Contig 006158:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002B19Sequence578004795 (4)emb|CDP07060.1|5e-92unnamed protein product [Coffea canephora]714006158 (3)ref|XP_006340221.1|2e-94PREDICTED: cell division cycle protein 48 homolog [Solanum tuberosum]
JMFN037C01Sequence393006158 (3)ref|XP_010241832.1|2e-11PREDICTED: cell division cycle protein 48 homolog [Nelumbo nucifera]
JMFS151F09Sequence633006158 (3)ref|XP_006340221.1|2e-73PREDICTED: cell division cycle protein 48 homolog [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF002B19+                                                     GTCCCGGTCGTCTTGAC
                      ____________________________________________________________
consensus                                                        GTCCCGGTCGTCTTGAC
 
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JMFS151F09-           CAATTAATATATATCCCTCTTCCAGATGAAGATTCTCGGCATCAGATCTTCAAAGCTTGC
rJMFF002B19+          CAATTAATATATATCCCTCTTCCAGATGAAGATTCTCGGCATCAGATCTTCAAAGCTTGC
                      ____________________________________________________________
consensus             CAATTAATATATATCCCTCTTCCAGATGAAGATTCTCGGCATCAGATCTTCAAAGCTTGC
 
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JMFS151F09-           CTGAGAAAATCTCCAGTTTCCAAAGATGTTGATATAAGAGCTCTTGCGAAATACACTCAT
rJMFF002B19+          CTGAGAAAATCTCCAGTTTCCAAAGATGTTGATATAAGAGCTCTTGCGAAATACACTCAT
                      ____________________________________________________________
consensus             CTGAGAAAATCTCCAGTTTCCAAAGATGTTGATATAAGAGCTCTTGCGAAATACACTCAT
 
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JMFS151F09-           GGATTTAGTGGAGCAGATATCACAGAGATCTGCCAGAGGGCATGCAAATACGCCATACGG
rJMFF002B19+          GGATTTAGTGGAGCAGATATCACAGAGATCTGCCAGAGGGCATGCAAATACGCCATACGG
                      ____________________________________________________________
consensus             GGATTTAGTGGAGCAGATATCACAGAGATCTGCCAGAGGGCATGCAAATACGCCATACGG
 
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JMFS151F09-           GAGAACAT--AGAAAGATATCGAAAGGGAGAAGCAGAGGAGGGAGAATCCCGATTCCATG
rJMFF002B19+          GAGAACATAGAGAAAGATATCGAAAGGGAGAAGCAGAGGAGGGAGAATCCCGATTCCATG
                      ____________________________________________________________
consensus             GAGAACATAGAGAAAGATATCGAAAGGGAGAAGCAGAGGAGGGAGAATCCCGATTCCATG
 
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JMFS151F09-           GACGAGGATGATGCTGGGGATGAAGTTTCAGAGATTAAACCTGCGCATTTTGAGGAATCC
rJMFF002B19+          GACGAGGATGATGCTGGGGATGAAGTTTCAGAGATTAAACCTGCGCATTTTGAGGAATCC
                      ____________________________________________________________
consensus             GACGAGGATGATGCTGGGGATGAAGTTTCAGAGATTAAACCTGCGCATTTTGAGGAATCC
 
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JMFS151F09-           ATGAAGTATGCTCGTCGGAGTGTGAGTGATGCCGATATACGCAAATACCAATCCTTTGCT
rJMFF002B19+          ATGAAGTATGCTCGTCGGAGTGTGAGTGATGCCGATATACGCAAATACCAATCCTTTGCT
JMFN037C01+                                      GATGCCGATATACGCAAATACCAATCCTTTGCT
                      ____________________________________________________________
consensus             ATGAAGTATGCTCGTCGGAGTGTGAGTGATGCCGATATACGCAAATACCAATCCTTTGCT
 
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JMFS151F09-           CAAACACTGCAACAATCTCGCGGTTTTGGAACTGAATTCCGCTTTGCTGAGTCAGGAACT
rJMFF002B19+          CAAACACTGCAACAATCTCGCGGTTTTGGAACTGAATTCCGCTTTGCTGAGTCAGGAACT
JMFN037C01+           CAAACACTGCAACAATCTCGCGGTTTTGGAACTGAATTCCGCTTTGCTGAGTCAGGAACT
                      ____________________________________________________________
consensus             CAAACACTGCAACAATCTCGCGGTTTTGGAACTGAATTCCGCTTTGCTGAGTCAGGAACT
 
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JMFS151F09-           GGCGGGGCCTCTGGAGCCGACCCATTTGCAACCTCTACTGCAGCAGCTGATGAAGACGAC
rJMFF002B19+          GGCGGGGCCTCTGGAGCCGACCCATTTGCAACCTCTACTGCAGCAGNTGATGAAGACGAC
JMFN037C01+           GGCGGGGCCTCTGGAGCCGACCCATTTGCAACCTTTACTGCAGCAGCTGATGAAGACGAC
                      ____________________________________________________________
consensus             GGCGGGGCCTCTGGAGCCGACCCATTTGCAACCTCTACTGCAGCAGCTGATGAAGACGAC
 
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JMFS151F09-           TTGTATAGCTAAG                                               
rJMFF002B19+          TTGTATAGCTAAGTTTTAGATATATATATATATATGCCCTTTAGTATTAATTATTAGTGT
JMFN037C01+           TTGTATAGCTAAGTTTTAGATATATATATATATATGCCCTTTAGTATTAATTATTAGTGT
                      ____________________________________________________________
consensus             TTGTATAGCTAAGTTTTAGATATATATATATATATGCCCTTTAGTATTAATTATTAGTGT
 
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rJMFF002B19+          TTAGGCTACTTTTTTTTGGGTTCCGTTCAGATATTTTTACTCTTGCACTGCAATTCCCTT
JMFN037C01+           TTAGGCTACTTTTTTTTGGGTTCCGTTCAGATATTTTTACTCTTGCACTGCAATTCCCTT
                      ____________________________________________________________
consensus             TTAGGCTACTTTTTTTTGGGTTCCGTTCAGATATTTTTACTCTTGCACTGCAATTCCCTT
 
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rJMFF002B19+          TTCTTGATATCTGGATTAAATATTTATATATGGTAGACGTCAGATAATCTCATATCTTAC
JMFN037C01+           TTCTTGATATCTGGATTAAATATTTATATATGGTAGACGTCAGATAATCTCATATCTTAC
                      ____________________________________________________________
consensus             TTCTTGATATCTGGATTAAATATTTATATATGGTAGACGTCAGATAATCTCATATCTTAC
 
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rJMFF002B19+          GCACTCCATACTA                                               
JMFN037C01+           GCACTCCATACTACCXXXXXXXXXXXXXXXXXXXXXXXXXXCTGAGACTAGTTCTCTCTC
                      ____________________________________________________________
consensus             GCACTCCATACTACCNNNNNNNNNNNNNNNNNNNNNNNNNNCTGAGACTAGTTCTCTCTC