| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007F14 | Sequence | 545 | 006167 (6) | ref|XP_004250933.1| | 1e-103 | PREDICTED: 60S ribosomal protein L12-like [Solanum lycopersicum] ref|XP_00425113 | 598 | 006167 (6) | gb|AAR83868.1| | 1e-97 | 60S ribosomal protein L12 [Capsicum annuum] |
| JMFN005B15 | Sequence | 627 | 006167 (6) | ref|XP_004250933.1| | 4e-108 | PREDICTED: 60S ribosomal protein L12-like [Solanum lycopersicum] ref|XP_00425113 | |||||
| JMFN042J04 | Sequence | 595 | 006167 (6) | ref|XP_004250933.1| | 8e-107 | PREDICTED: 60S ribosomal protein L12-like [Solanum lycopersicum] ref|XP_00425113 | |||||
| JMFN043O07 | Sequence | 631 | 006167 (6) | ref|XP_004250933.1| | 4e-108 | PREDICTED: 60S ribosomal protein L12-like [Solanum lycopersicum] ref|XP_00425113 | |||||
| JMSF038N15 | Sequence | 647 | 003808 (4) | ref|XP_011074783.1| | 8e-86 | PREDICTED: acyl-[acyl-carrier-protein] desaturase 6, chloroplastic [Sesamum ind | 666 | 006167 (6) | ref|XP_011089298.1| | 1e-108 | PREDICTED: 60S ribosomal protein L12 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFN043O07+ TTCAAGAGAGTTTAAGCTTTAACCTCCTAATATCGAAAGTCGTCATT
____________________________________________________________
consensus TTCAAGAGAGTTTAAGCTTTAACCTCCTAATATCGAAAGTCGTCATT
. : . : . : . : . : . :
JMFN005B15+ GGAATCTCCACTTCTCCATCAGCGATCTCTTGCT
rJMFF007F14- GGAATCTCCACTTCTCCATCAGCGATCTCTTGCT
JMFN043O07+ TTCACTCCACCTTCTCTTAGGCTTCTGGAATCTCCACTTCTCCATCAGCGATCTCTTGCT
rJMSF038N15- CTCAGTCCTGAGGGATCTCAACGTCTCCATCAGCAATTTCCTGTT
JMFF007F14+ TCCATCAGCGATCTCTTGCT
JMFN042J04+ GGAAGCTCCACTTCTCCATCAGCGATCTCTTGCT
____________________________________________________________
consensus TTCACTCCACCTTCTCTTAGTCTTGTGGAATCTCCACTTCTCCATCAGCGATCTCTTGCT
. : . : . : . : . : . :
JMFN005B15+ GCAAATCCTTGGGGTCCTTCCCGTCTACAGTGCACCCGACGGATACACAGGTTCCTAGGA
rJMFF007F14- GCAAATCCTTGGGGTCCTTCCCGTCTACAGTGCACCCGACGGATACACAGGTTCCTAGGA
JMFN043O07+ GCAAATCCTTGGGGTCCTTCCCGTCTACAGTGCACCCGACGGATACACAGGTTCCTAGGA
rJMSF038N15- GCAAATCCTTCGGGTCCTTGCCGTCGACGGTGCATCCAACCGATACGCAGGTCCCTAGGA
JMFF007F14+ GCAAATCCTTGGGGTCCTTCCCGTCTACAGTGCACCCGACGGATACACAGGTTCCTAGGA
