Contig 006102:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050B18Sequence570006102 (2)ref|XP_009772801.1|1e-27PREDICTED: dnaJ homolog subfamily C member 2 [Nicotiana sylvestris]612018086ref|XP_009595406.1|1e-58PREDICTED: uncharacterized protein F54F2.9 [Nicotiana tomentosiformis]
JMFN033J09Sequence500006102 (2)ref|XP_009772801.1|6e-20PREDICTED: dnaJ homolog subfamily C member 2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF050B18+                                        TCCCGGCTTGCCCACAGGATGCTTCCCCAAC
                      ____________________________________________________________
consensus                                          TCCCGGCTTGCCCACAGGATGCTTCCCCAAC
 
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JMFN033J09+                      CACCTCCACATCTCCTTCGCTCCAATCCTTCTCCTCCACCACTCCATTC
JMFF050B18+           AACTTCCTCAACACCTCCACATCTCCTTCGCTCCAATCCTTCTCCTCCACCACTCCATTC
                      ____________________________________________________________
consensus             AACTTCCTCAACACCTCCACATCTCCTTCGCTCCAATCCTTCTCCTCCACCACTCCATTC
 
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JMFN033J09+           CCCAATTTCAATTTCCCCTCACTTTTCTCGGTCGACCCGTTGATCTTTACGGGTTCTGGA
JMFF050B18+           CCCAATTTCAATTTCCCCTCACTTTTCTCGGTCGACCCGTTGATC-TTACGGGTTCTGGA
                      ____________________________________________________________
consensus             CCCAATTTCAATTTCCCCTCACTTTTCTCGGTCGACCCGTTGATCTTTACGGGTTCTGGA
 
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JMFN033J09+           GCATGGGTGGCAATAGACCCAGATCCGGATTCAATGGACTTCCTAACGGGTTTCCCTGAT
JMFF050B18+           GCATGGGTGGCAATAGACCCAGATCCGGATTCAATGGACTTCCTAACGGGTTTCCCTGAT
                      ____________________________________________________________
consensus             GCATGGGTGGCAATAGACCCAGATCCGGATTCAATGGACTTCCTAACGGGTTTCCCTGAT
 
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JMFN033J09+           CTCTTACCGGATTTCTTATTTTCAGGCTCAGCATCAATGGGATCGTTGAATTGGACAGGA
JMFF050B18+           CTCTTACCGGATTTCTTATTTTCAGGCTCAGCATCAATGGGATCGTTGAATTGGACAGGA
                      ____________________________________________________________
consensus             CTCTTACCGGATTTCTTATTTTCAGGCTCAGCATCAATGGGATCGTTGAATTGGACAGGA
 
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JMFN033J09+           GGGCCGACCCCGACACGGATATCGCCGGCGGTGATGGACAGCGGCGCAAAGGGGCCAATG
JMFF050B18+           GGGCCGACCCCGACACGGATATCGCCGGCGGTGATGGACAGCGGCGCAAAGGGGCCAATG
                      ____________________________________________________________
consensus             GGGCCGACCCCGACACGGATATCGCCGGCGGTGATGGACAGCGGCGCAAAGGGGCCAATG
 
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JMFN033J09+           AGGAGGGAAATTGAAAGCCATAAAAGGATGGATCTCAGAGGCTCAGAGGTGAAGTAAAAT
JMFF050B18+           AGGAGGGAAATTGAAAGCCATAAAAGGATGGATCTCAGAGGCTCAGAGGTGAAGTAAAAT
                      ____________________________________________________________
consensus             AGGAGGGAAATTGAAAGCCATAAAAGGATGGATCTCAGAGGCTCAGAGGTGAAGTAAAAT
 
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JMFN033J09+           AGGGAGAGAACAAGAAGAGGGATGGAGAGAGAGAGGGAGATGAAGAGAGTAGGTCGGTGT
JMFF050B18+           AGGGAGAGAACAAGAAGAGGGATGGAGAGAGAGAGGGAGATGAAGAGAGTAGGTCGGTGT
                      ____________________________________________________________
consensus             AGGGAGAGAACAAGAAGAGGGATGGAGAGAGAGAGGGAGATGAAGAGAGTAGGTCGGTGT
 
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JMFN033J09+           AGAGAGGGTTTTAGAGGATGTGAATCGTCGTCGGCGGCGGCGGCATGGGATTGAGGTAAG
JMFF050B18+           AGAGAGGGTTTTAGAGGATGTGAATCGTCGTCGGAGGCGGCGGCATGGGATTGAGGTAAG
                      ____________________________________________________________
consensus             AGAGAGGGTTTTAGAGGATGTGAATCGTCGTCGGCGGCGGCGGCATGGGATTGAGGTAAG
 
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JMFN033J09+           GGCTTGGAGTGGAGGACAAATCTGGGTCTGG                             
JMFF050B18+           GGCTTGGAGTGGAGGACAAATCTGGGTCTGGCGTCCTCGTCCAGAAACTCCATGGTCAAT
                      ____________________________________________________________
consensus             GGCTTGGAGTGGAGGACAAATCTGGGTCTGGCGTCCTCGTCCAGAAACTCCATGGTCAAT