Contig 006136:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF035L12-                       AAGTTATGGAAGTGCTTTAATATAAGAGTTTCCTACAGACTTGGCAA
                      ____________________________________________________________
consensus                          AAGTTATGGAAGTGCTTTAATATAAGAGTTTCCTACAGACTTGGCAA
 
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rJMFF035L12-          GACATTCTAGCCTGCCATATATAGATGGTCTACTTATATAAAAGTGTTCTTCATTATTGT
                      ____________________________________________________________
consensus             GACATTCTAGCCTGCCATATATAGATGGTCTACTTATATAAAAGTGTTCTTCATTATTGT
 
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rJMFF035L12-          CTCATGAACTAAAACGCAAAATATATAGAATAATCAGTTAACATCTAGTCGTCCATTCCA
JMFN012A15+                                            TCAGTTAACATCTAGTCGTCCATTCCA
                      ____________________________________________________________
consensus             CTCATGAACTAAAACGCAAAATATATAGAATAATCAGTTAACATCTAGTCGTCCATTCCA
 
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rJMFF035L12-          TCTCCAACTTGGCTACATATGGGACTAACAGCAGAGAAAGATCTCTCAAATGGTGATGGA
JMFN012A15+           TCTCCAACTTGGCTACATATGGGACTAACACTAGAGAAAGATCTCTCAAATGGTGATGGA
                      ____________________________________________________________
consensus             TCTCCAACTTGGCTACATATGGGACTAACAGTAGAGAAAGATCTCTCAAATGGTGATGGA
 
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rJMFF035L12-          TGGAATGTTGCATCCCGTCTGCGCTTAAAAGCACAGCTGTCAGAGGGTGAACTATCAGCA
JMFF035L12+           TGGAATGTTGCATCCCGTCTGCGCTTAAAAGCACAGCTGTCAGAGGGTGAACTATCAGCA
JMFN012A15+           TGGAATGTTGCATCCCGTCTGCGCTTAAAAGCACAGCTGTCAGAGGGTGAACTATCAGCA
                      ____________________________________________________________
consensus             TGGAATGTTGCATCCCGTCTGCGCTTAAAAGCACAGCTGTCAGAGGGTGAACTATCAGCA
 
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rJMFF035L12-          TCAAACTTCCTCCGTATACCTTTCACAGCCTGCTCTTCAGCCGGTGTAAATGGAAAAATC
JMFF035L12+           TCAAACTTCCTCCGTATACCTTTCACAGCCTGCTCTTCAGCCGGTGTAAATGGAAAAATC
JMFN012A15+           TCAAACTTCCTCCGTATACCTTTCACAGCCTGCTCTTCAGCCGGTGTAAATGGAAAAATC
                      ____________________________________________________________
consensus             TCAAACTTCCTCCGTATACCTTTCACAGCCTGCTCTTCAGCCGGTGTAAATGGAAAAATC
 
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rJMFF035L12-          TGCTTGCTCACTCTGCAGAGGGAGCTATGATTGTCATACAAAATTCTCTGATTACAGTTT
JMFF035L12+           TGCTTGCTCACTCTGCAGAGGGAGCTATGATTGTCATACAAAATTCTCTGATTACAGTTT
JMFN012A15+           TGCTTGCTCACTCTGCAGAGGGAGCTATGATTGTCATACAAAATTCTCTGATTACAGTTT
                      ____________________________________________________________
consensus             TGCTTGCTCACTCTGCAGAGGGAGCTATGATTGTCATACAAAATTCTCTGATTACAGTTT
 
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rJMFF035L12-          TTGTCACAAATGTGGGTCACCCCAGTTAGTCTGCATCTGTACATGTTCCCACACACATGT
JMFF035L12+           TTGTCACAAATGTGGGTCACCCCAGTTAGTCTGCATCTGTACATGTTCCCACACACATGT
JMFN012A15+           TTGTCACAAATGTGGGTCACCCCAGTTAGTCTGCATCTGTACATGTTCCCACACACATGT
                      ____________________________________________________________
consensus             TTGTCACAAATGTGGGTCACCCCAGTTAGTCTGCATCTGTACATGTTCCCACACACATGT
 
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rJMFF035L12-          TCGTTTTCACATTTCCAATCGCACTTGTGAACAGGGTTTGGCCCATCTTGGCCAAGAATA
JMFF035L12+           TCGTTTTCACATTTCCAATCGCACTTGTGAACAGGGTTTGGCCCATCTTGGCCAAGAATA
JMFN012A15+           TCGTTTTCACATTTCCAATCGCACTTGTGAACAGGGTTTGGCCCATCTTGGCCAAGAATA
                      ____________________________________________________________
consensus             TCGTTTTCACATTTCCAATCGCACTTGTGAACAGGGTTTGGCCCATCTTGGCCAAGAATA
 
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rJMFF035L12-          CTTGACAGAAAAATAACATTTGTAGGCATGGCTACCATAGATTTGCCAAATACCTCCATT
JMFF035L12+           CTTGACAGAAAAATAACATTTGTAGGCATGGCTACCATAGATTTGCCAAATACCTCCATT
JMFN012A15+           CTTGACAGAAAAATAACATTTGTAGGCATGGCTACCATAGATTTGCCAAATACCTCCATT
                      ____________________________________________________________
consensus             CTTGACAGAAAAATAACATTTGTAGGCATGGCTACCATAGATTTGCCAAATACCTCCATT
 
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rJMFF035L12-          GCTAGCTTCAGTCTTCAAGAGCGAGCGAGCGAATCTCTGGTGAGTCCCACAACCTAGCTG
JMFF035L12+           GCTAGCTTCAGTCTTCAAGAGCGAGCGAGCGAATCTCTGGTGAGTCCCACAACCTAGCTG
JMFN012A15+           GCTAGCTTCAGTCTTCAAGAGCGAGCGAGCGAATCTCTGGTGAGTCCCACAACCTAGCTG
                      ____________________________________________________________
consensus             GCTAGCTTCAGTCTTCAAGAGCGAGCGAGCGAATCTCTGGTGAGTCCCACAACCTAGCTG
 
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rJMFF035L12-          CCCAGCGTTCAATGTCTGTGTAG                                     
JMFF035L12+           CCCAGCGTTCAATGTCTGTGTAGATCCCAGAGTACCGCCTTATCTCTCTCTCTCTCTCTC
JMFN012A15+           CCCAGCGTTCAATGTCTGTGTAGATCCCAGAGTACCGCCTTATCTCTCTCTCTCTCTCTC
                      ____________________________________________________________
consensus             CCCAGCGTTCAATGTCTGTGTAGATCCCAGAGTACCGCCTTATCTCTCTCTCTCTCTCTC
 
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JMFF035L12+           TAGCCTCCTTCTCTCTAGCTCTCTGCGCACCACGCCTACAGTGAAGCAAAAAAATG    
JMFN012A15+           TAGCCTCCTTCTCTCTAGCTCTCTGCGCACCACGCCTACAGTGAAGCAAAAAAATGGCGA
                      ____________________________________________________________
consensus             TAGCCTCCTTCTCTCTAGCTCTCTGCGCACCACGCCTACAGTGAAGCAAAAAAATGGCGA