Contig 006166:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF024B11-                                                       AATCCCGTCAATATT
                      ____________________________________________________________
consensus                                                          AATCCCGTCAATATT
 
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rJMFF024B11-          CGGCAATGCCATTGCCAGACAAATTTTTTGTACAACTAGTCCCATATTATTTCGTTATAC
                      ____________________________________________________________
consensus             CGGCAATGCCATTGCCAGACAAATTTTTTGTACAACTAGTCCCATATTATTTCGTTATAC
 
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rJMFF024B11-          CTTGCAAGACAAGAAGAGTAAAATGCAATTTGGAAGTTTAGCTAGCACCAAGTTCACTAC
                      ____________________________________________________________
consensus             CTTGCAAGACAAGAAGAGTAAAATGCAATTTGGAAGTTTAGCTAGCACCAAGTTCACTAC
 
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rJMFF024B11-          GTGGTAAAGATAGTAAAAAACCGAACATTTACAAAGCTTTAACAAACGTAAAACCATAAA
                      ____________________________________________________________
consensus             GTGGTAAAGATAGTAAAAAACCGAACATTTACAAAGCTTTAACAAACGTAAAACCATAAA
 
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rJMFF024B11-          GTTAACCATTGGTGGATCGGATTGGGCCAGTGAAACTTCGTGACTACGAACACTGTGAAC
                      ____________________________________________________________
consensus             GTTAACCATTGGTGGATCGGATTGGGCCAGTGAAACTTCGTGACTACGAACACTGTGAAC
 
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rJMFF024B11-          TGCTTAAGACCCTCTCTATGGCCGCCACATAGAACTCCTTAGGCATGGTACCGATGACAG
                      ____________________________________________________________
consensus             TGCTTAAGACCCTCTCTATGGCCGCCACATAGAACTCCTTAGGCATGGTACCGATGACAG
 
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rJMFF024B11-          AACCACATTTCTCTCCATTGTTAAACAACAAGACTACCGGCACTGCCTTGATATCGTAAT
                      ____________________________________________________________
consensus             AACCACATTTCTCTCCATTGTTAAACAACAAGACTACCGGCACTGCCTTGATATCGTAAT
 
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rJMFF024B11-          CCTCAGCAATTTGCAAGTCGGTATCTGCGTGGAGTACAAAGCATTTTATTCTTCCTGAAT
JMFF024B11+                                          GAGTACAAAGCATTTTATTCTTCCTGAAT
JMFN041L21+                                          GAGTACAAAGCATTTTATTCTTCCTGAAT
                      ____________________________________________________________
consensus             CCTCAGCAATTTGCAAGTCGGTATCTGCGTGGAGTACAAAGCATTTTATTCTTCCTGAAT
 
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rJMFF024B11-          AATCAGTTGCGATTTCATCAATCACCCTGTGGACCATCTGGCAGGGGCCACACCAACTGG
JMFF024B11+           AATCAGTTGCGATTTCATCAATCACCCTGTGGACCATCTGGCAGGGGCCACACCAACTGG
JMFN041L21+           AATCAGTTGCGATTTCATCAATCACCCTGTGGACCATCTGGCAGGGGCCACACCAACTGG
                      ____________________________________________________________
consensus             AATCAGTTGCGATTTCATCAATCACCCTGTGGACCATCTGGCAGGGGCCACACCAACTGG
 
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rJMFF024B11-          CATAAAACTCGACCAGTACAGGCACATCACTGCTCAGAACCAATTTGTTCCACGACTTAC
JMFF024B11+           CATAAAACTCGACCAGTACAGGCACATCACTGCTCAGAACCAATTTGTTCCACGACTTAC
JMFN041L21+           CATAAAACTCGACCAGTACAGGCACATCACTGCTCAGAACCAATTTGTTCCACGACTTAC
                      ____________________________________________________________
consensus             CATAAAACTCGACCAGTACAGGCACATCACTGCTCAGAACCAATTTGTTCCACGACTTAC
 
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rJMFF024B11-          CGGTGACAACTGCAGCTTTGG                                       
JMFF024B11+           CGGTGACAACTGCAGCTTTGGAGCCACGGAGACAAGATATGCGCAAATGGGAAGCAGATG
JMFN041L21+           CGGTGACAACTGCAGCTTTGGAGCCACGGAGACAAGATATGCGCAAATGGGAAGCAGATG
                      ____________________________________________________________
consensus             CGGTGACAACTGCAGCTTTGGAGCCACGGAGACAAGATATGCGCAAATGGGAAGCAGATG
 
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JMFF024B11+           GAGATTTCAAGCTCCTCTTGAGCTGTAATGGCAAAAGGAATCTGAGATTCACCTTCTGCG
JMFN041L21+           GAGATTTCAAGCTCCTCTTGAGCTGTAATGGCAAAAGGAATCTGAGATTCACCTTCTGCG
                      ____________________________________________________________
consensus             GAGATTTCAAGCTCCTCTTGAGCTGTAATGGCAAAAGGAATCTGAGATTCACCTTCTGCG
 
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JMFF024B11+           GGAAGTTGGACGGCAACGAACAGAGAGAGCGGTGGCGGAGAGGCGCCTGCGGGAGTGGTA
JMFN041L21+           GGAAGTTGGACGGCAACGAACAGAGAGAGCGGTGGCGGAGAGGCGCCTGCGGGAGTGGTA
                      ____________________________________________________________
consensus             GGAAGTTGGACGGCAACGAACAGAGAGAGCGGTGGCGGAGAGGCGCCTGCGGGAGTGGTA
 
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JMFF024B11+           AAGAGGAAGGAGTGGCATAACTCGAAGCCATTTTCAGTACGATCATCAGATTTCCAGAAA
JMFN041L21+           AAGAGGAAGGAGTGGCATAACTCGAAGCCATTTTCAGTACGATCATCAGATTTCCAGAAA
                      ____________________________________________________________
consensus             AAGAGGAAGGAGTGGCATAACTCGAAGCCATTTTCAGTACGATCATCAGATTTCCAGAAA
 
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JMFF024B11+           TAGATCAATTCCCAGCAGTATTGAGTAGTGTTCTAGGGCGAACTCCGAAAG         
JMFN041L21+           TAGATCAATTCCCAGCAGTATTGAGTAGTGTTCTAGGGCGAACTCCGAAAGGAAGATCCA
                      ____________________________________________________________
consensus             TAGATCAATTCCCAGCAGTATTGAGTAGTGTTCTAGGGCGAACTCCGAAAGGAAGATCCA