Contig 006133:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003A17Sequence483005236 (6)ref|XP_006343667.1|2e-74PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like isoform709006133 (5)ref|XP_010323179.1|3e-117PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase isoform X1 [
JMFF007B13Sequence480005236 (6)ref|XP_006343668.1|7e-74PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like isoform672006133 (5)ref|XP_006343668.1|2e-113PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like isoform
JMFF033J20Sequence569005236 (6)ref|XP_006343668.1|1e-97PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like isoform666006133 (5)gb|KHN42807.1|1e-121NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Glycine soja]
JMFN010G17Sequence582006133 (5)gb|KCW80286.1|1e-97hypothetical protein EUGRSUZ_C016462, partial [Eucalyptus grandis]
JMSF040A08Sequence668005236 (6)ref|XP_006343668.1|3e-122PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like isoform837006133 (5)ref|XP_006343668.1|2e-154PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like isoform

Alignment

This contig is upended


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rJMSF040A08+                                                                   CAC
                      ____________________________________________________________
consensus                                                                      CAC
 
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rJMSF040A08+          TGGTATTGCAATCTNGAAAAAAAGCGGGGCATGGTNCCCGCTACAGATGGAGCTTGGAGG
                      ____________________________________________________________
consensus             TGGTATTGCAATCTNGAAAAAAAGCGGGGCATGGTNCCCGCTACAGATGGAGCTTGGAGG
 
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rJMSF040A08+          AAAGGACGCCTGTATTGTGCTCGAGGATGCTGACATAGATTTGGCAGCAGCAAATGTTGT
                      ____________________________________________________________
consensus             AAAGGACGCCTGTATTGTGCTCGAGGATGCTGACATAGATTTGGCAGCAGCAAATGTTGT
 
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rJMSF040A08+          CAAAGGAGGATTCTCTTACAGTGGTCAGAGGTGCACTGCGGTTAAGGTTGTCTTGGTGAT
rJMFF003A17+                                                             CTTGGTGAT
                      ____________________________________________________________
consensus             CAAAGGAGGATTCTCTTACAGTGGTCAGAGGTGCACTGCGGTTAAGGTTGTCTTGGTGAT
 
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rJMSF040A08+          GGAATCCGTTGCTGATACTCTCGTCGAGAAGGTGAAGGCGAAAGTGGCGAAACTAACGGT
rJMFF033J20+                                 TCGAGAAGGTGAAGGCGAAAGTGGCGAAACTAACGGT
rJMFF007B13+                                 TCGAGAAGGTGAAGGCGAAAGTGGCGAAACTAACGGT
rJMFF003A17+          GGAATCCGTTGCTGATACTCTCGTCGAGAAGGTGAAGGCGAAAGTGGCGAAACTAACGGT
                      ____________________________________________________________
consensus             GGAATCCGTTGCTGATACTCTCGTCGAGAAGGTGAAGGCGAAAGTGGCGAAACTAACGGT
 
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rJMSF040A08+          TGGGGCA-CCCGAGGATGACTGTGACATCACTCCCGTCGTTTCAGAATCATCAGCGAACT
rJMFF033J20+          TGGGGCA-CCCGAGGATGACTGTGACATCACTCCCGTCGTTTCAGAATCATCAGCGAACT
rJMFF007B13+          TGGGGCACCCCGAGGATGACTGTGACATCACTCCCGTCGTTTCAGAATCATCAGCGAACT
rJMFF003A17+          TGGGGCA-CCCGAGGATGACTGTGACATCACTCCCGTCGTTTCAGAATCATCAGCGAACT
                      ____________________________________________________________
consensus             TGGGGCA-CCCGAGGATGACTGTGACATCACTCCCGTCGTTTCAGAATCATCAGCGAACT
 
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rJMSF040A08+          TCATCGAGGGGTTGGTCACAGATGCAAAAGAAAAAGGAGCCACTTTCTGCCAACCATACA
rJMFF033J20+          TCATCGAGGGGTTGGTCACAGATGCAAAAGAAAAAGGAGCCACTTTCTGCCAACCATACA
rJMFF007B13+          TCATCGAGGGGTTGGTCACAGATGCAAAAGAAAAAGGAGCCACTTTCTGCCAACCATACA
rJMFF003A17+          TCATCGAGGGGTTGGTCACAGATGCAAAAGAAAAAGGAGCCACTTTCTGCCAACCATACA
JMFN010G17-                             CAGATGCAAAAGAAAAAGGAGCCACTTTCTGCCAACCATACA
                      ____________________________________________________________
consensus             TCATCGAGGGGTTGGTCACAGATGCAAAAGAAAAAGGAGCCACTTTCTGCCAACCATACA
 
