| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF035M23 | Sequence | 554 | 006164 (7) | emb|CDP12102.1| | 4e-109 | unnamed protein product [Coffea canephora] | |||||
| JMFF036H01 | Sequence | 379 | 013431 (6) | 737 | 006164 (7) | emb|CDP12102.1| | 9e-32 | unnamed protein product [Coffea canephora] | |||
| JMFN029P19 | Sequence | 607 | 006164 (7) | emb|CDP12102.1| | 7e-71 | unnamed protein product [Coffea canephora] | |||||
| JMFN040H03 | Sequence | 506 | 006164 (7) | ref|XP_008336898.1| | 48.5 | PREDICTED: uncharacterized protein LOC103456102 [Malus domestica] ref|XP_0083375 | |||||
| JMSF032B01 | Sequence | 388 | 013431 (6) | 702 | 006164 (7) | emb|CDP12102.1| | 6e-31 | unnamed protein product [Coffea canephora] | |||
| JMSF036H19 | Sequence | 219 | 013431 (6) | 717 | 006164 (7) | emb|CDP12102.1| | 3e-35 | unnamed protein product [Coffea canephora] | |||
| JMSF051F17 | Sequence | 386 | 013431 (6) | 808 | 006164 (7) | emb|CDP12102.1| | 2e-44 | unnamed protein product [Coffea canephora] | |||
This contig is upended
. : . : . : . : . : . :
JMFF035M23- GGTTGTGCATTCGCCACGGTGGAGGCAAGAGATGCCAGAAA
____________________________________________________________
consensus GGTTGTGCATTCGCCACGGTGGAGGCAAGAGATGCCAGAAA
. : . : . : . : . : . :
JMFF035M23- GAGAACTGCACAAAGAGTGCCGAAGGCCTTTCTGGTCTCTGCATTTCACATGGAGGCGGT
____________________________________________________________
consensus GAGAACTGCACAAAGAGTGCCGAAGGCCTTTCTGGTCTCTGCATTTCACATGGAGGCGGT
. : . : . : . : . : . :
JMFF035M23- CGGCGATGCCAGTATCCACAATGCACCAAGGGGGCACAAGGGAGCACAATGTTCTGTAAA
____________________________________________________________
consensus CGGCGATGCCAGTATCCACAATGCACCAAGGGGGCACAAGGGAGCACAATGTTCTGTAAA
. : . : . : . : . : . :
JMFF035M23- GCACATGGTGGCGGTAAGCGTTGCATTTATGAAGGGTGTACAAAGGGTGCAGAAGGGAGC
____________________________________________________________
consensus GCACATGGTGGCGGTAAGCGTTGCATTTATGAAGGGTGTACAAAGGGTGCAGAAGGGAGC
. : . : . : . : . : . :
JMFF035M23- ACACCATTTTGCAAGGGCCATGGTGGAGGGAAAAGATGTTTATTCCAAGGAGGTGGGGTT
____________________________________________________________
consensus ACACCATTTTGCAAGGGCCATGGTGGAGGGAAAAGATGTTTATTCCAAGGAGGTGGGGTT
. : . : . : . : . : . :
JMFF035M23- TGCCCAAAAAGTGTGCACGGAGGGACTCTTTACTGTGTAGCACATGGGGGCGGTAAGAGA
____________________________________________________________
consensus TGCCCAAAAAGTGTGCACGGAGGGACTCTTTACTGTGTAGCACATGGGGGCGGTAAGAGA
. : . : . : . : . : . :
JMFF035M23- TGTGCTGTGACCGATTGCACAAAGAGTGCAAGGGGCCGGACTGATTTTTGTGTGCGCCAC
JMFN029P19- GATTTCTGTGTGCGTCAT
