Contig 006168:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN028A24Sequence494006168 (2)ref|XP_006355829.1|2e-27PREDICTED: probable protein phosphatase 2C 47-like [Solanum tuberosum]
JMFN042L17Sequence618006168 (2)ref|XP_006355829.1|1e-105PREDICTED: probable protein phosphatase 2C 47-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFN028A24+                                 GGACCAGAATGTATGTTAATTGTATGTATCTTATTATG
                      ____________________________________________________________
consensus                                   GGACCAGAATGTATGTTAATTGTATGTATCTTATTATG
 
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JMFN028A24+           TACTGTACATCAAGACTCAAGAGAAATGGGTATCTAAGCTACGCAGCTGCCTACCCCCTT
                      ____________________________________________________________
consensus             TACTGTACATCAAGACTCAAGAGAAATGGGTATCTAAGCTACGCAGCTGCCTACCCCCTT
 
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JMFN028A24+           CCCCCATAGCCAAAAATACTACAGGAATTGAATTATTACACATAACCAATTCAGATGTAT
                      ____________________________________________________________
consensus             CCCCCATAGCCAAAAATACTACAGGAATTGAATTATTACACATAACCAATTCAGATGTAT
 
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JMFN028A24+           ACACTCCTCCAAGTCCAAGTAGAAGCACCTAACAAAATTGCTACATGCAAACAGTTTTGC
JMFN042L17+                                                     ACATGCAAACAGTTTTGC
                      ____________________________________________________________
consensus             ACACTCCTCCAAGTCCAAGTAGAAGCACCTAACAAAATTGCTACATGCAAACAGTTTTGC
 
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JMFN028A24+           CCTCCCCAATGGCGAAATAATAAGGGCAATATTTAAAATTTGTCTACACTCAGCTGCTGC
JMFN042L17+           CCTCCNCAATGGCGAAATAATAAGGGCAATATTTAAAATTTGTCTACACTCAGCTGCTGC
                      ____________________________________________________________
consensus             CCTCCCCAATGGCGAAATAATAAGGGCAATATTTAAAATTTGTCTACACTCAGCTGCTGC
 
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JMFN028A24+           CATTCCCATTTAGCAAGCTTCGTAGGCTGCCTATGGCTTCCGCAGATAAGTTACAGCACC
JMFN042L17+           CATTCCCATTTAGCAAGCTTCGTAGGCTGCCTATGGCTTCCGCAGATAAGTTACAGCACC
                      ____________________________________________________________
consensus             CATTCCCATTTAGCAAGCTTCGTAGGCTGCCTATGGCTTCCGCAGATAAGTTACAGCACC
 
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JMFN028A24+           TTAATCTTCGGTTGCGGGTTGGTGATGGCTCGGGATGATCAAAGGACGTAAAACAGACAA
JMFN042L17+           TTAATCTTCGGTTGCGGGTTGGTGATGGCTCGGGATGATCAAAGGACGTAAAACAGACAA
                      ____________________________________________________________
consensus             TTAATCTTCGGTTGCGGGTTGGTGATGGCTCGGGATGATCAAAGGACGTAAAACAGACAA
 
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JMFN028A24+           TTATCACTGTTAGATTATCAAATGTGTTTAAGCGGAGGGCCTCCATGACAAGGTCCTTTG
JMFN042L17+           TTATCACTGTTAGATTATCAAATGTGTTTAAGCGGAGGGCCTCCATGACAAGGTCCTTTG
                      ____________________________________________________________
consensus             TTATCACTGTTAGATTATCAAATGTGTTTAAGCGGAGGGCCTCCATGACAAGGTCCTTTG
 
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JMFN028A24+           CACACTGTTCAGGGTCATCATGCCTTCTCAGCCCTC                        
JMFN042L17+           CACACTGTTCAGGGTCATCATGCCTTCTCAGCCCTCGGCGCACCAGACTAACTGCTTGTT
                      ____________________________________________________________
consensus             CACACTGTTCAGGGTCATCATGCCTTCTCAGCCCTCGGCGCACCAGACTAACTGCTTGTT
 
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JMFN042L17+           GACTTGACATAACATCCCAGATCCCATCACAACCAATTATGAGGAATTCGTCATCCTCAG
                      ____________________________________________________________
consensus             GACTTGACATAACATCCCAGATCCCATCACAACCAATTATGAGGAATTCGTCATCCTCAG
 
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JMFN042L17+           TCAGAAGAATTTGTCTCAATTCAGGCTCTGCAATTAGAGGAGATGGAGATCCACGAGGCA
                      ____________________________________________________________
consensus             TCAGAAGAATTTGTCTCAATTCAGGCTCTGCAATTAGAGGAGATGGAGATCCACGAGGCA
 
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JMFN042L17+           GTTTCATGTCCCAGTCCCCTAATGCCCGCGTCACTGATAGAACACCGTTGAGATAACCAT
                      ____________________________________________________________
consensus             GTTTCATGTCCCAGTCCCCTAATGCCCGCGTCACTGATAGAACACCGTTGAGATAACCAT
 
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JMFN042L17+           CATCAATAAATGCACCCAACTCTTCAACCCGCCTTCTCTCTAATGCATAATTCGGTCTGT
                      ____________________________________________________________
consensus             CATCAATAAATGCACCCAACTCTTCAACCCGCCTTCTCTCTAATGCATAATTCGGTCTGT
 
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JMFN042L17+           GGTCTTGAGACATATCAAATGCCTCTCCTTTCCGGCAAAGAACTGCTCTACAATCTCCCG
                      ____________________________________________________________
consensus             GGTCTTGAGACATATCAAATGCCTCTCCTTTCCGGCAAAGAACTGCTCTACAATCTCCCG