Contig 006128:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008I20Sequence568006128 (2)ref|XP_011080263.1|1e-52PREDICTED: protein slowmo homolog 2-like [Sesamum indicum]
JMSF019C13Sequence391019972819006128 (2)ref|XP_006365819.1|2e-117PREDICTED: protein slowmo homolog [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+                                            ACTGCTCGTTACAATATACTTGTATT
                      ____________________________________________________________
consensus                                               ACTGCTCGTTACAATATACTTGTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          TAAGATCTCACTAAGGAAATAATGTGTGGAGTGTTTGTTGCTTCTAGATAGAGAACAAAC
                      ____________________________________________________________
consensus             TAAGATCTCACTAAGGAAATAATGTGTGGAGTGTTTGTTGCTTCTAGATAGAGAACAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          AGTATGGTCAGAGCGTATTCACAAGAGCACACTTATAAGCATCCATGGGAGCGAGTGACT
                      ____________________________________________________________
consensus             AGTATGGTCAGAGCGTATTCACAAGAGCACACTTATAAGCATCCATGGGAGCGAGTGACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          ACTGCATCGTGGCGAAAGTTTGCTGATCCTGAAAACAAACGCGTTCTATCACACATCCGT
                      ____________________________________________________________
consensus             ACTGCATCGTGGCGAAAGTTTGCTGATCCTGAAAACAAACGCGTTCTATCACACATCCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          GCGGTTGACACTTTGAACCACAAGCTTGACTCCAGTTCAGGGAAGCTTTACACTACTCGT
                      ____________________________________________________________
consensus             GCGGTTGACACTTTGAACCACAAGCTTGACTCCAGTTCAGGGAAGCTTTACACTACTCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          GCTGTCACCATCCATGCTCCAGGACCATGGTTCATTTCCAAAATCACCGGTCAGGACTCC
                      ____________________________________________________________
consensus             GCTGTCACCATCCATGCTCCAGGACCATGGTTCATTTCCAAAATCACCGGTCAGGACTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          TGCCATTGTGTTGAATCAACTGTTGTGGATGCCCAATCTCGCTCAATGCAGATATCCACT
JMFN008I20-                                           CCAATCTCGCTCAATGCAGATATCCACT
                      ____________________________________________________________
consensus             TGCCATTGTGTTGAATCAACTGTTGTGGATGCCCAATCTCGCTCAATGCAGATATCCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          CGTAACATCAGTCTTGAGAAGTTCATTGAAGTGGAAGAGAAGATCCGATACGATCCTCAT
JMFN008I20-           CGTAACATCAGTCTTGAGAAGTTCATTGAAGTGGAAGAGAAGATCCGATACGATCCTCAT
                      ____________________________________________________________
consensus             CGTAACATCAGTCTTGAGAAGTTCATTGAAGTGGAAGAGAAGATCCGATACGATCCTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          CCAGAGAATCCTAATGGATGGACAATTTGTAGGCAGGAAACTAGTATTAGGATAAAGCCC
JMFN008I20-           CCAGAGAATCCTAATGGATGGACAATTTGTAGGCAGGAAACTAGTATTAGGATAAAGCCC
                      ____________________________________________________________
consensus             CCAGAGAATCCTAATGGATGGACAATTTGTAGGCAGGAAACTAGTATTAGGATAAAGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          CTGTCAGCGTTGGCATCAATGGCGGAGAAGATAGAGCAGAAATGTGCTGATAGGTTCCAG
JMFN008I20-           CTGTCAGCGTTGGCATCAATGGCGGAGAAGATAGAGCAGAAATGTGCTGATAGGTTCCAG
                      ____________________________________________________________
consensus             CTGTCAGCGTTGGCATCAATGGCGGAGAAGATAGAGCAGAAATGTGCTGATAGGTTCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          CAAAACAGTGCTAAAGGCAGGGAAGTGATGGAAAGGATGTGCAAGTATCTTGAGACTGAA
JMFN008I20-           CAAAACAGTGCTAAAGGCAGGGAAGTGATGGAAAGGATGTGCAAGTATCTTGAGACTGAA
                      ____________________________________________________________
consensus             CAAAACAGTGCTAAAGGCAGGGAAGTGATGGAAAGGATGTGCAAGTATCTTGAGACTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          TCAGGTGGCATTTCAATGTGATCTGTTTGCTTAACTTTGAATGAACTTCTTCAATGCTAA
JMFN008I20-           TCAGGTGGCATTTCAATGTGATCTGTTTGCTTAACTTTGAATGAACTTCTTCAATGCTAA
                      ____________________________________________________________
consensus             TCAGGTGGCATTTCAATGTGATCTGTTTGCTTAACTTTGAATGAACTTCTTCAATGCTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          TTCTTAGGGGCTCCGACCTGTTGGAGGTGAGTTTTTGTTTTTGTGAAACAAAAAGAGAGT
JMFN008I20-           TTCTTAGGGGCTCCGACCTGTTGGAGGTGAGTTTTTGTTTTTGTGAAACAAAAAGAGAGT
                      ____________________________________________________________
consensus             TTCTTAGGGGCTCCGACCTGTTGGAGGTGAGTTTTTGTTTTTGTGAAACAAAAAGAGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019C13+          AGGCTCTTCCTTTAGCTTTGTAGAACTGGATGTAAAATCATAGTTCATGCAGGGGCAGTC
JMFN008I20-           AGGCTCTTCCTTTAGCTTTGTAGAACTGGATGTAAAATCATAGTTCATGCAGGGGCAGTC
                      ____________________________________________________________
consensus             AGGCTCTTCCTTTAGCTTTGTAGAACTGGATGTAAAATCATAGTTCATGCAGGGGCAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN008I20-           ATGTGATGCAGATAGCCAAATGCATCTCTGTGGAATAATAATGACTTTCAGAGATGAGAG
                      ____________________________________________________________
consensus             ATGTGATGCAGATAGCCAAATGCATCTCTGTGGAATAATAATGACTTTCAGAGATGAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN008I20-           TGTTGTATCCATTGATTTCTCTTTTCATTTTGTTGCTCAAGACTCCCTTCCATTTTCAGT
                      ____________________________________________________________
consensus             TGTTGTATCCATTGATTTCTCTTTTCATTTTGTTGCTCAAGACTCCCTTCCATTTTCAGT