clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF002A21 | Sequence | 356 | 006111 (3) | ref|XP_009620720.1| | 2e-24 | PREDICTED: beta-amyrin 28-oxidase-like [Nicotiana tomentosiformis] | 420 | 002740 (6) | ref|XP_006353629.1| | 7e-37 | PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum] |
JMFF020F22 | Sequence | 535 | 006111 (3) | ref|XP_006353629.1| | 2e-63 | PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum] | 677 | 002740 (6) | ref|XP_006353629.1| | 6e-96 | PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum] |
JMFF051P02 | Sequence | 596 | 006111 (3) | ref|XP_006353629.1| | 7e-57 | PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum] | 503 | 002740 (6) | ref|XP_006353629.1| | 4e-49 | PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFF020F22+ A
____________________________________________________________
consensus A
. : . : . : . : . : . :
JMFF020F22+ ATGCTCAAGAACAGCTTGCACGCCAGCGCGAAGGTGTAATATTTGGAGAGAGCATAAACC
____________________________________________________________
consensus ATGCTCAAGAACAGCTTGCACGCCAGCGCGAAGGTGTAATATTTGGAGAGAGCATAAACC
. : . : . : . : . : . :
JMFF020F22+ TTGACTTCTCTGAATGGGGCCCACTCCTCGGCGATATGTTCCTTGGCCATGGAATCCATG
JMFF051P02+ GGGGCCCACTCCTCGGCGATATGTTCCTTGGCCATGGAATCCATG
____________________________________________________________
consensus TTGACTTCTCTGAATGGGGCCCACTCCTCGGCGATATGTTCCTTGGCCATGGAATCCATG
. : . : . : . : . : . :
JMFF020F22+ GTGGGGATGTAGTGTTTGAGATTCTCCAGTTTGAAAATCTCGTGGATGTTGGTCCGGTTG
JMFF051P02+ GTGGGGATGTAGTGTTTGAGATTCTCCAGTTTGAAAATCTCGTGGATGTTGGTCCGGTTG
____________________________________________________________
consensus GTGGGGATGTAGTGTTTGAGATTCTCCAGTTTGAAAATCTCGTGGATGTTGGTCCGGTTG
. : . : . : . : . : . :
JMFF020F22+ AGAATTGTGATCTTCCGGAGGGTGTTTTGGGCGTCGGTGGGGAACATCAGCGGCTTCGTC
JMFF002A21+ TC
JMFF051P02+ AGAATTGTGATCTTCCGGAGGGTGTTTTGGGCGTCGGTGGGGAACATCAGCGGCTTCGTC
____________________________________________________________
consensus AGAATTGTGATCTTCCGGAGGGTGTTTTGGGCGTCGGTGGGGAACATCAGCGGCTTCGTC
. : . : . : . : . : . :
JMFF020F22+ ACCGACTGCGGCCACCACGTGGTCAGGAGGGTGTTCTCGTTGGTGAAAAAGAACTTGTTC
JMFF002A21+ ACCGACTGCGGCCACCACGTGGTCAGGAGGGTGTTCTCGTTGGTGAAAAAGAACTTGTTC
JMFF051P02+ ACCGACTGCGGCCACCACGTGGTCAGGAGGGTGTTCTCGTTGGTGAAAAAGAACTTGTTC
____________________________________________________________
consensus ACCGACTGCGGCCACCACGTGGTCAGGAGGGTGTTCTCGTTGGTGAAAAAGAACTTGTTC
. : . : . : . : . : . :
JMFF020F22+ CCGGCGGCGCCGCAGAACACCGCCACTTTCTCCCCAAGTATCGAGGTCTTGAAAACCTCC
JMFF002A21+ CCGGCGGCGCCGCAGAACACCGCCACTTTCTCCCCAAGTATCGAGGTCTTGAAAACCTCC
JMFF051P02+ CCGGCGGCGCCGCAGAACACCGCCACTTTCTCCCCAAGTATCGAGGTCTTGAAAACCTCC
____________________________________________________________
consensus CCGGCGGCGCCGCAGAACACCGCCACTTTCTCCCCAAGTATCGAGGTCTTGAAAACCTCC
. : . : . : . : . : . :
JMFF020F22+ GGCGAATACTTCTTCATCCTGTCGGATATGTATTTCTCCGGCACCATCAGGTCAATGTTT
JMFF002A21+ GGCGAATACTTCTTCATCCTGTCGGATATGTATTTCTCCGGCACCATCAGGTCAATGTTT
JMFF051P02+ GGCGAATACTTCTTCATCCTGTCGGATATGTATTTCTCCGGCACCATCAGGTCAATGTTT
____________________________________________________________
consensus GGCGAATACTTCTTCATCCTGTCGGATATGTATTTCTCCGGCACCATCAGGTCAATGTTT
. : . : . : . : . : . :
JMFF020F22+ TCTCCGATCACCGGCCAGCCGGTGGAGCCTGGCGGGAGGTTTGGTTTTGAGGTATTGGCC
JMFF002A21+ TCTCCGATCACCGGCCAGCCGGTGGAGCCTGGCGGGAGGTTTGGTTTTGAGGTATTGGCC
JMFF051P02+ TCTCCGATCACCGGCCAGCCGGTGGAGCCTGGCGGGAGGTTTGGTTTTGAGGTATTGGCC
____________________________________________________________
consensus TCTCCGATCACCGGCCAGCCGGTGGAGCCTGGCGGGAGGTTTGGTTTTGAGGTATTGGCC
. : . : . : . : . : . :
JMFF020F22+ TTAGTGATGAAGTAAATGATGGAAAGGGACACGTAAAGGACTG
JMFF002A21+ TTAGTGATGAAGTAAATGATGGAAAGGGACACGTAAAGGACTGAAAAGAAAAGTGAGTAA
JMFF051P02+ TTAGTGATGAAGTAAATGATGGAAAGGGACACGTAAAGGACTGAAAAGAAAAGTGAGTAA
____________________________________________________________
consensus TTAGTGATGAAGTAAATGATGGAAAGGGACACGTAAAGGACTGAAAAGAAAAGTGAGTAA
. : . : . : . : . : . :
JMFF002A21+ AGGAGAAAATCATCCATGTTTTCACT
JMFF051P02+ AGGAGAAAATCATCCATGTTTTCACTTAATTGTCTTCTTCAATCAATCACAATCAGAATC
____________________________________________________________
consensus AGGAGAAAATCATCCATGTTTTCACTTAATTGTCTTCTTCAATCAATCACAATCAGAATC