| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018G24 | Sequence | 492 | 006144 (11) | emb|CDP19696.1| | 2e-82 | unnamed protein product [Coffea canephora] | 767 | 006144 (11) | emb|CDP19696.1| | 3e-117 | unnamed protein product [Coffea canephora] |
| JMFN008H18 | Sequence | 626 | 006144 (11) | emb|CDP19696.1| | 8e-121 | unnamed protein product [Coffea canephora] | |||||
| JMFN012M10 | Sequence | 459 | 006144 (11) | ref|XP_007216004.1| | 2e-47 | hypothetical protein PRUPE_ppa011953mg [Prunus persica] gb|EMJ17203.1| hypotheti | |||||
| JMFN019M12 | Sequence | 634 | 006144 (11) | emb|CDP19696.1| | 4e-123 | unnamed protein product [Coffea canephora] | |||||
| JMFN040P03 | Sequence | 629 | 006144 (11) | emb|CDP19696.1| | 2e-122 | unnamed protein product [Coffea canephora] | |||||
| JMFS061G12 | Sequence | 618 | 006144 (11) | emb|CDP19696.1| | 2e-117 | unnamed protein product [Coffea canephora] | |||||
| JMSF032I11 | Sequence | 703 | 006144 (11) | emb|CDP19696.1| | 1e-122 | unnamed protein product [Coffea canephora] | 749 | 006144 (11) | emb|CDP19696.1| | 2e-122 | unnamed protein product [Coffea canephora] |
| JMSF042I24 | Sequence | 733 | 006144 (11) | emb|CDP19696.1| | 1e-121 | unnamed protein product [Coffea canephora] | 713 | 006144 (11) | emb|CDP19696.1| | 8e-122 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF042I24- CAGCAGAAACTCAAAATGGGCTCCATATAGTTTTCTGCCATCTAA
____________________________________________________________
consensus CAGCAGAAACTCAAAATGGGCTCCATATAGTTTTCTGCCATCTAA
. : . : . : . : . : . :
JMSF042I24+ TTTGATATTAAACTACAAATTTCCAGTTTACATAACA
rJMSF042I24- CCAAACACTATGAATACCAAAATTTTGATATTAAACTACAAATTTCCAGTTTACATAACA
JMSF032I11+ ATATTAAACTACAAATTTCCAGTTTACATAACA
____________________________________________________________
consensus CCAAACACTATGAATACCAAAATTTTGATATTAAACTACAAATTTCCAGTTTACATAACA
. : . : . : . : . : . :
JMSF042I24+ AACGATGGAAACTAAGGTGTATTTCTTTAAGCATCCGTTATTGGGTACTCAAAGACAACA
rJMSF042I24- AACGATGGAAACTAAGGTGTATTTCTTTAAGCATCCGTTATTGGGTACTCAAAGACAACA
JMSF032I11+ AACGATGGAAANTAAGGTGTATTTCTTTAAGCATCCGTTATTGGGTACTCAAAGACAACA
JMFN040P03+ AGCATCCGTTATTGGGTACTCAAAGACAACA
rJMSF032I11- GGGTACTCAAAGACAACA
JMFN008H18+ GTACTCAAAGACAACA
JMFS061G12+ GACAACA
rJMFF018G24- GGGTACTCAAAGACAACA
JMFN012M10+ GGGTACTCAAAGACAACA
