Contig 006159:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN010D05Sequence615006159 (5)
JMFN014B24Sequence597006159 (5)
JMFN030L16Sequence643006159 (5)
JMFN038D20Sequence622006159 (5)
JMFN041G10Sequence639006159 (5)

Alignment

This contig is upended


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JMFN014B24+                     CAATCATGGAATTAAAGTTTATTATTCTTTCATAGAAATTATTGGAACAT
JMFN041G10+                          ATGGAATTAAAGTNTATTATTCTTTCATAGAAATTATTGGAACAT
JMFN010D05+                                                    ATAGAAATTATTGGAACAT
JMFN030L16+                          ATGGAATTAAAGTTTATTATTCTTTCATAGAAATTATTGGAACAT
JMFN038D20+                                                 TTCATAGAAATTATTGGAACAT
                      ____________________________________________________________
consensus                       CAATCATGGAATTAAAGTTTATTATTCTTTCATAGAAATTATTGGAACAT
 
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JMFN014B24+           ATATATATTATAATTAAGAAAATAATGTTATTACAGTAGAGGCGGTGCCGGCGGCCGGCG
JMFN041G10+           ATATATATTATAATTAAGAAAATAATGTTATTACAGTAGAGGCGGTGCCGGCGGCCGGCG
JMFN010D05+           ATATATATTATAATTAAGAAAATAATGTTATTACAGTAGAGGCGGTGCCGGCGGCCGGCG
JMFN030L16+           ATATATATTATAATTAAGAAAATAATGTTATTACAGTAGAGGCGGTGCCGGCGGCCGGCG
JMFN038D20+           ATATATATTATAATTAAGAAAATAATGTTATTACAGTAGAGGCGGTGCCGGCGGCCGGCG
                      ____________________________________________________________
consensus             ATATATATTATAATTAAGAAAATAATGTTATTACAGTAGAGGCGGTGCCGGCGGCCGGCG
 
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JMFN014B24+           GCCATGAAAGGTGGCTAGGATCGAAAGATCACTTCCACTTCTTGAATTTTCCTCCTCCGA
JMFN041G10+           GCCATGAAAGGTGGCTAGGATCGAAAGATCACTTCCACTTCTTGAATTTTCCTCCTCCGA
JMFN010D05+           GCCATGAAAGGTGGCTAGGATCGAAAGATCACTTCCACTTCTTGAATTTTCCTCCTCCGA
JMFN030L16+           GCCATGAAAGGTGGCTAGGATCGAAAGATCACTTCCACTTCTTGAATTTTCCTCCTCCGA
JMFN038D20+           GCCATGAAAGGTGGCTAGGATCGAAAGATCACTTCCACTTCTTGAATTTTCCTCCTCCGA
                      ____________________________________________________________
consensus             GCCATGAAAGGTGGCTAGGATCGAAAGATCACTTCCACTTCTTGAATTTTCCTCCTCCGA
 
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JMFN014B24+           ACATGCCGCCATATTTCCCATGCTTTCCAAACTTTCCATGCTTCCCAAACTTCCCACGCT
JMFN041G10+           ACATGCCGCCATATTTCCCATGCTTTCCAAACTTTCCATGCTTCCCAAACTTCCCACGCT
JMFN010D05+           ACATGCCGCCATATTTCCCATGCTTTCCAAACTTTCCATGCTTCCCAAACTTCCCACGCT
JMFN030L16+           ACATGCCGCCATATTTCCCATGCTTTCCAAACTTTCCATGCTTCCCAAACTTCCCACGCT
JMFN038D20+           ACATGCCGCCATATTTCCCATGCTTTCCAAACTTTCCATGCTTCCCAAACTTCCCACGCT
                      ____________________________________________________________
consensus             ACATGCCGCCATATTTCCCATGCTTTCCAAACTTTCCATGCTTCCCAAACTTCCCACGCT
 
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JMFN014B24+           TGAACTTTCCATGACCGTAATAGTGTCCGCCACCGCCGCCATATCCATAGTGACCGCCGC
JMFN041G10+           TGAACTTTCCATGACCGTAATAGTGTCCGCCACCGCCGCCATATCCATAGTGACCGCCGC
JMFN010D05+           TGAACTTTCCATGACCGTAATAGTGTCCGCCACCGCCGCCATATCCATAGTGACCGCCGC
JMFN030L16+           TGAACTTTCCATGACCGTAATAGTGTCCGCCACCGCCGCCATATCCATAGTGACCGCCGC
JMFN038D20+           TGAACTTTCCATGACCGTAATAGTGTCCGCCACCGCCGCCATATCCATAGTGACCGCCGC
                      ____________________________________________________________
consensus             TGAACTTTCCATGACCGTAATAGTGTCCGCCACCGCCGCCATATCCATAGTGACCGCCGC
 