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rJMSF040A08+          AGAGGGAGGGCAACCTCATCTGGCCCTTGTTGCTAGACCATGTGAGGCCCGACATGAGGA
rJMFF033J20+          AGAGGGAGGGCAACCTCATCTGGCCCTTGTTGCTAGACCATGTGAGGCCCGACATGAGGA
rJMFF007B13+          AGAGGGAGGGCAACCTCATCTGGCCCTTGTTGCTAGACCATGTGAGGCCCGACATGAGGA
rJMFF003A17+          AGAGGGAGGGCAACCTCATCTGGCCCTTGTTGCTAGACCATGTGAGGCCCGACATGAGGA
JMFN010G17-           AGAGGGAGGGCAACCTCATCTGGCCCTTGTTGCTAGACCATGTGAGGCCCGACATGAGGA
                      ____________________________________________________________
consensus             AGAGGGAGGGCAACCTCATCTGGCCCTTGTTGCTAGACCATGTGAGGCCCGACATGAGGA
 
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rJMSF040A08+          TCGCGTGGGAGGAGCCATTCGGGCCAGTTTTGCCCGTTATCAGGATCAATTCTGTCGAAG
rJMFF033J20+          TCGCGTGGGAGGAGCCATTCGGGCCAGTTTTGCCCGTTATCAGGATCAATTCTGTCGAAG
rJMFF007B13+          TCGCGTGGGAGGAGCCATTCGGGCCAGTTTTGCCCGTTATCAGGATCAATTCTGTCGAAG
rJMFF003A17+          TCGCGTGGGAGGAGCCATTCGGGCCAGTTTTGCCCGTTATCAGGATCAATTCTGTCGAAG
JMFN010G17-           TCGCGTGGGAGGAGCCATTCGGGCCAGTTTTGCCCGTTATCAGGATCAATTCTGTCGAAG
                      ____________________________________________________________
consensus             TCGCGTGGGAGGAGCCATTCGGGCCAGTTTTGCCCGTTATCAGGATCAATTCTGTCGAAG
 
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rJMSF040A08+          AAGGAATCCACCATTGCAACGCTAGCAATTTCGGCCTCCAAGGATGTGTCTTCACGAAAG
rJMFF033J20+          AAGGAATCCACCATTGCAACGCTAGCAATTTCGGCCTCCAAGGATGTGTCTTCACGAAAG
rJMFF007B13+          AAGGAATCCACCATTGCAACGCTAGCAATTTCGGCCTCCAAGGATGTGTCTTCACGAAAG
rJMFF003A17+          AAGGAATCCACCATTGCAACGCTAGCAATTTCGGCCTCCAAGGATGTGTCTTCACGAAAG
JMFN010G17-           AAGGAATCCACCATTGCAACGCTAGCAATTTCGGCCTCCAAGGATGTGTCTTCACGAAAG
                      ____________________________________________________________
consensus             AAGGAATCCACCATTGCAACGCTAGCAATTTCGGCCTCCAAGGATGTGTCTTCACGAAAG
 
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rJMSF040A08+          ACATCAACAAAGCCATACTGATCAGCGACGCCATGGAGACTGGAACCGTGCAGATAAACT
rJMFF033J20+          ACATCAACAAAGCCATACTGATCAGCGACGCCATGGAGACTGGAACCGTGCAGATAAACT
rJMFF007B13+          ACATCAACAAAGCCATACTGATCAGCGACGCCATGGAGACTGGAACCGTGCAGATAAACT
rJMFF003A17+          ACATCAACAAAGCCATACTGATCAGCGACGCCATGGAGACTGGAACCGTGCAGATAAACT
JMFN010G17-           ACATCAACAAAGCCATACTGATCAGCGACGCCATGGAGACTGGAACCGTGCAGATAAACT
                      ____________________________________________________________
consensus             ACATCAACAAAGCCATACTGATCAGCGACGCCATGGAGACTGGAACCGTGCAGATAAACT
 
