGTTTTAACAGATTTCGTAACTTTCTATTTCT
____________________________________________________________
consensus TGAATCAAACGACGTCGTTCGATATGTAAGTTTTAACAGATTTCGTAACTTTCTATTTCT