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JMFN014B24+           CGTGCCCGGAGTGATAACGACCGGCGCCATATCCCGCCGCTGCCGCCACCAAACCTTCCA
JMFN041G10+           CGTGCCCGGAGTGATAACGACCGGCGCCATATCCCGCCGCTGCCGCCACCAAACCTTCCA
JMFN010D05+           CGTGCCCGGAGTGATAACGACCGGCGCCATATCCCGCCGCTGCCGCCACCAAACCTTCCA
JMFN030L16+           CGTGCCCGGAGTGATAACGACCGGCGCCATATCCCGCCGCTGCCGCCACCAAACCTTCCA
JMFN038D20+           CGTGCCCGGAGTGATAACGACCGGCGCCATATCCCGCCGCTGCCGCCACCAAACCTTCCA
                      ____________________________________________________________
consensus             CGTGCCCGGAGTGATAACGACCGGCGCCATATCCCGCCGCTGCCGCCACCAAACCTTCCA
 
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JMFN014B24+           CTACCATCGGCACAGCATGGCTGCTAGATCCATATCTCCCTGATGAGTGGTGTGTAGGAT
JMFN041G10+           CTACCATCGGCACAGCATGGCTGCTAGATCCATATCTCCCTGATGAGTGGTGTGTAGGAT
JMFN010D05+           CTACCATCGGCACAGCATGGCTGCTAGATCCATATCTCCCTGATGAGTGGTGTGTAGGAT
JMFN030L16+           CTACCATCGGCACAGCATGGCTGCTAGATCCATATCTCCCTGATGAGTGGTGTGTAGGAT
JMFN038D20+           CTACCATCGGCACAGCATGGCTGCTAGATCCATATCTCCCTGATGAGTGGTGTGTAGGAT
                      ____________________________________________________________
consensus             CTACCATCGGCACAGCATGGCTGCTAGATCCATATCTCCCTGATGAGTGGTGTGTAGGAT
 
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JMFN014B24+           AACCTGAAGAGTGGTAGGTAGAAGAATAGGGTTGGGGATAAGCTGAAGAGTGTGGGTATC
JMFN041G10+           AACCTGAAGAGTGGTAGGTAGAAGAATAGGGTTGGGGATAAGCTGAAGAGTGTGGGTATC
JMFN010D05+           AACCTGAAGAGTGGTAGGTAGAAGAATAGGGTTGGGGATAAGCTGAAGAGTGTGGGTATC
JMFN030L16+           AACCTGAAGAGTGGTAGGTAGAAGAATAGGGTTGGGGATAAGCTGAAGAGTGTGGGTATC
JMFN038D20+           AACCTGAAGAGTGGTAGGTAGAAGAATAGGGTTGGGGATAAGCTGAAGAGTGTGGGTATC
                      ____________________________________________________________
consensus             AACCTGAAGAGTGGTAGGTAGAAGAATAGGGTTGGGGATAAGCTGAAGAGTGTGGGTATC
 
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JMFN014B24+           CACTAGGAGGATACACCGCCGCTGGCGGTGGATACCCTTGCGGGGGAGGGTAAGCCGCTG
JMFN041G10+           CACTAGGAGGATACACCGCCGCTGGCGGTGGATACCCTTGCGGGGGAGGGTAAGCCGCTG
JMFN010D05+           CACTAGGAGGATACACCGCCGCTGGCGGTGGATACCCTTGCGGGGGAGGGTAAGCCGCTG
JMFN030L16+           CACTAGGAGGATACACCGCCGCTGGCGGTGGATACCCTTGCGGGGGAGGGTAAGCCGCTG
JMFN038D20+           CACTAGGAGGATACACCGCCGCTGGCGGTGGATACCCTTGCGGGGGAGGGTAAGCCGCTG
                      ____________________________________________________________
consensus             CACTAGGAGGATACACCGCCGCTGGCGGTGGATACCCTTGCGGGGGAGGGTAAGCCGCTG
 
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JMFN014B24+           CTGGCGGAGGATAGCAATAACTATTATTGTGTGGGTAGTGCAGCCCTCTATCCTTTCCCG
JMFN041G10+           CTGGCGGAGGATAGCAATAACTATTATTGTGTGGGTAGTGCAGCCCTCTATCCTTTCCCG
JMFN010D05+           CTGGCGGAGGATAGCA--AACTATTATTGTGTGGGTAGTGCAGCCCTCTATCCTTTCCCG
JMFN030L16+           CTGGCGGAGGATAGCAATAACTATTATTGTGTGGGTAGTGCAGCCCTCTATCCTTTCCCG
JMFN038D20+           CTGGCGGAGGATAGCAATAACTATTATTGTGTGGGTAGTGCAGCCCTCTATCCTTTCCCG
                      ____________________________________________________________
consensus             CTGGCGGAGGATAGCAATAACTATTATTGTGTGGGTAGTGCAGCCCTCTATCCTTTCCCG
 
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JMFN014B24+           ACA                                                         
JMFN041G10+           ACATTTTCTCTTATGTTAATACAAATTATGGTTTCAAAGTTGCTTGATATGA        
JMFN010D05+           ACATTTTCTCTTATGTTAATACAAATTATGGTTTCAAAGTTGCTTGATATGA        
JMFN030L16+           ACATTTTCTCTTATGTTAATACAAATTATGGTTTCAAAGTTGCTTGATATGA        
JMFN038D20+           ACATTTTCTCTTATGTTAATACAAATTATGGTTTCAAAGTTGCTTGATATGATATAAACA
                      ____________________________________________________________
consensus             ACATTTTCTCTTATGTTAATACAAATTATGGTTTCAAAGTTGCTTGATATGATATAAACA