| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF045I03 | Sequence | 424 | 006124 (7) | ref|XP_006361792.1| | 5e-62 | PREDICTED: dolichyldiphosphatase 1-like [Solanum tuberosum] | 420 | 006124 (7) | emb|CDP06715.1| | 6e-17 | unnamed protein product [Coffea canephora] |
| JMFN006M11 | Sequence | 611 | 006124 (7) | ref|XP_006361792.1| | 1e-80 | PREDICTED: dolichyldiphosphatase 1-like [Solanum tuberosum] | |||||
| JMSF046I03 | Sequence | 673 | 006124 (7) | ref|XP_006361792.1| | 6e-107 | PREDICTED: dolichyldiphosphatase 1-like [Solanum tuberosum] | 732 | 006124 (7) | ref|XP_006361792.1| | 4e-80 | PREDICTED: dolichyldiphosphatase 1-like [Solanum tuberosum] |
| JMSF051I24 | Sequence | 357 | 006124 (7) | ref|XP_004246678.1| | 7e-40 | PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Solanum lycopersic | 708 | 006124 (7) | ref|XP_006361792.1| | 2e-78 | PREDICTED: dolichyldiphosphatase 1-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMFF045I03- AAAAAAATATTTGAATTATGTAAACTTATTAAAGGATTAGTTCCTC
rJMSF051I24- TC
rJMSF046I03- AAGGATTAGTTCATC
____________________________________________________________
consensus AAAAAAATATTTGAATTATGTAAACTTATTAAAGGATTAGTTCCTC
. : . : . : . : . : . :
rJMFF045I03- TGAAAAGTTCTATTTTAAAACAGGCTTACAAAATAAAATGTTTGGCCATACTATGGAAAA
rJMSF051I24- TGAGAAGTTCTATTTTAAGACAGGCTTACAAGATAAAATGTTTGGCCATACTATGGAAAA
rJMSF046I03- TGAGAAGTTCTATTTTAAGACAGGCTTACAAGATAAAATGTTTGGCCATACTATGGAAAA
____________________________________________________________
consensus TGAGAAGTTCTATTTTAAGACAGGCTTACAAGATAAAATGTTTGGCCATACTATGGAAAA
. : . : . : . : . : . :
rJMFF045I03- ACTGTAAAAACCTATGAATCAAACGAGCAATAAAATATAGTGTGTAAAAAGGGGTCAAAA
rJMSF051I24- ACTGTANAAACCTATGAATCAAACGAGCAATAGAATATAGTGTGTAAAAAGGTGTCAAAA
rJMSF046I03- ACTGTAAAAACCTATGAATCAAACGAGCAATAGAATATAGTGTGTAAAAAGGTGTCAAAA
____________________________________________________________
consensus ACTGTAAAAACCTATGAATCAAACGAGCAATAGAATATAGTGTGTAAAAAGGTGTCAAAA
. : . : . : . : . : . :
rJMFF045I03- CACATTTTATCTTTCCTCTTCTTGGGCCAACAATGGATCCTTTAAACGGTACCAAGCACC
rJMSF051I24- CACATTTTATCTTTCCTCTTCTTGTGCCAGCAATGGATCCTTTAAACGGTACCAAGCACC
rJMSF046I03- CACATTTTATCTTTCCTCTTCTTGTGCCAGCAATGGATCCTTTAAACGGTACCAAGCACC
____________________________________________________________
consensus CACATTTTATCTTTCCTCTTCTTGTGCCAGCAATGGATCCTTTAAACGGTACCAAGCACC
. : . : . : . : . : . :
rJMFF045I03- TTCAGAGTCCAAATGAAGCGATTAAAACTGATCATCACGTATCAATCCACACGCTTGTAA
rJMSF051I24- TTCAGAGTCCAGATGAAGCGATTAGAACTGATCATCACGTATCAATCCACACGCTTGTAA
rJMSF046I03- TTCAGAGTCCAGATGAAGCGATTAGAACTGATCATCACGTATCAATCCACACGCTTGTAA
____________________________________________________________
consensus TTCAGAGTCCAGATGAAGCGATTAGAACTGATCATCACGTATCAATCCACACGCTTGTAA
. : . : . : . : . : . :
rJMFF045I03- AACACATGTTTCCTAACAGCCCTAACATTTTCGTATTCGAATTTCAATACATTGGGGATA
rJMSF051I24- GACACATGTTTCCTAGCAGCCCTAGCATTTTCGTATTCGAATTTCAATACATTGGGGATA
rJMSF046I03- GACACATGTTTCCTAGCAGCCCTAGCATTTTCGTATTCGAATTTCAATACATTGGGGATA
