Contig 006109:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051H06Sequence343006109 (5)emb|CDO96919.1|5e-11unnamed protein product [Coffea canephora]457020264ref|XP_009631007.1|1e-15PREDICTED: beta-galactosidase 13-like [Nicotiana tomentosiformis]
JMFS066G06Sequence374006109 (5)emb|CDO96919.1|7e-24unnamed protein product [Coffea canephora]
JMFS072B05Sequence317006109 (5)emb|CDO96919.1|2e-12unnamed protein product [Coffea canephora]
JMFS078C09Sequence365006109 (5)emb|CDO96919.1|2e-20unnamed protein product [Coffea canephora]
JMFS146E06Sequence334006109 (5)emb|CDO96919.1|6e-12unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS066G06+                            TGTTCCAGAACACATATGTTTGGATCACATTCAAACCTCCCTC
JMFS078C09+                                        CATATGTTTGGATCACATTCAAACCTCCCTC
                      ____________________________________________________________
consensus                              TGTTCCAGAACACATATGTTTGGATCACATTCAAACCTCCCTC
 
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JMFS066G06+           TTTAGCTCTTTTGAGGACGTCCGGCCACATCTCAGGAGGCATACGGGGATAGTGAATGGA
JMFS072B05+                         GGACGTCCGGCCACATCTCAGGAGGCATACGGGGATAGTGAATGGA
JMFS146E06+                         GGACGTCCGGCCACATTTCAGGAGGCATACGGGGATAGTGAATGGA
JMFS078C09+           TTTAGCTCTTTTGAGGACGTCCGGCCACATCTCAGGAGGCATACGGGGATAGTGAATGGA
JMFF051H06+                            CGTCCGGCCACATTTCAGGAGGCATACGGGGATAGTGAATGGA
                      ____________________________________________________________
consensus             TTTAGCTCTTTTGAGGACGTCCGGCCACATCTCAGGAGGCATACGGGGATAGTGAATGGA
 
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JMFS066G06+           GCCTGCGAATAAGATATCTCTGGTTCCATCAATAAAAAAAGATTTACTATCATACGTCAC
JMFS072B05+           GCCTGCGAATAAGATATCTCTGGTTCCATCAATAAAAAAAGATTTACTATCATACGTCAC
JMFS146E06+           GCCTGCGAATAAGATATCTTTGGTTCCATCAATAAAAAAAGATTTACTATCATACGTCAC
JMFS078C09+           GCCTGCGAATAAGATATCTCTGGTTCCATCAATAAAAAAAGATTTACTATCATACGTCAC
JMFF051H06+           GCCTGCGAATAAGATATCTTTGGTTCCATCAATAAAAAAAGATTTTCTATCATACGTCAC
                      ____________________________________________________________
consensus             GCCTGCGAATAAGATATCTCTGGTTCCATCAATAAAAAAAGATTTACTATCATACGTCAC
 
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JMFS066G06+           CGTCTTGCCATTGTTACCCACCACCATGCTTGCAACTAACATCCATAGCAGCCCCACCAT
JMFS072B05+           CGTCTTGCCATTGTTACCCACCACCATGCTCGCAACTAACATCCATAGCAGCCCCACCAT
JMFS146E06+           CGTCTTGCCATTGTTACCCACCACCATGCTTGCAACTAACATCCATAGCAGCCCCACCAT
JMFS078C09+           CGTCTTGCCATTGTTACCCACCACCATGCTTGCAACTAACATCCATAGCAGCCCCACCAT
JMFF051H06+           CGTCTTGCCATTGTTACCCACCACCATGCTTGCAACTAACATCCATAGCAGCCCCCCCAT
                      ____________________________________________________________
consensus             CGTCTTGCCATTGTTACCCACCACCATGCTTGCAACTAACATCCATAGCAGCCCCACCAT
 
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JMFS066G06+           AAGAACACACCTCGCCCTACCCATTCCAATGCTTTACTGG                    
JMFS072B05+           AAGAACACACCTCGCCCTACCCATTCCAATGCTTTACTGG                    
JMFS146E06+           AAGAACACACCTCGCCCTACCCATTTCAATGCTTTACTG                     
JMFS078C09+           AAGAACACACCTCGCCCTACCCATTCCAATGCTTTACTGG                    
JMFF051H06+           AAGAACACACCTCGCCCTACCCATTCCAATGCTTTACTGXXXXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus             AAGAACACACCTCGCCCTACCCATTCCAATGCTTTACTGGNNNNNNNNNNNNNNNNNNNN
 
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JMFF051H06+           XXXXXXXXXXXXXXAATATAATTATTATATATTCCTTCCTTAATTGTTTTTTTTTTTCTT
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNAATATAATTATTATATATTCCTTCCTTAATTGTTTTTTTTTTTCTT
 
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JMFF051H06+           TTATTACAAATCAATTATAATTTTGATTTGATATCTCTATCAAAATCAATACATAGTCAT
                      ____________________________________________________________
consensus             TTATTACAAATCAATTATAATTTTGATTTGATATCTCTATCAAAATCAATACATAGTCAT