Contig 006137:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN013A10Sequence623006137 (4)ref|XP_006360048.1|6e-48PREDICTED: anther-specific protein LAT52-like [Solanum tuberosum]
JMFN019I07Sequence627006137 (4)ref|XP_006360048.1|1e-47PREDICTED: anther-specific protein LAT52-like [Solanum tuberosum]
JMFN037I07Sequence613006137 (4)ref|XP_006360048.1|5e-48PREDICTED: anther-specific protein LAT52-like [Solanum tuberosum]
JMFN044C10Sequence484006137 (4)ref|XP_006360048.1|5e-29PREDICTED: anther-specific protein LAT52-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN044C10+ AGAGAGTATAACTAGTTAATAACATTAGCAATCAACCAAGT
                      ____________________________________________________________
consensus AGAGAGTATAACTAGTTAATAACATTAGCAATCAACCAAGT
 
. : . : . : . : . : . :
JMFN044C10+ TCATATATACATGAGTGTATGAAAGTAGTTCTTGTTATAACTTGGAATTTATTCAATCAA
                      ____________________________________________________________
consensus TCATATATACATGAGTGTATGAAAGTAGTTCTTGTTATAACTTGGAATTTATTCAATCAA
 
. : . : . : . : . : . :
JMFN044C10+ ATCAAACGAAGTACACATACAATGAAGAAGAGAAGTGGTAGTGAATGATGTTGTTGATGA
JMFN019I07+ TAGTGAATGATGTTGTTGATGA
JMFN037I07+ TAGTGAATGATGTTGTTGATGA
JMFN013A10+ TAGTGAATGATGTTGTTGATGA
                      ____________________________________________________________
consensus ATCAAACGAAGTACACATACAATGAAGAAGAGAAGTGGTAGTGAATGATGTTGTTGATGA
 
. : . : . : . : . : . :
JMFN044C10+ GGAGAAGCAAAGAAAATCACATCATGTTTTCATTAGAGGAGAAATTGATCTCCTCCAAGA
JMFN019I07+ GGAGAAGCAAAGAAAATCACATCATGTTTTCATTAGAGGAGAAATTGATCTCCTCCAAGA
JMFN037I07+ GGAGAAGCAAAGAAAATCACATCATGTTTTCATTAGAGGAGAAATTGATCTCCTCCAAGA
JMFN013A10+ GGAGAAGCAAAGAAAATCACATCATGTTTTCATTAGAGGAGAAATTGATCTCCTCCAAGA
                      ____________________________________________________________
consensus GGAGAAGCAAAGAAAATCACATCATGTTTTCATTAGAGGAGAAATTGATCTCCTCCAAGA
 
. : . : . : . : . : . :
JMFN044C10+ CTTTGTGGCACCTCTCATCAGCTTTGTTTTTCATGAAGAAGAGCGGGTTAGCATAGCGGA
JMFN019I07+ CTNTGTGGCACCTCTCATCAGCTTTGTTTTTCATGAAGAAGAGCGGGTTAGCATAGCGGA
JMFN037I07+ CTTTGTGGCACCTCTCATCAGCTTTGTTTTTCATGAAGAAGAGCGGGTTAGCATAGCGGA
JMFN013A10+ CTTTGTGGCACCTCTCATCAGCTTTGTTTTTCATGAAGAAGAGCGGGTTAGCATAGCGGA
                      ____________________________________________________________
consensus CTTTGTGGCACCTCTCATCAGCTTTGTTTTTCATGAAGAAGAGCGGGTTAGCATAGCGGA
 
. : . : . : . : . : . :
JMFN044C10+ TGGAGCCGTTCACTCCAACGTTTTCCGTGCAAACCACCGTGGCCTTCTCCAACCCCGCCA
JMFN019I07+ TGGAGCCGTTCACTCCAACGTTTTCCGTGCAAACCACCGTGGCCTTCTCCAACCCCGCCA
JMFN037I07+ TGGAGCCGTTCACTCCAACGTTTTCCGTGCAAACCACCGTGGCCTTCTCCAACCCCGCCA
JMFN013A10+ TGGAGCCGTTCACTCCAACGTTTTCCGTGCAAACCACCGTGGCCTTCTCCAACCCCGCCA
                      ____________________________________________________________
consensus TGGAGCCGTTCACTCCAACGTTTTCCGTGCAAACCACCGTGGCCTTCTCCAACCCCGCCA
 
. : . : . : . : . : . :
JMFN044C10+ TCGTCTCCTTGCAATCCTCCTTGGGGCTCTTCACCACCGTCACCTCGCACGTATCGTTCT
JMFN019I07+ TCGTCTCCTTGCAATCCTCCTTGGGGCTCTTCACCACCGTCACCTCGCACGTATCGTTCT
JMFN037I07+ TCGTCTCCTTGCAATCCTCCTTGGGGCTCTTCACCACCGTCACCTCGCACGTATCGTTCT
JMFN013A10+ TCGTCTCCTTGCAATCCTCCTTGGGGCTCTTCACCACCGTCACCTCGCACGTATCGTTCT
                      ____________________________________________________________
consensus TCGTCTCCTTGCAATCCTCCTTGGGGCTCTTCACCACCGTCACCTCGCACGTATCGTTCT
 
