Contig 006132:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN010F17Sequence626006132 (2)ref|XP_009778954.1|1e-79PREDICTED: E3 ubiquitin-protein ligase RHA2A [Nicotiana sylvestris]
JMFN015B09Sequence620006132 (2)ref|XP_009778954.1|6e-80PREDICTED: E3 ubiquitin-protein ligase RHA2A [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN015B09+ AAAAAGGTAAATAATTCCCTGAAAAAAGGAAATAAAATTTAAACAAA
                      ____________________________________________________________
consensus AAAAAGGTAAATAATTCCCTGAAAAAAGGAAATAAAATTTAAACAAA
 
. : . : . : . : . : . :
JMFN015B09+ AAAAAAAAAAAAAGTTCAGAAGTCATAAACGCATCATCAAGATATCAACAACTACTGCAA
JMFN010F17+ CATCAAGATATCAACAACTACTGCAA
                      ____________________________________________________________
consensus AAAAAAAAAAAAAGTTCAGAAGTCATAAACGCATCATCAAGATATCAACAACTACTGCAA
 
. : . : . : . : . : . :
JMFN015B09+ TCATAGCCGCACATCATCGCAAGGAGAACCAGGCCAACACGTCTCCGGCAACGCGCTGGC
JMFN010F17+ TCATAGCCGCACATCATCGCAAGGAGAACCAGGCCAACACGTCTCCGGCAACGCGCTGGC
                      ____________________________________________________________
consensus TCATAGCCGCACATCATCGCAAGGAGAACCAGGCCAACACGTCTCCGGCAACGCGCTGGC
 
. : . : . : . : . : . :
JMFN015B09+ GCGTGAGGGAGACGCTCTCATCGGAGACGAGCGGAGACCGGCAGAGAGGGCAATTGAACT
JMFN010F17+ GCGTGAGGGAGACGCTCTCATCGGAGACGAGCGGAGACCGGCAGAGAGGGCAATTGAACT
                      ____________________________________________________________
consensus GCGTGAGGGAGACGCTCTCATCGGAGACGAGCGGAGACCGGCAGAGAGGGCAATTGAACT
 
. : . : . : . : . : . :
JMFN015B09+ TGAGCTGGTCAAGCCAGCCATCGAAGCACTCCTTATGGAAGACGTGCCTGCAGTCCAGCT
JMFN010F17+ TGAGCTGGTCAAGCCAGCCATCGAAGCACTCCTTATGGAAGACGTGCCTGCAGTCCAGCT
                      ____________________________________________________________
consensus TGAGCTGGTCAAGCCAGCCATCGAAGCACTCCTTATGGAAGACGTGCCTGCAGTCCAGCT
 
. : . : . : . : . : . :
JMFN015B09+ TCCGGACGTGGTCGCCGTCGCCGAGGCGGTCGAGGCAAACGACGCAGTTAGGACCGGCTC
JMFN010F17+ TCCGGACGTGGTCGCCGTCGCCGAGGCGGTCGAGGCAAACGACGCAGTTAGGACCGGCTC
                      ____________________________________________________________
consensus TCCGGACGTGGTCGCCGTCGCCGAGGCGGTCGAGGCAAACGACGCAGTTAGGACCGGCTC
 
. : . : . : . : . : . :
JMFN015B09+ CCTGCAACCGGTACGAGAAGATCCGGTTCAAATTCAACTGCTCGGCGAGGACAATGACTC
JMFN010F17+ CCTGCAACCGGTACGAGAAGATCCGGTTCAAATTCAACTGCTCGGCGAGGACAATGACTC
                      ____________________________________________________________
consensus CCTGCAACCGGTACGAGAAGATCCGGTTCAAATTCAACTGCTCGGCGAGGACAATGACTC
 
. : . : . : . : . : . :
JMFN015B09+ CGGCCAAGCCGGAACCGACCGCGTCGTAGAGCGTGTCGTCGATGCGGTCGGGGTCGAACC
JMFN010F17+ CGGCCAAGCCGGAACCGACCGCGTCGTAGAGCGTGTCGTCGATGCGGTCGGGGTCGAACC
                      ____________________________________________________________
consensus CGGCCAAGCCGGAACCGACCGCGTCGTAGAGCGTGTCGTCGATGCGGTCGGGGTCGAACC
 
. : . : . : . : . : . :
JMFN015B09+ GCGACGCGAGGCCGACGAGGCGGAGGAGAGCGAAGACGAGGGAGCGGAGGTAGGCGACGG
JMFN010F17+ GCGACGCGAGGCCGACGAGGCGGAGGAGAGCGAAGACGAGGGAGCGGAGGTAGGCGACGG
                      ____________________________________________________________
consensus GCGACGCGAGGCCGACGAGGCGGAGGAGAGCGAAGACGAGGGAGCGGAGGTAGGCGACGG
 
. : . : . : . : . : . :
JMFN015B09+ CGTTGGCGAGGAAGACCACCATGAGAATCGGAATCGACTCGGTGGAAACGTCGGTGAGTT
JMFN010F17+ CGTTGGCGAGGAAGACCACCATGAGAATCGGAATCGACTCGGTGGAAACGTCGGTGAGTT
                      ____________________________________________________________
consensus CGTTGGCGAGGAAGACCACCATGAGAATCGGAATCGACTCGGTGGAAACGTCGGTGAGTT
 
. : . : . : . : . : . :
JMFN015B09+ GGTTCTGTAAACCCATCTTCTTCTTCTTCTTCT
JMFN010F17+ GGTTCTGTAAACCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCC
                      ____________________________________________________________
consensus GGTTCTGTAAACCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCC
 
. : . : . : . : . : . :
JMFN010F17+ TGTGATTTGGGGATTTTTGATTTTGAACGAAAATGGTTTTTATTGGAGGAGATGAGAGAA
                      ____________________________________________________________
consensus TGTGATTTGGGGATTTTTGATTTTGAACGAAAATGGTTTTTATTGGAGGAGATGAGAGAA