Contig 006151:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN015C16Sequence621006151 (3)ref|XP_010667361.1|39.7PREDICTED: uncharacterized protein LOC104884418 [Beta vulgaris subsp. vulgaris]
JMFN032B19Sequence616006151 (3)ref|XP_010667361.1|39.7PREDICTED: uncharacterized protein LOC104884418 [Beta vulgaris subsp. vulgaris]
JMFN032D23Sequence610006151 (3)

Alignment

This contig is upended


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JMFN015C16+                                            CTACTAACATANNAACTAATATAAGTA
JMFN032B19+                                                         AACTAATATAAGTA
JMFN032D23+                                                             AATATAAGTA
                      ____________________________________________________________
consensus                                              CTACTAACATANNAACTAATATAAGTA
 
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JMFN015C16+           CCACAATTCAACAAANCTACTAAACATTAAGCCAATAAACATAAACTAATTTTAAACGTA
JMFN032B19+           CCACAATTCAACAAAACTACTAAACATTAAGCCAATAAACATAAACTAATTTTAAACGTA
JMFN032D23+           CCACAATTCAACAAAACTACTAAACATTAAGCCAATAAACATAAACTAATTTTAAACGTA
                      ____________________________________________________________
consensus             CCACAATTCAACAAAACTACTAAACATTAAGCCAATAAACATAAACTAATTTTAAACGTA
 
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JMFN015C16+           AAGTATCAATTAAGAAGCGTTTTATTAACCCATTCATCAATAAGAAACTTAGACCATTTG
JMFN032B19+           AAGTATCAACTAAGAAGCGTTTTATTAACCCATTCATCAATAAGAAACTTAGACCATTTG
JMFN032D23+           AAGTATCAATTAAGAAGCGTTTTATTAACCCATTCATCAATAAGAAACTTAGACCATTTG
                      ____________________________________________________________
consensus             AAGTATCAATTAAGAAGCGTTTTATTAACCCATTCATCAATAAGAAACTTAGACCATTTG
 
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JMFN015C16+           TCTGTAACTTCATCAATCTCTTTTTTGTTGTAGGGCAATCTTCCTTGTCTTTACAAAGCT
JMFN032B19+           TCTGTAACTTCATCAATCTCTTTTTTGTTGTAGGGCAATCTTCCTTGTCTTTACAAAGCT
JMFN032D23+           TCTGTAACTTCATCAATCTCTTTTTTGTTGTAGGGCAATCTTCCTTGTCTTTACAAAGCT
                      ____________________________________________________________
consensus             TCTGTAACTTCATCAATCTCTTTTTTGTTGTAGGGCAATCTTCCTTGTCTTTACAAAGCT
 
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JMFN015C16+           TGTCTTATCAATTCCTTTGCTTAGGTTGTTGGAAACAATTTCCAACATGAACTTCATCAC
JMFN032B19+           TGTCTTATCAATTCCTTTGCTTAGGTTGTTGGAAACAATTTCCAACATGAACTTCATCAC
JMFN032D23+           TGTCTTATCAATTCCTTTGCTTAGGTTGTTGGAAACAATTTCCAACATGAACTTCATCAC
                      ____________________________________________________________
consensus             TGTCTTATCAATTCCTTTGCTTAGGTTGTTGGAAACAATTTCCAACATGAACTTCATCAC
 
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JMFN015C16+           ATAATAACCACATTCGGTGGTTCCCTTTTGTATAGCACACGAACCATTTTGGTGGACGAT
JMFN032B19+           ATAATAACCACATTCGGTGGTTCCCTTTTGTATAGCACACGAACCATTTTGGTGGACGAT
JMFN032D23+           ATAATAACCACATTCGGTGGTTCCCTTTTATATAGCACACGAACCATTTTGGTGGACGAT
                      ____________________________________________________________
consensus             ATAATAACCACATTCGGTGGTTCCCTTTTGTATAGCACACGAACCATTTTGGTGGACGAT
 
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JMFN015C16+           TTTGTTTCTTTCTACTCATCATGTTTGTTGCAGTCATACACCAGCGTAGAGAGTCGAAGG
JMFN032B19+           TTTGTTTCTTTCTACTCATCATGTTTGTTGCAGTCATACACCAGCGTAGAGAGTCGAAGG
JMFN032D23+           TTTGTTTCTTTCTACTCATCATGTTTGTTGCAGTCATACACCAGCGTAGAGAGTCGAAGG
                      ____________________________________________________________
consensus             TTTGTTTCTTTCTACTCATCATGTTTGTTGCAGTCATACACCAGCGTAGAGAGTCGAAGG
 
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JMFN015C16+           AGAGAGCGACCGGCGTCACGGCGTCCCCGGCGTCCGATCTGAGCAGCAGCGGAGAGAATG
JMFN032B19+           AGAGAGCGACCGGCGTCACGGCGTCCCCGGCGTCCGATCTGAGCAGCAGCGGAGAGAATG
JMFN032D23+           AGAGAGCGACCGGCGTCACGGCGTCCCCGGCGTCCGATCTGAGCAGCAGCGGAGAGAATG
                      ____________________________________________________________
consensus             AGAGAGCGACCGGCGTCACGGCGTCCCCGGCGTCCGATCTGAGCAGCAGCGGAGAGAATG
 
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JMFN015C16+           GCGTCCGATCTGAGCAGCGGTGGAGAGAATGGCGTCCGATCTGAGCAGCGGCGGAGAGGA
JMFN032B19+           GCGTCCGATCTGAGCAGCGGTGGAGAGAATGGCGTCCGATCTGAGCAGCGGCGGAGAGGA
JMFN032D23+           GCGTCCGATCTGAGCAGCGGTGGAGAGAATGGCGTCCGATCTGAGCAGCGGCGGAGAGGA
                      ____________________________________________________________
consensus             GCGTCCGATCTGAGCAGCGGTGGAGAGAATGGCGTCCGATCTGAGCAGCGGCGGAGAGGA
 
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JMFN015C16+           GGGCGTTGGATCTGAGCAGCGGCGGAGAGGAGGTGTAGCGGCGTGGCGGTGCAGCGGTGA
JMFN032B19+           GGGCGTTGGATCTGAGCAGCGGCGGAGAGGAGGTGTAGCGGCGTGGCGGTGCAGCGGTGA
JMFN032D23+           GGGCGTTGGATCTGAGCAGCGGCGGAGAGGAGGTGTAGCGGCGTGGCGGTGCAGCGGTGA
                      ____________________________________________________________
consensus             GGGCGTTGGATCTGAGCAGCGGCGGAGAGGAGGTGTAGCGGCGTGGCGGTGCAGCGGTGA
 
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JMFN015C16+           GGCGAACGGTGGT                                               
JMFN032B19+           GGCGAACGGTGGT                                               
JMFN032D23+           GGCGAACGGTGGTGAAGATGAAGATGAAGATGAAGATGAAGGGGAGGGAAGTGTGATGCG
                      ____________________________________________________________
consensus             GGCGAACGGTGGTGAAGATGAAGATGAAGATGAAGATGAAGGGGAGGGAAGTGTGATGCG