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rJMSF040A08+          CAGCACCAGCACGAGGACCCGATCATTTTCCTTTCCAGGGCATCAAGGACAGTGGAATTG
rJMFF033J20+          CAGCACCAGCACGAGGACCCGATCATTTTCCTTTCCAGGGCATCAAGGACAGTGGAATTG
rJMFF007B13+          CAGCACCAGCACGAGGACCCGATCATTTTCCTTTCCAGGGCATCAAGGACAGTGGAATTG
rJMFF003A17+          CAGCACCAGCACGAGGACCCGATCATTTTCCTTTCCAGGGCATCAAGGACAGTGGAATTG
JMFN010G17-           CAGCACCAGCACGAGGACCCGATCATTTTCCTTTCCAGGGCATCAAGGACAGTGGAATTG
                      ____________________________________________________________
consensus             CAGCACCAGCACGAGGACCCGATCATTTTCCTTTCCAGGGCATCAAGGACAGTGGAATTG
 
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rJMSF040A08+          GATCACAGGGCATTACAAACAGCATTAACATGATGACCAAAGTCAAGACTACTGTCATCA
rJMFF033J20+          GATCACAGGGCATTACAAACAGCATTAACATGATGACCAAAGTCAAGACTACTGTCATCA
rJMFF007B13+          GATCACAGGGCATTACAAACAGCATTAACATGATGACCAAAGTCAAGACTACTGTCATCA
rJMFF003A17+          GATCACAGGGCATTACAAACAGCATTAACATGATGACCAAAGTCAAGACTACTGTCATCA
JMFN010G17-           GATCACAGGGCATTACAAACAGCATTAACATGATGACCAAAGTCAAGACTACTGTCATCA
                      ____________________________________________________________
consensus             GATCACAGGGCATTACAAACAGCATTAACATGATGACCAAAGTCAAGACTACTGTCATCA
 
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rJMSF040A08+          ACCTGCCAACCCCATCTTATACTATGGGCTAACATTATGCAGTTAGCATCATGGCAATAA
rJMFF033J20+          ACCTGCCAACCCCATCTTATACTATGGGCTAACATTATGCAGTTAGCATCATGGCAATAA
rJMFF007B13+          ACCTGCCAACCCCATCTTATACTATGGGCTAACATTATGCAGTTAGCATCATGGCAATAA
rJMFF003A17+          ACCTGCCAACCCCATCTTATACTATGGGCTAACATTATGCAGTTAGCATCATGGCAATAA
JMFN010G17-           ACCTGCCAACCCCATCTTATACTATGGGCTAACATTATGCAGTTAGCATCATGGCAATAA
                      ____________________________________________________________
consensus             ACCTGCCAACCCCATCTTATACTATGGGCTAACATTATGCAGTTAGCATCATGGCAATAA
 
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rJMSF040A08+          AAGTAGCTAATAATCTGTTCTGCATTTTAGATCAAGAAACAATTTGTTTTCCCTG     
rJMFF033J20+          AAGTAGCTAATAATCTGTTCTGCATTTTAGATCAAGAAACAATTTGTTTTCCCTGATTTT
rJMFF007B13+          AAGTAGCTAATAATCTGTTCTGCATTTTAGATCAAGAAACAATTTGTTTTCCCTGATTTT
rJMFF003A17+          AAGTAGCTAATAATCTGTTCTGCATTTTAGATCAAGAAACAATTTGTTTTCCCTGATTTT
JMFN010G17-           AAGTAGCTAATAATCTGTTCTGCATTTTAGATCAAGAAACAATTTGTTTTCCCTGATTTT
                      ____________________________________________________________
consensus             AAGTAGCTAATAATCTGTTCTGCATTTTAGATCAAGAAACAATTTGTTTTCCCTGATTTT
 
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rJMFF033J20+          TCACCACTTTGAACCTATAATATTGCAGTG                              
rJMFF007B13+          TCACCACTTTGAACCTATAATATTGCAGTG                              
rJMFF003A17+          TCACCACTTTGAACCTATAATATTGCAGTGT                             
JMFN010G17-           TCACCACTTTGAACCTATAATATTGCAGTGTTGGAATGAGAATAAGTTAGGGTGTTCACT
                      ____________________________________________________________
consensus             TCACCACTTTGAACCTATAATATTGCAGTGTTGGAATGAGAATAAGTTAGGGTGTTCACT