JMFN042J04+ GCAAATCCTTGGGGTCCTTCCCGTCTACAGTGCACCCGACGGATACACAGGTTCCTAGGA
____________________________________________________________
consensus GCAAATCCTTGGGGTCCTTCCCGTCTACAGTGCACCCGACGGATACACAGGTTCCTAGGA
. : . : . : . : . : . :
JMFN005B15+ TCTCCTTCACGGTGCCAGTCAAGTCCTTGGCCATGGAGCGGGGGCTCATGACCTTAGCGA
rJMFF007F14- TCTCCTTCACGGTGCCAGTCAAGTCCTTGGCCATGGAGCGGGGGCTCATGACCTTAGCGA
JMFN043O07+ TCTCCTTCACGGTGCCAGTCAAGTCCTTGGCCATGGAGCGGGGGCTCATGACCTTAGCGA
rJMSF038N15- TCTCCTTCACGGTGCCGGTCAGGTCCTTGGCCATGGAGCGAGGGCTCATGATCTTAGCAA
JMFF007F14+ TCTCCTTCACGGTGCCAGTCAAGTCCTTGGCCATGGAGCGGGGGCTCATGACCTTAGCGA
JMFN042J04+ TCTCCTTCACGGTGCCAGTCAAGTCCTTGGCCATGAAGCGGGGGCTCATGACCTTAGCGA
____________________________________________________________
consensus TCTCCTTCACGGTGCCAGTCAAGTCCTTGGCCATGGAGCGGGGGCTCATGACCTTAGCGA
. : . : . : . : . : . :
JMFN005B15+ TCTCGATTACGTCATCGAGCGATATGTTGCCGTTGTGCTTAATGTTCTTAGTCTTCTTGC
rJMFF007F14- TCTCGATTACGTCATCGAGCGATATGTTGCCGTTGTGCTTAATGTTCTTAGTCTTCTTGC
JMFN043O07+ TCTCGATTACGTCATCGAGCGATATGTTGCCGTTGTGCTTAATGTTCTTAGTCTTCTTGC
rJMSF038N15- TCTCGATGACGTCATCCAAGGAAATGTTGCCGTTGTGTTTGATGTTCTTCGTCTTCTTCC
JMFF007F14+ TCTCGATTACGTCNTCGAGCGATATGTTGCCGTTGTGCTTAATGTTCTTAGTCTTCTTGC
JMFN042J04+ TCTCGATTACGTCATCGAGCGATATGTTGCCGTTGTGCTTAATGTTCTTAGTCTTCTTGC
____________________________________________________________
consensus TCTCGATTACGTCATCGAGCGATATGTTGCCGTTGTGCTTAATGTTCTTAGTCTTCTTGC
. : . : . : . : . : . :
JMFN005B15+ GGTCGCGCTCGGGCTCCTTGAGCGCCTTGATGACTAGCGCGGCGGCGGAGGGGACCACCG
rJMFF007F14- GGTCGCGCTCGGGCTCCTTGAGCGCCTTGATGACTAGCGCGGCGGCGGAGGGGACCACCG
JMFN043O07+ GGTCGCGCTCGGGCTCCTTGAGCGCCTTGATGACTAGCGCGGCGGCGGAGGGGACCACCG
rJMSF038N15- GGTCACGCTCCGGCTCCTTGAGGGCCTTGATGACAAGGGCGGCGGCGGAGGGGACGACCG
JMFF007F14+ GGTCGCGCTCGGGCTCCTTGAGCGCCTTGATGACTAGCGCGGCGGCGGAGGGGACCACCG
JMFN042J04+ GGTCGCGCTCGGGCTCCTTGAGCGCCTTGATGACTAGCGCGGCGGCGGAGGGGACCACCG
____________________________________________________________
consensus GGTCGCGCTCGGGCTCCTTGAGCGCCTTGATGACTAGCGCGGCGGCGGAGGGGACCACCG
. : . : . : . : . : . :
JMFN005B15+ ACACCTTCGCCTGACGATTCTGAACCGTAAGCTTGACGGTGACGCGGAGGCCCTTCCAGT
