Contig 006119:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN003J05Sequence615006119 (3)emb|CDO99525.1|4e-15unnamed protein product [Coffea canephora]
JMFN004H11Sequence597006119 (3)emb|CDO99525.1|3e-15unnamed protein product [Coffea canephora]
JMFN029O22Sequence544006119 (3)emb|CDO99525.1|2e-15unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN003J05+                                      AATAAACTAACAGTTATATATCTGTTGGATACA
                      ____________________________________________________________
consensus                                        AATAAACTAACAGTTATATATCTGTTGGATACA
 
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JMFN029O22+                     GAAAAGCATACATTTCATTCAACAGTTAAGAAAGAAGCATATACATATTG
JMFN003J05+           ATTGAAAAGTGAAAAGCATACATTTCATTCAACAGTTAAGAAAGAAGCATATACATATTG
JMFN004H11+                     GAAAAGCATACATTTCATTCAACAGTTAAGAAAGAAGCATATACATATTG
                      ____________________________________________________________
consensus             ATTGAAAAGTGAAAAGCATACATTTCATTCAACAGTTAAGAAAGAAGCATATACATATTG
 
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JMFN029O22+           GATGAAAGACAGGAATATAATATATATTATATATAATGAAGACATTGGAATTGAAGATGG
JMFN003J05+           GATGAAAGACAGGAATATAATATATATTATATATAATGAAGACATTGGAATTGAAGATGG
JMFN004H11+           GATGAAAGACAGGAATATAATATATATTATATATAATGAAGACATTGGAATTGAAGATGG
                      ____________________________________________________________
consensus             GATGAAAGACAGGAATATAATATATATTATATATAATGAAGACATTGGAATTGAAGATGG
 
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JMFN029O22+           AGATGAGAAATTGGTGTGTGTTCTGGAATTGATATGCTTCTTCTTCTCGCATTGTATATT
JMFN003J05+           AGATGAGAAATTGGTGTGTGTTCTGGAATTGATATGCTTCTTCTTCTCGCATTGTATATT
JMFN004H11+           AGATGAGAAATTGGTGTGTGTTCTGGAATTGATATGCTTCTTCTTCTCGCATTGTATATT
                      ____________________________________________________________
consensus             AGATGAGAAATTGGTGTGTGTTCTGGAATTGATATGCTTCTTCTTCTCGCATTGTATATT
 
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JMFN029O22+           AAATTATATATGCTTCTTGCATGGATGGCAGCGAGAGATGGAGATGATAAAAAGTTTAAC
JMFN003J05+           AAATTATATATGCTTCTTGCATGGATGGCAGCGAGAGATGGAGATGATAAAAAGTTTAAC
JMFN004H11+           AAATTATATATGCTTCTTGCATGGATGGCAGCGAGAGATGGAGATGATAAAAAGTTTAAC
                      ____________________________________________________________
consensus             AAATTATATATGCTTCTTGCATGGATGGCAGCGAGAGATGGAGATGATAAAAAGTTTAAC
 
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JMFN029O22+           GCCCCCGTCCGCCGCATCGGGTGAACCTGCTGCAACCGCGGGTGTAGGGGCGGATGGGGT
JMFN003J05+           GCCCCCGTCCGCCGCATCGGGTGAACCTGCTGCAACCGCGGGTGTAGGGGCGGATGGGGT
JMFN004H11+           GCCCCCGTCCGCCGCATCGGGTGAACCTGCTGCAACCGCGGGTGTAGGGGCGGATGGGGT
                      ____________________________________________________________
consensus             GCCCCCGTCCGCCGCATCGGGTGAACCTGCTGCAACCGCGGGTGTAGGGGCGGATGGGGT
 
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JMFN029O22+           GGTGGGAGTGGCAGAAATAGTAAGAAGGGCCTTTTTTGCCGCAGGGGATCTGGTCCTTCC
JMFN003J05+           GGTGGGAGTGGCAGAAATAGTAAGAAGGGCCTTTTTTGCCGCAGGGGATCTGGTCCTTCC
JMFN004H11+           GGTGGGAGTGGCAGAAATAGTAAGAAGGGCCTTTTTTGCCGCAGGGGATCTGGTCCTTCC
                      ____________________________________________________________
consensus             GGTGGGAGTGGCAGAAATAGTAAGAAGGGCCTTTTTTGCCGCAGGGGATCTGGTCCTTCC
 
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JMFN029O22+           GCAACACCGAGTAGCTCAGGTATCTGGTCCTGAACAGCATTCGTCTTGAGGATTCGGAAT
JMFN003J05+           GCAACACCGAGTAGCTCAGGTATCTGGTCCTGAACAGCATTCGTCTTGAGGATTCGGAAT
JMFN004H11+           GCAACACCGAGTAGCTCAGGTATCTGGTCCTGAACAGCATTCGTCTTGAGGATTCGGAAT
                      ____________________________________________________________
consensus             GCAACACCGAGTAGCTCAGGTATCTGGTCCTGAACAGCATTCGTCTTGAGGATTCGGAAT
 
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JMFN029O22+           CCAGCATCATCTCCTCCGCGTCATCAAAGTCCATTATGCCGCTGCTCGCCGCCCCCACGG
JMFN003J05+           CCAGCATCATCTCCTCCGCGTCATCAAAGTCCATTATGCCGCTGCTCGCCGCCCCCACGG
JMFN004H11+           CCAGCATCATCTCCTCCGCGTCATCAAAGTCCATTATGCCGCTGCTCGCCGCCCCCACGG
                      ____________________________________________________________
consensus             CCAGCATCATCTCCTCCGCGTCATCAAAGTCCATTATGCCGCTGCTCGCCGCCCCCACGG
 
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JMFN029O22+           AGGCGGGATCTGAGTACATAGTGGATTCCACCACCGCGGATAACGCCACATTGGCCACCA
JMFN003J05+           AGGCGGGATCTGAGTACATAGTGGATTCCACCACCGCGGATAACGCCACATTGGCCACCA
JMFN004H11+           AGGCGGGATCTGAGTACATAGTGGATTCCACCACCGCGGATAACGCCACATTGGCCACCA
                      ____________________________________________________________
consensus             AGGCGGGATCTGAGTACATAGTGGATTCCACCACCGCGGATAACGCCACATTGGCCACCA
 
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JMFN029O22+           CCAGGAGGAGGAGG                                              
JMFN003J05+           CCAGGAGGAGGAGGATAGCTAGCTGGGCTACCTTAATTGCCA                  
JMFN004H11+           CCAGGAGGAGGAGGATAGCTAGCTGGGCTACCTTAATTGCCATTTTCTTTTTTTGTCGGT
                      ____________________________________________________________
consensus             CCAGGAGGAGGAGGATAGCTAGCTGGGCTACCTTAATTGCCATTTTCTTTTTTTGTCGGT