JMFN019M12+ TTAAGCATCCGTTATTGGGTACTCAAAGACAACA
____________________________________________________________
consensus AACGATGGAAACTAAGGTGTATTTCTTTAAGCATCCGTTATTGGGTACTCAAAGACAACA
. : . : . : . : . : . :
JMSF042I24+ TCTTTGCCCGAGAGCTTCCTGTAGACTGCGGAAAACGTTTCCAGCTTGTATTCAGTGTCA
rJMSF042I24- TCTTTGCCCGAGAGCTTCCTGTAGACTGCGGAAAACGTTTCCAGCTTGTATTCAGTGTCA
JMSF032I11+ TCTTTGCCCGAGAGCTTCCTGTAGACTGCGGAAAACGTTTCCAGCTTGTATTCAGTGTCA
JMFN040P03+ TCTTTGCCCGAGAGCTTCCTGTAGACTGCGGAAAACGTTTCCAGCTNGTATTCAGTGTCA
rJMSF032I11- TCTTTGCCCGAGAGCTTCCTGTAGACTGCGGAAAACGTTTCCAGCTTGTATTCAGTGTCA
JMFN008H18+ TCTTTGCCCGAGAGCTTCCTGTAGACTGCGGAAAACGTTTCCAGCTTGTATTCAGTGTCA
JMFS061G12+ TCTTTGCCCGAGAGCTTCCTGTAGACTGCGGANAACGTTTCCAGCTTGTATTCAGTGTCA
rJMFF018G24- TCTTTGCCCGAGAGCTTCCTGTAGACTGCGGAAAACGTTTCCAGCTTGTATTCAGTGTCA
JMFN012M10+ TCTTTGCCCGAGAGCTTCCTGTAGACTGCGGAAAACGTTTCCAGCTTGTATTCAGTGTCA
JMFN019M12+ TCTTTGCCCGAGAGCTTCCTGTAGACTGCGGAAAACGTTTCCAGCTTGTATTCAGTGTCA
____________________________________________________________
consensus TCTTTGCCCGAGAGCTTCCTGTAGACTGCGGAAAACGTTTCCAGCTTGTATTCAGTGTCA
. : . : . : . : . : . :
JMSF042I24+ TTCTTCTGCTTTGGGTCCAAGAAAACCTTCATTATCTTGGATCCATCAAGGCGATATCTA
rJMSF042I24- TTCTTCTGCTTTGGGTCCAAGAAAACCTTCATTATCTTGGATCCATCAAGGCGATATCTA
JMSF032I11+ TTCTTCTGCTTTGGGTCCAAGAAAACCTTCATTATCTTGGATCCATCAAGGCGATATCTA
JMFN040P03+ TTCTTCTGCTTTGGGTCCAAGAAAACCTTCATTATCTTGGATCCATCAAGGCGATATCTA
rJMSF032I11- TTCTTCTGCTTTGGGTCCAAGAAAACCTTCATTATCTTGGATCCATCAAGGCGATATCTA
JMFN008H18+ TTCTTCTGCTTTGGGTCCAAGAAAACCTTCATTATCTTGGATCCATCAAGGCGATATCTA
JMFS061G12+ TTCTTCTGCTTTGGGTCCAAGAAAACCTTCATTATCTTGGATCCATCAAGGCGATATCTA
rJMFF018G24- TTCTTCTGCTTTGGGTCCAAGAAAACCTTCATTATCTTGGATCCATCAAGGCGATATCTA
JMFN012M10+ TTCTTCTGCTTTGGGTCCAAGAAAACCTTCATTATCTTGGATCCATCAAGGCGATATCTA
JMFN019M12+ TTCTTCTGCTTTGGGTCCAAGAAAACCTTCATTATCTTGGATCCATCAAGGCGATATCTA
____________________________________________________________
consensus TTCTTCTGCTTTGGGTCCAAGAAAACCTTCATTATCTTGGATCCATCAAGGCGATATCTA
. : . : . : . : . : . :
JMSF042I24+ ACCCGCTTGCCAACAATCTCGGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
rJMSF042I24- ACCCGCTTGCCAACAATCTCGGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
JMSF032I11+ ACCCGCTTGCCAACAATCTCGGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
