Contig 006130:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009G14Sequence627006130 (2)gb|EAY99035.1|2e-59hypothetical protein OsI_20993 [Oryza sativa Indica Group]
JMFN035H04Sequence220006130 (2)ref|XP_010916042.1|8e-19PREDICTED: ras-related protein RABA1f-like [Elaeis guineensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN009G14+ AACAAATGAAACGCTATGCTCAGAGCA
                      ____________________________________________________________
consensus AACAAATGAAACGCTATGCTCAGAGCA
 
. : . : . : . : . : . :
JMFN009G14+ AAACATGAGCACGCCAGATCAGAAAAAAGGAAGGATAAGAGACTATGCAGTTAGTTGAGG
                      ____________________________________________________________
consensus AAACATGAGCACGCCAGATCAGAAAAAAGGAAGGATAAGAGACTATGCAGTTAGTTGAGG
 
. : . : . : . : . : . :
JMFN009G14+ CTAAATTTGAGAAGGGCAGAAGGCGATGACACCATCCTTCCCTCCAACGTTTATGGTTTC
                      ____________________________________________________________
consensus CTAAATTTGAGAAGGGCAGAAGGCGATGACACCATCCTTCCCTCCAACGTTTATGGTTTC
 
. : . : . : . : . : . :
JMFN035H04+ AGGCGAT
JMFN009G14+ CCCCTTTGGCATGGCCGATAGATGATGATGTATCTGCGTGAGTACTTGCGTAAAGGCGAT
                      ____________________________________________________________
consensus CCCCTTTGGCATGGCCGATAGATGATGATGTATCTGCGTGAGTACTTGCGTAAAGGCGAT
 
. : . : . : . : . : . :
JMFN035H04+ CTCAACATTCAATGACTGGAGAGCTGATGTCTCCATAAAGAAGGTTCCCTCCTTCTTAGC
JMFN009G14+ CTCAACATTCAATGACTGGAGAGCTGATGTCTCCATAAAGAAGGTGCCCTCCTTCTTAGC
                      ____________________________________________________________
consensus CTCAACATTCAATGACTGGAGAGCTGATGTCTCCATAAAGAAGGTTCCCTCCTTCTTAGC
 
. : . : . : . : . : . :
JMFN035H04+ AAAGGCCTTGGCTTCCTCGATAGAAACA
JMFN009G14+ AAAGGCCTTTGCATCCTCGGTAGAAACAGCACGCGAGTGATGTAAGTCTGCCTTGTTTCC
                      ____________________________________________________________
consensus AAAGGCCTTTGCTTCCTCGGTAGAAACAGCACGCGAGTGATGTAAGTCTGCCTTGTTTCC
 
. : . : . : . : . : . :
JMFN009G14+ CACCAGCATTACGACCACATTTTGATCTGTGTGATCCCGTAGCTCTTTTAACCACCTCTC
                      ____________________________________________________________
consensus CACCAGCATTACGACCACATTTTGATCTGTGTGATCCCGTAGCTCTTTTAACCACCTCTC
 
. : . : . : . : . : . :
JMFN009G14+ TACATTTTTAAATGTCACATGGCTGGTAACATCATATACAACCAATGCACCAACAGCTCC
                      ____________________________________________________________
consensus TACATTTTTAAATGTCACATGGCTGGTAACATCATATACAACCAATGCACCAACAGCTCC
 
. : . : . : . : . : . :
JMFN009G14+ TTCACAGTATGCATTTGTGAGGCTTCGGTATCTTCAACACACAACAAAAGGGGAAACAAC
                      ____________________________________________________________
consensus TTCACAGTATGCATTTGTGAGGCTTCGGTATCTTCAACACACAACAAAAGGGGAAACAAC
 
. : . : . : . : . : . :
JMFN009G14+ AAGCAATCCAATCGCCATTTACACTATATATATATCTCATTATCATACAAATATAAGGTA
                      ____________________________________________________________
consensus AAGCAATCCAATCGCCATTTACACTATATATATATCTCATTATCATACAAATATAAGGTA
 
. : . : . : . : . : . :
JMFN009G14+ TTTCAAATTCTAAATCATTCCTATTCCTATAATAATCAATTGAAGTCATAGCACTTTCCC
                      ____________________________________________________________
consensus TTTCAAATTCTAAATCATTCCTATTCCTATAATAATCAATTGAAGTCATAGCACTTTCCC