Contig 006142:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF049C21-                                                               AAAACACA
                      ____________________________________________________________
consensus                                                                 AAAACACA
 
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JMFF049C21-           CAGGCTCTCAAATCCTAGACATATCTTCCAAACGAAAATATTCTCCTACTTTCAGACAAA
                      ____________________________________________________________
consensus             CAGGCTCTCAAATCCTAGACATATCTTCCAAACGAAAATATTCTCCTACTTTCAGACAAA
 
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JMFF049C21-           TTAAGGTTTCTGAAATGGCGAGGTTTGCATTCTGTTACGCAGTGATTCTTGGAGTGCTGG
JMFN018I12+                                                            TGGAGTGCTGG
                      ____________________________________________________________
consensus             TTAAGGTTTCTGAAATGGCGAGGTTTGCATTCTGTTACGCAGTGATTCTTGGAGTGCTGG
 
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JMFF049C21-           TGGTGGAAGCCATGGCGGCCGGATCTGCAGATTCGGAGGCGTACCCAAGGAAGCTTATGG
JMFN018I12+           TGGTGGAAGCCATGGCGGCCGGATCTGCAGATTCGGAGGCGTACCCAAGGAAGCTTATGG
                      ____________________________________________________________
consensus             TGGTGGAAGCCATGGCGGCCGGATCTGCAGATTCGGAGGCGTACCCAAGGAAGCTTATGG
 
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JMFF049C21-           CCAACAGATCATTGTTGTCAACACTACAGCAGAGTAGAACAGAGAGAAGCGCGGCAGATC
JMFN018I12+           CCAACAGATCATTGTTGTCAACACTACAGCAGAGTAGAACAGAGAGAAGCGCGGCAGATC
                      ____________________________________________________________
consensus             CCAACAGATCATTGTTGTCAACACTACAGCAGAGTAGAACAGAGAGAAGCGCGGCAGATC
 
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JMFF049C21-           CGCCGCTTCCCGGCGCCGCCCAGGAGTCGCCTTCCGAAGGAAAAGGAGAGGCCGGAGCTC
JMFN018I12+           CGCCGCTTCCCGGCGCCGCCCAGGAGTCGCCTTCCGAAGGAAAAGGAGAGGCCGGAGCTC
                      ____________________________________________________________
consensus             CGCCGCTTCCCGGCGCCGCCCAGGAGTCGCCTTCCGAAGGAAAAGGAGAGGCCGGAGCTC
 
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JMFF049C21-           CGGAGAGTCTGGAAACGGCGGAGCACCACCACTCTGATAAGTCGGTTGCTGGTGGAGGAG
JMFN018I12+           CGGAGAGTCTGGAAACGGCGGAGCACCACCACTCTGATAAGTCGGTTGCTGGTGGAGGAG
                      ____________________________________________________________
consensus             CGGAGAGTCTGGAAACGGCGGAGCACCACCACTCTGATAAGTCGGTTGCTGGTGGAGGAG
 
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JMFF049C21-           TCATCATCGGCGGGCTTGCCACCGCCATTATCGCCGCTGTCTATTGCTACATTCGCGTCA
rJMFF049C21+                              ACCGCCATTATCGCCGCTGTTTATTGCTACATTCGCGTCA
JMFN018I12+           TCATCATCGGCGGGCTTGCCACCGCCATTATCGCCGCTGTCTATTGCTACATTCGCGTCA
                      ____________________________________________________________
consensus             TCATCATCGGCGGGCTTGCCACCGCCATTATCGCCGCTGTCTATTGCTACATTCGCGTCA
 
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JMFF049C21-           CACGTAAAAGAGTAGATGGTGATCAAAGAAGCGTGTATTGATTTTTCT            
rJMFF049C21+          CACGTAAAAGAGTAGATGGTGATCAAAGAAGCGTGTATTGATTTTTCTTTATTTTTGGGA
JMFN018I12+           CACGTAAAAGAGTAGATGGTGATCAAAGAAGCGTGTATTGATTTTTCTTTATTTTTTGGA
                      ____________________________________________________________
consensus             CACGTAAAAGAGTAGATGGTGATCAAAGAAGCGTGTATTGATTTTTCTTTATTTTTTGGA
 
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rJMFF049C21+          GAGGTAAAAAGTTATATTAAAAACAAAAAAAGAGTACGTGAATAGAATAGGTAGATTAGG
JMFN018I12+           GAGGTAAAAAGTTATATTAAAAACAAAAAAAGAGTACGTGAATAGAATAGTTAGATTAGG
                      ____________________________________________________________
consensus             GAGGTAAAAAGTTATATTAAAAACAAAAAAAGAGTACGTGAATAGAATAGTTAGATTAGG
 
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rJMFF049C21+          GTAGAATTATTGGCCTATGGTGTAAGTAGTAGATGGAAAATTAATGCAGCATAAGAAAAT
JMFN018I12+           TTAGAATTATTGGCCTATGGTGTAAGTAGTAGATGGAAAATTAATGCAGCATAAGAAAAT
                      ____________________________________________________________
consensus             TTAGAATTATTGGCCTATGGTGTAAGTAGTAGATGGAAAATTAATGCAGCATAAGAAAAT
 
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rJMFF049C21+          TATTT                                                       
JMFN018I12+           TATTTATGGTTCGCCTTGAATGTTTATTTGAAAATAAGGATATTTATTATTGCTTGCTGT
                      ____________________________________________________________
consensus             TATTTATGGTTCGCCTTGAATGTTTATTTGAAAATAAGGATATTTATTATTGCTTGCTGT