JMFN040P03+ ACCCGCTTGCCAACAATCTCGGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
rJMSF032I11- ACCCGCTTGCCAACAATCTCGGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
JMFF018G24+ GGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
JMFN008H18+ ACCCGCTTGCCAACAATCTCGGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
JMFS061G12+ ACCCGCTTGCCAACAATCTCGGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
rJMFF018G24- ACCCGCTTGCCAACAATCTCGGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
JMFN012M10+ ACCCGCTTGCCAACAATCTCGGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
JMFN019M12+ ACCCGCTTGCCAACAATCTCGGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
____________________________________________________________
consensus ACCCGCTTGCCAACAATCTCGGCTGGGACAACAACATCTTCCAACATTGCTTCGTGAACA
. : . : . : . : . : . :
JMSF042I24+ GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACTTCTCTTCGGAGGCCTCACA
rJMSF042I24- GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACTTCTCTTCGGAGGCCTCACA
JMSF032I11+ GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACCTCTCTTCGGAGGCCTCACA
JMFN040P03+ GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACCTCTCTTCGGAGGCCTCACA
rJMSF032I11- GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACCTCTCTTCGGAGGCCTCACA
JMFF018G24+ GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACCTCTCTTCGGAGGCCTCACA
JMFN008H18+ GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACCTCTCTTCGGAGGCCTCACA
JMFS061G12+ GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACCTCTCTTCGGAGGCCTCACA
rJMFF018G24- GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACCTCTCTTCGGAGGCCTCACA
JMFN012M10+ GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACCTC
JMFN019M12+ GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACCTCTCTTCGGAGGCCTCACA
____________________________________________________________
consensus GCGGTTAGTGTCCTGCTACGTGGGCGTTGAACAGCTGAACCTCTCTTCGGAGGCCTCACA
. : . : . : . : . : . :
JMSF042I24+ ATCCTTCTTGTAGCAATCAGAACAACATCCTTCCCACTGAATTTCTTCTCTAGTTCCCTA
rJMSF042I24- ATCCTTCTTGTAGCAATCAGAACAACATCCTTCCCACTGAATTTCTTCTCTAGTTCCCTA
JMSF032I11+ ATCCTTCTTGTAGCAATCAGAACAACATCCTTCCCACTGAATTTCTTCTCTAGTTCCCTA
JMFN040P03+ ATCCTTCTTGTAGCAATCAGAACAACATCCTTCCCACTGAATTTCTTCTCTAGTTCCCTA
rJMSF032I11- ATCCTTCTTGTAGCAATCAGAACAACATCCTTCCCACTGAATTTCTTCTCTAGTTCCCTA