____________________________________________________________
consensus GACACATGTTTCCTAGCAGCCCTAGCATTTTCGTATTCGAATTTCAATACATTGGGGATA
. : . : . : . : . : . :
rJMFF045I03- TCCGAAGTGTCCTTAATGTAAAAAAACCTCCCAAAAGCCCTCTCCTCAATAACCGTAAAA
rJMSF051I24- TCCGAAGTGTCCTTAATGTAAAAGAACCTCCCAAAAGCGCTCTCCTCAATAGCCGTAAAA
rJMSF046I03- TCCGAAGTGTCCTTAATGTAAAAGAACCTCCCAAAAGCGCTCTCCTCAATAGCCGTAAAA
JMSF046I03+ CGAAGTGTCCTTAATGTAAAAGAACCTCCCAAAAGCGCTCTCCTCAATAGCCGTAAAA
____________________________________________________________
consensus TCCGAAGTGTCCTTAATGTAAAAGAACCTCCCAAAAGCGCTCTCCTCAATAGCCGTAAAA
. : . : . : . : . : . :
rJMFF045I03- TAACGTCTGATTAT
rJMSF051I24- TAACGTCTGATTATAGAATTAACCACCCAGAACCAGGCGGCGCCGAGGAAAGCGCCGAGC
rJMSF046I03- TAACGTCTGATTATAGAATTAACCACCCAGAACCAGGCGGCGCCGAGGAAAGCGCCGAGC
JMSF046I03+ TAACGTCTGATTATAGAATTAACCACCCAGAACCAGGCGGCGCCGAGGAAAGCGCCGAGC
____________________________________________________________
consensus TAACGTCTGATTATAGAATTAACCACCCAGAACCAGGCGGCGCCGAGGAAAGCGCCGAGC
. : . : . : . : . : . :
rJMSF051I24- GAAGCCCCGGCAAAGACCTGCGCCACCGTGTGATAACCTAGGTAGACCCTCGAGTGGAGA
rJMSF046I03- GAAGCCCCGGCAAAGACCTGCGCCACCGTGTGATAACCTAGGTAGACCCTCGAGTGGAGA
JMSF046I03+ GAAGCCCCGGCAAAGACCTGCGCCACCGTGTGATAACCTAGGTAGACCCTCGAGTGGAGA
JMFN006M11+ TCGAGTGGAGA
____________________________________________________________
consensus GAAGCCCCGGCAAAGACCTGCGCCACCGTGTGATAACCTAGGTAGACCCTCGAGTGGAGA
. : . : . : . : . : . :
rJMSF051I24- GTCAGAATCGCCAACGGCCAGATCAGAAGAACAGCGAACAACATTTGGTACCGGAACAAG
rJMSF046I03- GTCAGAATCGCCAACGGCCAGATCAGAAGAACAGCGAACAACATTTGGTACCGGAACAAG
JMSF046I03+ GTCAGAATCGCCAACGGCCAGATCAGAAGAACAGCGAACAACATTTGGTACCGGAACAAG
JMFN006M11+ GTCAGAATCGCCAACGGCCAGATCAGAAGAACAGCGAACAACATTTGGTACCGGAACAAG
____________________________________________________________
consensus GTCAGAATCGCCAACGGCCAGATCAGAAGAACAGCGAACAACATTTGGTACCGGAACAAG
. : . : . : . : . : . :
rJMSF051I24- GATCCCAGTCTCCGGCGGGTGAGTAGCGTGAAGTAGACGGCGAAGAAGAACATGTATTGG
rJMSF046I03- GATCCCAGTCTCCGGTGGGTGAGTAGCGTGAAGTAGACGGCGAAGAAGAACATGTATTGG
JMSF046I03+ GATCCCAGTCTCCGGTGGGTGAGTAGCGTGAAGTAGACGGCGAAGAAGAACATGTATTGG
JMFF045I03+ GGTGGGTGAGTAGCGGGAAGTAGTCGCGGAAGAAGAACATGTATTGG
JMFN006M11+ GATCCCAGTCTCCGGTGGGTGAGTAGCGTGAAGTAGACGGCGAAGAAGAACATGTATTGG
____________________________________________________________
consensus GATCCCAGTCTCCGGTGGGTGAGTAGCGTGAAGTAGACGGCGAAGAAGAACATGTATTGG
. : . : . : . : . : . :
rJMSF051I24- GCGTGGCTGGAGGGCCAGCCATGCGAATCGCACATCTCTAGGATCACGCAGGTCTCGGGG
rJMSF046I03- GCGTGGCTGGAGGGCCAGCCATGCGAATCGCACATCTCTAGGATCACGCAGGTCTCGGGG
JMSF046I03+ GCGTGGCTGGAGGGCCAGCCATGCGAATCGCACATCTCTAGGATCACGCAGGTCTCGGGG
JMFF045I03+ GCGTGGTTGGAGGGCCAGCCATGCGAATCGCACATCTCTAGGATCACGCAGGTCTCGGGG
JMSF051I24+ CCATGCGAATCGCACATCTNTNGGNTCACGCAGGTCTCGGGG
JMFN006M11+ GCGTGGCTGGAGGGCCAGCCATGCGAATCGCACATCTCTAGGATCACGCAGGTCTCGGGG
____________________________________________________________
consensus GCGTGGCTGGAGGGCCAGCCATGCGAATCGCACATCTCTAGGATCACGCAGGTCTCGGGG