____________________________________________________________
consensus TGTGCTGTGACCGATTGCACAAAGAGTGCAAGGGGCCGGACTGATTTTTGTGTGCGTCAT
. : . : . : . : . : . :
JMFF035M23- GGTGGGGGCAAGAGATGCAAGTTTGAAGGGTGTGGAAAAAGTGCCCAAGGAAGCACTGAA
JMFN029P19- GGTGGGGGCAAGAGATGCCAGTTTGAAGGTTGTGGAAAAAGTGCTCAGGGAAGCACTGAT
rJMSF051F17+ GGAAGCACTGAT
____________________________________________________________
consensus GGTGGGGGCAAGAGATGCCAGTTTGAAGGTTGTGGAAAAAGTGCTCAGGGAAGCACTGAT
. : . : . : . : . : . :
JMFF035M23- TTCTGCAAGGCACATGGTGGAGGGAAGAGATGCTCTTGGGGTCAGGCTGGTTCTGAATTT
JMFN029P19- TTTTGCAAGGCACATGGTGGAGGGAAAAGATGCTATTGGGGCCAGCCTAGTTCTGAATTT
rJMSF051F17+ TTTTGCAAGGCACATGGNGGA-GGAAAAGATGCTATTGGGGCCAGCCTAGTTCTGAATTT
____________________________________________________________
consensus TTTTGCAAGGCACATGGTGGAGGGAAAAGATGCTATTGGGGCCAGCCTAGTTCTGAATTT
. : . : . : . : . : . :
JMFF035M23- GGCA
JMFN029P19- GGCAAAGGTGAAATTCCTTGTAATTCATTTGCCAGGGGAAAGACAGGGCTTTGTGCATCT
rJMSF051F17+ GGCAAAGGTGAAATTCCTTGTAATTCATTTGCCAGGGGAAAGACAGGGCTTTGTGCATCT
rJMSF032B01+ CCAGGGGAAAGACAGGGCTTTGTGCATCT
rJMSF036H19+ GGGCTTTGTGCATCT
rJMFF036H01+ CATTTGCCAGGGGAAAGACAGGGCTTTGTGCATCT
____________________________________________________________
consensus GGCAAAGGTGAAATTCCTTGTAATTCATTTGCCAGGGGAAAGACAGGGCTTTGTGCATCT
. : . : . : . : . : . :
JMFN029P19- CATGGTGCTCTGGTTCAGGATAAACGGGTTCATGGTGGAGCTACCCTCGGAGTTGTAGTC
rJMSF051F17+ CATGGTGCTCTGGTTCAGGATAAACGGGTTCATGGTGGAGCTACCCTCGGAGTTGTAGTC
rJMSF032B01+ CATGGTGCTCTGGTTCAGGATAAACGGGTTCATGGTGGAGCTACCCTCGGAGTTGTAGTC
rJMSF036H19+ CATGGTGCTCTGGTTCAGGATAAACGGGTTCATGGTGGAGCTACCCTCGGAGTTGTAGTC
rJMFF036H01+ CATGGTGCTCTGGTTCAGGATAAACGGGTTCATGGTGGAGCTACCCTCGGAGTTGTAGTC
____________________________________________________________
consensus CATGGTGCTCTGGTTCAGGATAAACGGGTTCATGGTGGAGCTACCCTCGGAGTTGTAGTC
. : . : . : . : . : . :
JMFN029P19- CAGGAGATAACACCAAAGAGAACTGAGAATATGAAAGAGATTGACACTACAGAGGACATG
rJMSF051F17+ CAGGAGATAACACCAAAGAGAACTGAGAATATGAAAGAGATTGACACTACAGAGGACATG
rJMSF032B01+ CAGGAGATAACACCAAAGAGAACTGAGAATATGAAAGAGATTGACACTACAGAGGACATG
rJMSF036H19+ CAGGAGATAACACCAAAGAGAACTGAGAATATGAAAGAGATTGACACTACAGAGGACATG
rJMFF036H01+ CAGGAGATAACACCAAAGAGAACTGAGAATATGAAAGAGATTGACACTACAGAGGACATG
____________________________________________________________
consensus CAGGAGATAACACCAAAGAGAACTGAGAATATGAAAGAGATTGACACTACAGAGGACATG
. : . : . : . : . : . :
JMFN029P19- GATGCTGATAGCATGACTGTGGAAAGAAGTGTTGTAACATCTGCAAATGGTTCTGATTGG
rJMSF051F17+ GATGCTGATAGCATGACTGTGGAAAGAAGTGTTGTAACATCTGCAAATGGTTCTGATTGG