JMFF018G24+ ATCCTTCTTGTAGCAATCAGAACAACATCCTTCCCACTGAATTTCTTCCCTAGTTCCCTA
JMFN008H18+ ATCCTTCTTGTAGCAATCAGAACAACATCCTTCCCACTGAATTTCTTCTCTAGTTCCCTA
JMFS061G12+ ATCCTTCTTGTAGCAATCAGAACAACATCCTTCCCACTGAATTTCTTCTCTAGTTCCCTA
rJMFF018G24- ATCCTTCTTGTAGCAATCAGAACAACATCCTTCCCACTGAATTTCTTCCCTAGTTCCCTA
JMFN019M12+ ATCCTTCTTGTAGCAATCAGAACAACATCCTTCCCACTGAATTTCTTCTCTAGTTCCCTA
____________________________________________________________
consensus ATCCTTCTTGTAGCAATCAGAACAACATCCTTCCCACTGAATTTCTTCTCTAGTTCCCTA
. : . : . : . : . : . :
JMSF042I24+ ACAAGTCTAACATGAATCTTTCGGAAGGCCTTTCTCAGCCTGTAAGGCACATTGATCACA
rJMSF042I24- ACAAGTCTAACATGAATCTTTCGGAAGGCCTTTCTCAGCCTGTAAGGCACATTGATCACA
JMSF032I11+ ACAAGTCTAACATGAATCTTTCGGAAGGCCTTTCTCAGCCTGTAAGGCACATTGATCACA
JMFN040P03+ ACAAGTCTAACATGAATCTTTCGGAAGGCCTTTCTCAGCCTGTAAGGCACATTGATCACA
rJMSF032I11- ACAAGTCTAACATGAATCTTTCGGAAGGCCTTTCTCAGCCTGTAAGGCACATTGATCACA
JMFF018G24+ ACAAGTCTAACATGAATCTTTCGGAAGGCCTTTCTCAGCCTGTAAGGCACATTGATCACA
JMFN008H18+ ACAAGTCTAACATGAATCTTTCGGAAGGCCTTTCTCAGCCTGTAAGGCACATTGATCACA
JMFS061G12+ ACAAGTCTAACATGAATCTTTCGGAAGGCCTTTCTCAGCCTGTAAGGCACATTGATCACA
rJMFF018G24- ACAAGTCTAACATGAATCTTTCGGAAGGCCTTTCTCAGCCTGTAAGGCACATTGATCACA
JMFN019M12+ ACAAGTCTAACATGAATCTTTCGGAAGGCCTTTCTCAGCCTGTAAGGCACATTGATCACA
____________________________________________________________
consensus ACAAGTCTAACATGAATCTTTCGGAAGGCCTTTCTCAGCCTGTAAGGCACATTGATCACA
. : . : . : . : . : . :
JMSF042I24+ ACAGCCTTCCTGCTTCCTGAAACATCAATTTGTATAGCAGAATTGATGTAGAGGTCCTTC
rJMSF042I24- ACAGCCTTCCTGCTTCCTGAAACATCAATTTGTATAGCAGAATTGATGTAGAGGTCCTTC
JMSF032I11+ ACAGCCTTCCTGCTTCCTGAAACATCAATTTGTATAGCAGAATTGATGTAGAGGTCCTTC
JMFN040P03+ ACAGCCTTCCTGCTTCCTGAAACATCAATTTGTATAGCAGAATTGATGTAGAGGTCCTTC
rJMSF032I11- ACAGCCTTCCTGCTTCCTGAAACATCAATTTGTATAGCAGAATTGATGTAGAGGTCCTTC
JMFF018G24+ ACAGCCTTCCTGCTTCCTGAAACATCAATTTGTATAGCAGAATTGATGTAGAGGTCCTTC
JMFN008H18+ ACAGCCTTCCTGCTTCCTGAAACATCAATTTGTATAGCAGAATTGATGTAGAGGTCCTTC
JMFS061G12+ ACAGCCTTCCTGCTTCCTGAAACATCAATTTGTATAGCAGAATTGATGTAGAGGTCCTTC
rJMFF018G24- ACAGCCTTCCTGCTTCCTGAAACATCAATTTGTATAGCAGAATTGATGTAGAGGTCCTTC
JMFN019M12+ ACAGCCTTCCTGCTTCCTGAAACATCAATTTGTATAGCAGAATTGATGTAGAGGTCCTTC
____________________________________________________________
consensus ACAGCCTTCCTGCTTCCTGAAACATCAATTTGTATAGCAGAATTGATGTAGAGGTCCTTC