. : . : . : . : . : . :
JMFN044C10+ CGTGCTCTCTATCCACGCTCAAATTATACTTCCCGTCGGCTCCCGTCTCGCCTTCCGCGC
JMFN019I07+ CGTGCTCTCTATCCACGCTCAAATTATACTTCCCGTCGGCTCCCGTCTCGCCTTCCGCGC
JMFN037I07+ CGTGCTCTCTATCCACGCTCAAATTATACTTCCCGTCGGCTCCCGTCTCGCCTTCCGCGC
JMFN013A10+ CGTGCTCTCTATCCACGCTCAAATTATACTTCCCGTCGGCTCCCGTCTCGCCTTCCGCGC
                      ____________________________________________________________
consensus CGTGCTCTCTATCCACGCTCAAATTATACTTCCCGTCGGCTCCCGTCTCGCCTTCCGCGC
 
. : . : . : . : . : . :
JMFN044C10+ TATAGGTCACGGTCTCGTTGTCT
JMFN019I07+ TATAGGTCACGGTCTCGTTGTCTGTGTTTTTGCAGTCCAAGCGCACAACCACGCCCGCCA
JMFN037I07+ TATAGGTCACGGTCTCGTTGTCTGTGTTTTTGCAGTCCAAGCGCACAACCACGCCCGCCA
JMFN013A10+ TATAGGTCACGGTCTCGTTGTCTGTGTTTTTGCAGTCCAAGCGCACAACCACGCCCGCCA
                      ____________________________________________________________
consensus TATAGGTCACGGTCTCGTTGTCTGTGTTTTTGCAGTCCAAGCGCACAACCACGCCCGCCA
 
. : . : . : . : . : . :
JMFN019I07+ TGTACTCGCTGATTCTGGTCTGGAACTGGACGCGGCAGGTGTCGCAGTAGACCTTGCCGC
JMFN037I07+ TGTACTCGCTGATTCTGGTCTGGAACTGGACGCGGCAGGTGTCGCAGTAGACCTTGCCGC
JMFN013A10+ TGTACTCGCTGATTCTGGTCTGGAACTGGACGCGGCAGGTGTCGCAGTAGACCTTGCCGC
                      ____________________________________________________________
consensus TGTACTCGCTGATTCTGGTCTGGAACTGGACGCGGCAGGTGTCGCAGTAGACCTTGCCGC
 
. : . : . : . : . : . :
JMFN019I07+ GGACGGTGAATTTCTCGGCGGGGGCGCCGTGGACGGAGGTGGTGGCGAGGGCCAGAATGG
JMFN037I07+ GGACGGTGAATTTCTCGGCGGGGGCGCCGTGGACGGAGGTGGTGGCGAGGGCCAGAATGG
JMFN013A10+ GGACGGTGAATTTCTCGGCGGGGGCGCCGTGGACGGAGGTGGTGGCGAGGGCCAGAATGG
                      ____________________________________________________________
consensus GGACGGTGAATTTCTCGGCGGGGGCGCCGTGGACGGAGGTGGTGGCGAGGGCCAGAATGG
 
. : . : . : . : . : . :
JMFN019I07+ AGAGAGCGGAGATGAGTGCAACAACAGCCACCCTTGCCATTATTTTTGGTTTCTTGGATG
JMFN037I07+ AGAGAGCGGAGATGAGTGCAACAACAGCCACCCTTGCCATTATTTTTGGTTTCTTGGATG
JMFN013A10+ AGAGAGCGGAGATGAGTGCAACAACAGCCACCCTTGCCATTATTTTTGGTTTCTTGGATG
                      ____________________________________________________________
consensus AGAGAGCGGAGATGAGTGCAACAACAGCCACCCTTGCCATTATTTTTGGTTTCTTGGATG
 
. : . : . : . : . : . :
JMFN019I07+ GCCTGGTTTGGTTTTATTGATTGGTGGGTGGCTGTACTTCTTTTCTACTCTTCTATTGAT
JMFN037I07+ GCCTGGTTTGGTTTTATTGATTGGTGGGTGGCTGTACTTCTTTTCTACTCT
JMFN013A10+ GCCTGGTTTGGTTTTATTGATTGGTGGGTGGCTGTACTTCTTTTCTACTCTTCTATTGAT
                      ____________________________________________________________
consensus GCCTGGTTTGGTTTTATTGATTGGTGGGTGGCTGTACTTCTTTTCTACTCTTCTATTGAT