rJMFF007F14- ACACCTTCGCCTGACGATTCTGAACCGTAAGCTTGACGGTGACGCGGAGGCCCTTCCAGT
JMFN043O07+ ACACCTTCGCCTGACGATTCTGAACCGTAAGCTTGACGGTGACGCGGAGGCCCTTCCAGT
rJMSF038N15- CCACCTTGGCCTGACGGTTCTGAACGGTGAGCTTGACGGTGACGCGGAGGCCCTTCCAAT
JMFF007F14+ ACACCTTCGCCTGACGATTCTGAACCGTAAGCTTGACGGTGACGCGGAGGCCCTTCCAGT
JMFN042J04+ ACACCTTCGCCTGACGATTCTGAACCGTAAGCTTGACGGTGACGCGGAGGCCCTTCCAGT
____________________________________________________________
consensus ACACCTTCGCCTGACGATTCTGAACCGTAAGCTTGACGGTGACGCGGAGGCCCTTCCAGT
. : . : . : . : . : . :
JMFN005B15+ CCTTGGCGGTCTCCTTGGCGATGTCCTCACCGATCTTCTTGGGGGAGAGACCGAGTGGAC
rJMFF007F14- CCTTGGCGGTCTCCTTGGCGATGTCCTCACCGATCTTCTTGGGGGAGAGACCGAGTGGAC
JMFN043O07+ CCTTGGCGGTCTCCTTGGCGATGTCCTCACCGATCTTCTTGGGGGAGAGACCGAGTGGAC
rJMSF038N15- CCTTGGCGGTTTCCTTGGCAATGTCCTCACCAATCTTCTTGGGGGAGAGACCGAGCGGAC
JMFF007F14+ CCTTGGCGGTCTCCTTGGCGATGTCCTCACCGATCTTCTTGGGGGAGAGACCGAGTGGAC
JMFN042J04+ CCTTGGCGGTCTCCTTGGCGATGTCCTCACCGATCTTCTTGGGGGAGAGACCGAGTGGAC
____________________________________________________________
consensus CCTTGGCGGTCTCCTTGGCGATGTCCTCACCGATCTTCTTGGGGGAGAGACCGAGTGGAC
. : . : . : . : . : . :
JMFN005B15+ CGATCTTGGGGGCGAGAGAACTAGCCGCTCCGACTTCGCCGCCGGTGACGCGGACGAAGA
rJMFF007F14- CGATCTTGGGGGCGAGAGAACTAGCCGCTCCGACTTCGCCGCCGGTGACGCGGACGA
JMFN043O07+ CGATCTTGGGGGCGAGAGAACTAGCCGCTCCGACTTCGCCGCCGGTGACGCGGACGAAGA
rJMSF038N15- CGATCTTCGGAGCGAGAGAACTCGCGGCTCCGACCTCGCCGCCGGTGACTCTCACGAACA
JMFF007F14+ CGATCTTGGGGGCGAGAGAACTAGCCGCTCCGACTTCGCCGCCGGTGACGCGGACGAAGA
JMFN042J04+ CGATCTTGGGGGCGAGAGAACTAGCCGCTCCGACTTCGCCGCCGGTGACGCGGACGAAGA
____________________________________________________________
consensus CGATCTTGGGGGCGAGAGAACTAGCCGCTCCGACTTCGCCGCCGGTGACGCGGACGAAGA
. : . : . : . : . : . :
JMFN005B15+ CCTCGACGACCTGTGTAGGATCGAACTTCGGCGGCATT
JMFN043O07+ CCTCGACGACCTGTGTAGGATCGAACTTCGGCGGCATT
rJMSF038N15- CCTCAACGACCTGAGTGGGATCGAACTTCGGCGGCATTTTTGCG
JMFF007F14+ CCTCGACGACCTGTGTAGGATCGAACTTCGGCGGCATT
JMFN042J04+ CCTCGACGACCTGTGTAGGATCGAACTTCGGCGGCATTTTCGCACGGAGAAGAGGGCAGA
____________________________________________________________
consensus CCTCGACGACCTGTGTAGGATCGAACTTCGGCGGCATTTTTGCGCGGAGAAGAGGGCAGA