rJMSF032B01+ GATGCTGATAGCATGACTGTGGAAAGAAGTGTTGTAACATCTGCAAATGGTTCTGATTGG
rJMSF036H19+ GATGCTGATAGCATGACTGTGGAAAGAAGTGTTGTAACATCTGCAAATGGTTCTGATTGG
rJMFF036H01+ GATGCTGATAGCATGACTGTGGAAAGAAGTGTTGTAACATCTGCAAATGGTTCTGATTGG
____________________________________________________________
consensus GATGCTGATAGCATGACTGTGGAAAGAAGTGTTGTAACATCTGCAAATGGTTCTGATTGG
. : . : . : . : . : . :
JMFN029P19- AAATATATCAGTTTTAAACAAGCTACCATGCCAATTCTAGGCAGTCCTCCATCTATTCCA
rJMSF051F17+ AAATATATCAGTTTTAAACAAGCTACCATGCCAATTCTAGGCAGTCCTCCATCTATTCCA
rJMSF032B01+ AAATATATCAGTTTTAAACAAGCTACCATGCCAATTCTAGGCAGTCCTCCATCTATTCCA
rJMSF036H19+ AAATATATCAGTTTTAAACAAGCTACCATGCCAATTCTAGGCAGTCCTCCATCTATTCCA
rJMFF036H01+ AAATATATCAGTTTTAAACAAGCTACCATGCCAATTCTAGGCAGTCCTCCATCTATTCCA
JMFN040H03- CAATTCTAGGCAGTCCTCCATCTATTCCA
____________________________________________________________
consensus AAATATATCAGTTTTAAACAAGCTACCATGCCAATTCTAGGCAGTCCTCCATCTATTCCA
. : . : . : . : . : . :
JMFN029P19- GTTACAATTCCTGAAGGAAGGGTTCATGGAGGAAGCTTATTGTCAATGCTAGCAAGTAAT
rJMSF051F17+ GTTACAATTCCTGAAGGAAGGGTTCATGGAGGAAGCTTATTGTCAATGCTAGCAAGTAAT
rJMSF032B01+ GTTACAATTCCTGAAGGAAGGGTTCATGGAGGAAGCTTATTGTCAATGCTAGCAAGTAAT
rJMSF036H19+ GTTACAATTCCTGAAGGAAGGGTTCATGGAGGAAGCTTATTGTCAATGCTAGCAAGTAAT
rJMFF036H01+ GTTACAATTCCTGAAGGAAGGGTTCATGGAGGAAGCTTATTGTCAATGCTAGCAAGTAAT
JMFN040H03- GTTACAATTCCTGAAGGAAGGGTTCATGGAGGAAGCTTATTGTCAATGCTAGCAAGTAAT
____________________________________________________________
consensus GTTACAATTCCTGAAGGAAGGGTTCATGGAGGAAGCTTATTGTCAATGCTAGCAAGTAAT
. : . : . : . : . : . :
JMFN029P19- TCTGACCCTTCCTTAAGCAGTAGCAGGGGCACGGAGAATCCATCTGAGCCCAGGAAAGCT
rJMSF051F17+ TCTGACCCTTCCTTAAGCAGTAGCAGGGGCACGGAGAATCCATCTGAGCCCAGGAAAGCT
rJMSF032B01+ TCTGACCCTTCCTTAAGCAGTAGCAGGGGCACGGAGAATCCATCTGAGCCCAGGAAAGCT
rJMSF036H19+ TCTGACCCTTCCTTAAGCAGTAGCAGGGGCACGGAGAATCCATCTGAGCCCAGGAAAGCT
rJMFF036H01+ TCTGACCCTTCCTTAAGCAGTAGCAGGGGCACGGAGAATCCATCTGAGCCCAGGAAAGCT
JMFN040H03- TCTGACCCTTCCTTAAGCAGTAGCAGGGGCACGGAGAATCCATCTGAGCCCAGGAAAGCT
____________________________________________________________
consensus TCTGACCCTTCCTTAAGCAGTAGCAGGGGCACGGAGAATCCATCTGAGCCCAGGAAAGCT
. : . : . : . : . : . :
JMFN029P19- TATATTACACACCAAAGCTGGATGTAAGAAAGAAGACCTATCCCGCTAC
rJMSF051F17+ TATATTACACACCAAAGCTGGATGTAAGAAAGAAGACCTATCCCGCTACACTTGAGGCCA
rJMSF032B01+ TATATTACACACCAAAGCTGGATGTAAGAAAGAAGACCTATCCCGCTACACTTGAGGCCA
rJMSF036H19+ TATATTACACACCAAAGCTGGATGTAAGAAAGAAGACCTATCCCGCTACACTTGAGGCCA
rJMFF036H01+ TATATTACACACCAAAGCTGGATGTAAGAAAGAAGACCTATCCCGCTACACTTGAGGCCA
JMFN040H03- TATATTACACACCAAAGCTGGATGTAAGAAAGAAGACCTATCCCGCTACACTTGAGGCCA