. : . : . : . : . : . :
JMSF042I24+ AAGTCACTTTTGAGCTCTTGGTTAGTGTTCTCCAAATCAAACAAGGCCTGTGCTACAGTT
rJMSF042I24- AAGTCACTTTTGAGCTCTTGGTTAGTGTTCTCCAAATCAAACAAGGCCTGTGCTACAGTT
JMSF032I11+ AAGTCACTTTTGAGCTCTTGGTTAGTGTTCTCCAAATCAAACAAGGCCTGTGCTACAGTT
JMFN040P03+ AAGTCACTTTTGAGCTCTTGGTTAGTGTTCTCCAAATCAAACAAGGCCTGTGCTACAGTT
rJMSF032I11- AAGTCACTTTTGAGCTCTTGGTTAGTGTTCTCCAAATCAAACAAGGCCTGTGCTACAGTT
JMFF018G24+ AAGTCACTTTTGAGCTCTTGGTTAGTGTTCTCCAAATCAAACAAGGCCTGTGCTACAGTT
JMFN008H18+ AAGTCACTTTTGAGCTCTTGGTTAGTGTTCTCCAAATCAAACAAGGCCTGTGCTACAGTT
JMFS061G12+ AAGTCACTTTTGAGCTCTTGGTTAGTGTTCTCCAAATCAAACAAGGCCTGTGCTACAGTT
rJMFF018G24- AAGTCACTTTTGAGCTCTTGGTTAGTGTTCTCCAAATCAAACAAGGCCTGTGCTACAGTT
JMFN019M12+ AAGTCACTTTTGAGCTCTTGGTTAGTGTTCTCCAAATCAAACAAGGCCTGTGCTACAGTT
____________________________________________________________
consensus AAGTCACTTTTGAGCTCTTGGTTAGTGTTCTCCAAATCAAACAAGGCCTGTGCTACAGTT
. : . : . : . : . : . :
JMSF042I24+ TCCTCAAACTCAGTAGGCTCTGCATCCTTATCCTTGTGGATTTTTGTCTTTGAGGTATAC
rJMSF042I24- TCCTCAAACTCAGTAGGCTCTGCATCCTTATCCTTGTGGATTTTTGTCTTTGAGGTATAC
JMSF032I11+ TCCTCAAACTCAGTAGGCTCTGCATCCTTATCCTTGTGGATTTTTGTCTTTGAGGTATAC
JMFN040P03+ TCCTCAAACTCAGTAGGCTCTGCATCCTTATCCTTGTGGATTTTTGTCTTTGAGGTATAC
rJMSF032I11- TCCTCAAACTCAGTAGGCTCTGCATCCTTATCCTTGTGGATTTTTGTCTTTGAGGTATAC
JMFF018G24+ TCCTCAAACTCAGTAGGCTCTGCATCCTTATCCTTGTGGATTTTTGTCTTTGAGGTATAC
JMFN008H18+ TCCTCAAACTCAGTAGGCTCTGCATCCTTATCCTTGTGGATTTTTGTCTTTGAGGTATAC
JMFS061G12+ TCCTCAAACTCAGTAGGCTCTGCATCCTTATCCTTGTGGATTTTTGTCTTTGAGGTATAC
rJMFF018G24- TCCTCAAACTCAGTANGCTCTGCATCCTTATCCTTGGGGATTTTTGTCTTTGAGGNATAC
JMFN019M12+ TCCTCAAACTCAGTAGGCTCTGCATCCTTATCCTTGTGGATTTTTGTCTTTGAGGTATAC
____________________________________________________________
consensus TCCTCAAACTCAGTAGGCTCTGCATCCTTATCCTTGTGGATTTTTGTCTTTGAGGTATAC
. : . : . : . : . : . :
JMSF042I24+ ATC
rJMSF042I24- ATCGCTCA
JMSF032I11+ ATCGCTCAGAGAT
JMFN040P03+ ATCGCTCAGAGATCTCAGCTCCTGCTGATGAGAGTGGATCTGCGATAGCCTCAATCAG
rJMSF032I11- ATCGCTCAGAG
JMFF018G24+ ATC
JMFN008H18+ ATCGCTCAGAGAT
JMFS061G12+ ATCGCTCAGAGAT
rJMFF018G24- ATCGCTCAGAG
JMFN019M12+ ATCGCTCAGAGATCTCAGCTCCTGCTGATGAGAGTGGATCTGCGATAGCCTCAATCAGCA
____________________________________________________________
consensus ATCGCTCAGAGATCTCAGCTCCTGCTGATGAGAGTGGATCTGCGATAGCCTCAATCAGCA