Contig 006169:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041M14Sequence631007456 (5)emb|CDO97109.1|2e-69unnamed protein product [Coffea canephora]611006169 (3)emb|CDO97108.1|4e-54unnamed protein product [Coffea canephora]
JMFN043D09Sequence564006169 (3)ref|XP_002281201.1|2e-79PREDICTED: allene oxide synthase-like [Vitis vinifera]
JMFS040A05Sequence604006169 (3)emb|CDO97108.1|9e-48unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS040A05+                                   AAATGTGAGTATTTATTCAAGATGTGTTACAAAAGT
rJMFF041M14-                              ATGAAAATGTGAGTATTTATTCAAGATGTGTTACAAAAGT
                      ____________________________________________________________
consensus                                 ATGAAAATGTGAGTATTTATTCAAGATGTGTTACAAAAGT
 
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JMFS040A05+           GGTGGCCATGCCAACAAGCTCAATTATTGCACAACCTTATCATAGACTTATAGGAACAAC
rJMFF041M14-          GGTGGCCATGCCAACAAGCTCAATTATTGCACAACCTTATCATAGACTTATAGGAACAAC
                      ____________________________________________________________
consensus             GGTGGCCATGCCAACAAGCTCAATTATTGCACAACCTTATCATAGACTTATAGGAACAAC
 
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JMFS040A05+           GAAATAAAAATATGAAGATTTTTAAGGTTGTTTATATACCAAACACAAAAAACATTGAAT
rJMFF041M14-          GAAATAAAAATATGAAGATTTTTAAGGTTGTTTATATACCAAACACAAAAAACATTGAAT
                      ____________________________________________________________
consensus             GAAATAAAAATATGAAGATTTTTAAGGTTGTTTATATACCAAACACAAAAAACATTGAAT
 
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JMFS040A05+           GGTCCACCAAAAACAGCTCACCAAAACCCAAGTTTCACTTTGCCGACGTGGCTTTGGTCA
rJMFF041M14-          GGTCCACCAAAAACAGCTCACCAAAACCCAAGTTTCACTTTGCCGACGTGGCTTTGGTCA
                      ____________________________________________________________
consensus             GGTCCACCAAAAACAGCTCACCAAAACCCAAGTTTCACTTTGCCGACGTGGCTTTGGTCA
 
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JMFS040A05+           ACGACGTGAAAGTCGTCTTTGACCCAAGCAAGAACTTCTCCGCCTCGCAGGTGAACGTAT
rJMFF041M14-          ACGACGTGAAAGTCGTCTTTGACCCAAGCAAGAACTTCTCCGCCTCGCAGGTGAACGTAT
                      ____________________________________________________________
consensus             ACGACGTGAAAGTCGTCTTTGACCCAAGCAAGAACTTCTCCGCCTCGCAGGTGAACGTAT
 
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JMFS040A05+           CGTAGCGGAGGAAGAACTGCGCCACCACCAGCCGCGACAGCAACACCACCAGATCTTTCC
rJMFF041M14-          CGTAGCGGAGGAAGAACTGCGCCACCACCAGCCGCGACAGCAACACCACCAGATCTTTCC
JMFN043D09+                                               ACAGCAACACCACCAGATCTTTCC
                      ____________________________________________________________
consensus             CGTAGCGGAGGAAGAACTGCGCCACCACCAGCCGCGACAGCAACACCACCAGATCTTTCC
 
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JMFS040A05+           CCGGACACTGCTTGTCGTTCGCCGTCGGGCTGTCGGTCTCCCGGCCGTTCGACCAGTACA
rJMFF041M14-          CCGGACACTGCTTGTCGTTCGCCGTCGGGCTGTCGGTCTCCCGGCCGTTCGACCAGTACA
JMFN043D09+           CCGGACACTGCTTGTCGTTCGCCGTCGGGCTGTCGGTCTCCCGGCCGTTCGACCAGTACA
                      ____________________________________________________________
consensus             CCGGACACTGCTTGTCGTTCGCCGTCGGGCTGTCGGTCTCCCGGCCGTTCGACCAGTACA
 