____________________________________________________________
consensus TATATTACACACCAAAGCTGGATGTAAGAAAGAAGACCTATCCCGCTACACTTGAGGCCA
. : . : . : . : . : . :
rJMSF051F17+ GTGTGTGTATTTCCTCAATTTCCAGTTATGCAGTCTACTGAATTAATGTGTACTTGCTTT
rJMSF032B01+ GTGTGTGTATTTCCTCAATTTCCAGTTATGCAGTCTACTGAATTAATGTGTACTTGCTTT
rJMSF036H19+ GTGTGTGTATTTCCTCAATTTCCAGTTATGCAGTCTACTGAATTAATGTGTACTTGCTTT
rJMFF036H01+ GTGTGTGTATTTCCTCAATTTCCAGTTATGCAGTCTACTGAATTAATGTGTACTTGCTTT
JMFN040H03- GTGTGTGTATTTCCTCAATTTCCAGTTATGCAGTCTACTGAATTAATGTGTACTTGCTTT
____________________________________________________________
consensus GTGTGTGTATTTCCTCAATTTCCAGTTATGCAGTCTACTGAATTAATGTGTACTTGCTTT
. : . : . : . : . : . :
rJMSF051F17+ TCTAGTTTGTTTGGTGAGGAAATGCGCTCACTTGTCAAGTGAGTGATAGAGGACTTGGCA
rJMSF032B01+ TCTAGTTTGTTTGGTGAGGAAATGCGCTCACTTGTCAAGTGAGTGATAGAGGACTTGGCA
rJMSF036H19+ TCTAGTTTGTTTGGTGAGGAAATGCGCTCACTTGTCAAGTGAGTGATAGAGGACTTGGCA
rJMFF036H01+ TCTAGTTTGTTTGGTGAGGAAATGCGCTCACTTGTCAAGTGAGTGATAGAGGACTTGGCA
JMFN040H03- TCTAGTTTGTTTGGTGAGGAAATGCGCTCACTTGTCAAGTGAGTGATAGAGGACTTGGCA
____________________________________________________________
consensus TCTAGTTTGTTTGGTGAGGAAATGCGCTCACTTGTCAAGTGAGTGATAGAGGACTTGGCA
. : . : . : . : . : . :
rJMSF051F17+ TTTGATTACTATTTTGTATGTGTGGCAATAAGTATT-AACTAGGAATAGTTAGTCATA-T
rJMSF032B01+ TTTGATTACTATTTTGTATGTGTGGCAATAAGTATT-AACTAGGAATAGTTAGTCATA-T
rJMSF036H19+ TTTGATTACTATTTTGTATGTGTGGCAATAAGTATTAAACTAGGAATAGTTAGTCATACT
rJMFF036H01+ TTTGATTACTATTTTGTATGTGTGGCAATAAGTATT-AACTAGGAATAGTTAGTCATA-T
JMFN040H03- TTTGATTACTATTTTGTATGTGTGTCAATAAGTATT-AACTAGGAATAGTTAGTCATA-T
____________________________________________________________
consensus TTTGATTACTATTTTGTATGTGTGGCAATAAGTATT-AACTAGGAATAGTTAGTCATA-T
. : . : . : . : . : . :
rJMSF051F17+ GAATGTGGGTCATTGATATTTTCCTGTGTA-CATAGGAA
rJMSF032B01+ GAATGTGGGTCATTGATATTTTCCTGTGTA-CATAGGAAGCTTGTCCTTTGTTAG
rJMSF036H19+ GAATGTGGGTCATTGATATTTTCCTGTGTACCATAGGAAGCTTGTCCTTTGTTAG
rJMFF036H01+ GAATGTGGGTCATTGATATTTTCCTGTGTA-CATAGGAAGCTTGTCCTTTGTTAGCTTAT
JMFN040H03- GAATGTGGGTCATTGATATTTTCCTGTGTA-CATAGGAAGCTTGTCCTTTGTTAGCTTAT
____________________________________________________________
consensus GAATGTGGGTCATTGATATTTTCCTGTGTA-CATAGGAAGCTTGTCCTTTGTTAGCTTAT
. : . : . : . : . : . :
rJMFF036H01+ GATCATGTGAATATTTCATGTACTGTGACAACTAGTTAAATAAAA
JMFN040H03- GATCATGTGAATATTTCATGTACTGTGACAACTAGTTAAATAAAACTATTGCATTGCTGT
____________________________________________________________
consensus GATCATGTGAATATTTCATGTACTGTGACAACTAGTTAAATAAAACTATTGCATTGCTGT