. : . : . : . : . : . :
rJMSF051I24- CGGGCCTGCTGGACCGACGTCTTGATGACCTCATTGATTATCTGGG
rJMSF046I03- CGGGCCTGCTGGACCGACGTCTTGATGACCTCATTGATTATCTGGGAAATA
JMSF046I03+ CGGGCCTGCTGGACCGACGTCTTGATGACCTCATTGATTATCTGGGAAATAAGCAGGCCT
JMFF045I03+ CGGGCGTTCTGGACCGACGTCTTGATGACCTCATTGATTATCTGGGAAATAAGCATGCTT
JMSF051I24+ CGGNCCTGCTGGACCGNCGTCTTGATGACNTCATTGATTNTNTGGGAAATAAGCAGTCNT
JMFN006M11+ CGGGCCTGCTGGACCGACGTCTTGATGACCTCATTGATTATCTGGGAAATAAGCAGGCCT
____________________________________________________________
consensus CGGGCCTGCTGGACCGACGTCTTGATGACCTCATTGATTATCTGGGAAATAAGCAGGCCT
. : . : . : . : . : . :
JMSF046I03+ AAGGCGAAGAACATGCCCTGGAGCTCGCGGCGGAACATGAAGTGGGAGATGAAGCCGCCG
JMFF045I03+ AAGGCGAAGAACATGCCTTGGAGCTCGCGGCGGAACATGAAGTGGGAGATGAAGCCCCCG
JMSF051I24+ AAGNCGAAGAACATGCCCTGGAGCTCGCGGCGGAACATGAANTGGGAGATGAAGCCGCCG
JMFN006M11+ AAGGCGAAGAACATGCCCTGGAGCTCGCGGCGGAACATGAAGTGGGAGATGAAGCCGCCG
____________________________________________________________
consensus AAGGCGAAGAACATGCCCTGGAGCTCGCGGCGGAACATGAAGTGGGAGATGAAGCCGCCG
. : . : . : . : . : . :
JMSF046I03+ AAGGTGATGAAGACGGGCACCAGCGACACCCAGGCCAGGAAATGCCCCAGCTGATCGCCC
JMFF045I03+ AAGGTGATGAAGACGGGCACCAGCGACACCCAGGGCAGGAAATGCCCCAGCTGATCGCCC
JMSF051I24+ AAGGTGATGAAGACGGGCACCAGCNACACCCANGCCAGGAAATGCCCCAGCTGATCGCCC
JMFN006M11+ AAGGTGATGAAGACGGGCACCAGCGACACCCAGGCCAGGAAATGCCCCAGCTGATCGCCC
____________________________________________________________
consensus AAGGTGATGAAGACGGGCACCAGCGACACCCAGGCCAGGAAATGCCCCAGCTGATCGCCC
. : . : . : . : . : . :
JMSF046I03+ TTCCGGTACCGGACGTGCGTGAGAGTCACGGCCTTCAGCGGAACGTGGGACATGGCGGAT
JMFF045I03+ TTCCGGTACCGGACGTGCGTGAGAGTCACGGCCTTCAGCGGAACGTGGGACATGGCGGAT
JMSF051I24+ TTCCGGTNCCGGACGTGCGTGAGAGTCACGGCNTTCAGCGGAACGTGGGACATGGCGGAT
JMFN006M11+ TTCCGGTACCGGACGTGCGTGAGAGTCACGGCCTTCAGCGGAACGTGGGACATGGCGGAT
____________________________________________________________
consensus TTCCGGTACCGGACGTGCGTGAGAGTCACGGCCTTCAGCGGAACGTGGGACATGGCGGAT
. : . : . : . : . : . :
JMSF046I03+ TGCGCAATGAGATCTGCGATGTGTACAATCACAGCGCCTGAGAGAGAGCAAAGCGAAAGA
JMFF045I03+ TGCGCAATGAGATCTGCGAGGTGTACAATCACAGCGCCTGAGAGAGAGCAAAGCGAAAGA
JMSF051I24+ TGCGCAATGAGATCTGNGATGTGTACAATCACAGCGCNTGAGAGAGANCAAAGCGAAAGA
JMFN006M11+ TGCGCAATGAGATCTGCGATGTGTACAATCACAGCGCCTGAGAGAGAGCAAAGCGAAAGA
____________________________________________________________
consensus TGCGCAATGAGATCTGCGATGTGTACAATCACAGCGCCTGAGAGAGAGCAAAGCGAAAGA
. : . : . : . : . : . :
JMSF046I03+ GAAAACCAGTTGA
JMFF045I03+ GAAAACCTGTTGA
JMSF051I24+ GAAAACCAGTTGA
JMFN006M11+ GAAAACCAGTTGACAGAAGAAAAATGGCTATGGAGGAAAGAGAAGTGTTATATAGTTTAG
____________________________________________________________
consensus GAAAACCAGTTGACAGAAGAAAAATGGCTATGGAGGAAAGAGAAGTGTTATATAGTTTAG
. : . : . : . : . : . :
JMFN006M11+ CAAAAAGATGAATCGCATCTGTTCTCCTCCATTTTTCCCATCTAACACCCGCAGAATTGG
____________________________________________________________
consensus CAAAAAGATGAATCGCATCTGTTCTCCTCCATTTTTCCCATCTAACACCCGCAGAATTGG