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JMFS040A05+           CGTTCTTCACCAGCTTCTGGCCTTCCGTCCCCACGAACCGGTCCGGCACGAACTTCCCGG
rJMFF041M14-          CGTTCTTCACCAGCTTCTGGCCTTCCGTCCCCACGAACCGGTCCGGCACGAACTTCCCGG
JMFN043D09+           CGTTCTTCACCAGCTTCTGGCCTTCCGTCCCCACGAACCGGTCCGGCACGAACTTCCCGG
                      ____________________________________________________________
consensus             CGTTCTTCACCAGCTTCTGGCCTTCCGTCCCCACGAACCGGTCCGGCACGAACTTCCCGG
 
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JMFS040A05+           CGTCGGCGAAAACCAGCTCGTCTTTCGTGGCGAACGGCTGGTATCCGAAGATCATCTCGC
rJMFF041M14-          CGTCGGCGAAAACCAGCTCGTCTTTCGTGGCGAACGGCTGGTATCCGAAGATCATCTCGC
JMFN043D09+           CGTCGGCGAAAACCAGCTCGTCTTTCGTGGCGAACGGCTGGTATCCGAAGATCATCTCGC
                      ____________________________________________________________
consensus             CGTCGGCGAAAACCAGCTCGTCTTTCGTGGCGAACGGCTGGTATCCGAAGATCATCTCGC
 
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JMFS040A05+           CTTTCTTAATCAAATAGAATTTATTGTCGCTGCTGCGGACGAGGAGATCCTCCTTCGCCT
rJMFF041M14-          CTTTCTTAATCAAATAGAATTTATTGTCGCTGCTGCGGACGAGGAGATCCTCCTTCGCCT
JMFN043D09+           CTTTCTTAATCAAATAGAATTTATTGTCGCTGCTGCGGACGAGGAGATCCTCCTTCGCCT
                      ____________________________________________________________
consensus             CTTTCTTAATCAAATAGAATTTATTGTCGCTGCTGCGGACGAGGAGATCCTCCTTCGCCT
 
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JMFS040A05+           TGGCGT                                                      
rJMFF041M14-          TGGCGT                                                      
JMFN043D09+           TGGCGTACTGGAACGCCACCGGCGGCTCGATTCGCAGAGCCTCCCAGACGACGGACTTCG
                      ____________________________________________________________
consensus             TGGCGTACTGGAACGCCACCGGCGGCTCGATTCGCAGAGCCTCCCAGACGACGGACTTCG
 
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JMFN043D09+           TCAGCGGCATTTTCTCAATCGCCGCCGCGGTGAGGTCGCCTTCCGCGGCGACGGCGCCGC
                      ____________________________________________________________
consensus             TCAGCGGCATTTTCTCAATCGCCGCCGCGGTGAGGTCGCCTTCCGCGGCGACGGCGCCGC
 
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JMFN043D09+           GGATCTCGCTCGCCAGCTGGCTGTGCAGGCTGGGCCCCGCCGCGTCGATCCACTTGAACA
                      ____________________________________________________________
consensus             GGATCTCGCTCGCCAGCTGGCTGTGCAGGCTGGGCCCCGCCGCGTCGATCCACTTGAACA
 
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JMFN043D09+           GAGCGGGGAAGAAGACCTTGAAGCCGCCGTAGGAGTTGAAGCCGTTGAGGAAAATGATGT
                      ____________________________________________________________
consensus             GAGCGGGGAAGAAGACCTTGAAGCCGCCGTAGGAGTTGAAGCCGTTGAGGAAAATGATGT
 
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JMFN043D09+           TGTGGCAGGCCTCGTCTCTCTGGAGCCCGGCGCTCTCGGCGTCGTCGAGGATGGATCCCA
                      ____________________________________________________________
consensus             TGTGGCAGGCCTCGTCTCTCTGGAGCCCGGCGCTCTCGGCGTCGTCGAGGATGGATCCCA