Contig 006150:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN003M22+                                          AGGCTGTACTCTCCACCACGTCCCATCTG
                      ____________________________________________________________
consensus                                            AGGCTGTACTCTCCACCACGTCCCATCTG
 
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JMFN003M22+           CATAACACGAAACTCGCAGTTCCCTAGATTATTTAGACGCTCAAATTGCTCCACTGTCCA
                      ____________________________________________________________
consensus             CATAACACGAAACTCGCAGTTCCCTAGATTATTTAGACGCTCAAATTGCTCCACTGTCCA
 
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JMFN003M22+           CTTGAACCACTTCATGAGAAACACACGTATAGCTAGTCCATGGGATACAATTACAAGATT
JMFS052F07+                                                  ATGGGATACAATTACAAGATT
JMFN031O17+                                                  ATGGGATACAATTACAAGATT
                      ____________________________________________________________
consensus             CTTGAACCACTTCATGAGAAACACACGTATAGCTAGTCCATGGGATACAATTACAAGATT
 
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JMFN003M22+           CAGTTCTTCCGATGGTTGACAGTGGAATCTGTGCATATCTACGTCCCTCCATAGAGATTC
JMFS052F07+           CAGTTCTTCCGATGGTTGACAGTGGAATCTGTGCATATCTACGTCCCTCCATAGAGATTC
JMFN031O17+           CAGTTCTTCCGATGGTGACCAGTGGAATCTGTGCATATCTACGTCCCTCCATAGAGATTC
                      ____________________________________________________________
consensus             CAGTTCTTCCGATGGTTGACAGTGGAATCTGTGCATATCTACGTCCCTCCATAGAGATTC
 
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JMFN003M22+           AAGGAAACTTGAAACGCGATCGAAAACATCGGCGGCCGATTCACCTTCGGGGAAGCGGTA
JMFS052F07+           AAGGAAACTTGAAACGCGATCGAAAACATCGGCGGCCGATTCACCTTCGGGGAAGCGGTA
JMFN031O17+           AAGGAAACTTGAAACGCGATCGAAAACATCGGCGGCCGATTCACCTTCGGGGAAGCGGTA
                      ____________________________________________________________
consensus             AAGGAAACTTGAAACGCGATCGAAAACATCGGCGGCCGATTCACCTTCGGGGAAGCGGTA
 
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JMFN003M22+           GAAGAAACGTCCAAACCGCTCCCGAGTCTCCTTAATGATCTTCATCCGCTCGGCCACCTG
JMFS052F07+           GAAGAAACGTCCAAACCGCTCCCGAGTCTCCTTAATGATCTTCATCCGCTCGGCCACCTG
JMFN031O17+           GAAGAAACGTCCAAACCGCTCCCGAGTCTCCTTAATGATCTTCATCCGCTCGGCCACCTG
                      ____________________________________________________________
consensus             GAAGAAACGTCCAAACCGCTCCCGAGTCTCCTTAATGATCTTCATCCGCTCGGCCACCTG
 
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JMFN003M22+           GAAGTTGCCGAAGTCCTGCTCCCGGACCCGGCACTCCTCCCTAACCCCGATTATCCGATT
JMFS052F07+           GAAGTTGCCGAAGTCCTGCTCCCGGACCCGGCACTCCTCCCTAACCCCGATTATCCGATT
JMFN031O17+           GAAGTTGCCGAAGTCCTGCTCCCGGACCCGGCACTCCTCCCTAACCCCGATTATCCGATT
                      ____________________________________________________________
consensus             GAAGTTGCCGAAGTCCTGCTCCCGGACCCGGCACTCCTCCCTAACCCCGATTATCCGATT
 
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JMFN003M22+           CCTGGGAAAAGCCCGACCGATCTCACGGAGAGTGGAGCGCGTGCGCTCGTAAGGTGAGAC
JMFS052F07+           CCTGGGAAAAGCCCGACCGATCTCACGGAGAGTGGAGCGCGTGCGCTCGTAAGGTGAGAC
JMFN031O17+           CCTGGGAAAAGCCCGACCGATCTCACGGAGAGTGGAGCGCGTGCGCTCGTAAGGTGAGAC
                      ____________________________________________________________
consensus             CCTGGGAAAAGCCCGACCGATCTCACGGAGAGTGGAGCGCGTGCGCTCGTAAGGTGAGAC
 
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JMFN003M22+           GTAAAAGTAGACCTTCCAGTTCCTGGAGGCGCCATGATCGGAGACAACGAGCTGGATGTT
JMFS052F07+           GTAAAAGTAGACCTTCCAGTTCCTGGAGGCGCCATGATCGGAGACAACGAGCTGGATGTT
JMFN031O17+           GTAAAAGTAGACCTTCCAGTTCCTGGAGGCGCCATGATCGGAGACAACGAGCTGGATGTT
                      ____________________________________________________________
consensus             GTAAAAGTAGACCTTCCAGTTCCTGGAGGCGCCATGATCGGAGACAACGAGCTGGATGTT
 
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JMFN003M22+           GGAGCCGGCCCGGTTGGCCTGCTCGATCCCATGAGGCGTCAATGGTATCTTGTAGTCAGG
JMFS052F07+           GGAGCCGGCCCGGTTGGCCTGCTCGATCCCATGAGGCGTCAATGGTATCTTGTAGTCAGG
JMFN031O17+           GGAGCCGGCCCGGTTGGCCTGCTCGATCCCATGAGGCGTCAATGGTATCTTGTAGTCAGG
                      ____________________________________________________________
consensus             GGAGCCGGCCCGGTTGGCCTGCTCGATCCCATGAGGCGTCAATGGTATCTTGTAGTCAGG
 
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JMFN003M22+           GGTTACGGTGTAGGCGGCGTCGTCCTTGTTGCCTTGGCTCTC                  
JMFS052F07+           GGTTACGGTGTAGGCGGCGTCGTCCTTGTTGCCTTGGCTCTCGCCGTGGCGCACTAAGAT
JMFN031O17+           GGTTACGGTGTAGGCGGCGTCGTCCTTGTTGCCTTGGCTCTCGCCGTGGCGCACTAAGAT
                      ____________________________________________________________
consensus             GGTTACGGTGTAGGCGGCGTCGTCCTTGTTGCCTTGGCTCTCGCCGTGGCGCACTAAGAT
 
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JMFS052F07+           TATGCGTTTAGGGAGAAGCTTTTGGTGATTCTGATGGAGTTGCCCAGTATCACCGGCAGT
JMFN031O17+           TATGCGTTTAGGGAGAAGCTTTTGGTGATTCTGATGGAGTTGCCCAGTATCACCGGCAGT
                      ____________________________________________________________
consensus             TATGCGTTTAGGGAGAAGCTTTTGGTGATTCTGATGGAGTTGCCCAGTATCACCGGCAGT
 
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JMFS052F07+           CAACATTCTTCGCTGAAATTTGGGAAAGATGAAGAGAAATGGGATTGGATTGGG      
JMFN031O17+           CAACATTCTTCGCTGAAATTTGGGAAAGATGAAGAGAAATGGGATTGGATTGGGGGGATA
                      ____________________________________________________________
consensus             CAACATTCTTCGCTGAAATTTGGGAAAGATGAAGAGAAATGGGATTGGATTGGGGGGATA