Contig 006101:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016L02Sequence322006101 (3)131012527 (4)gb|KJB42103.1|9e-14hypothetical protein B456_007G137300 [Gossypium raimondii]
JMFF035N02Sequence571006101 (3)
JMFF049O14Sequence638006101 (3)392012932 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF049O14+ TTCGGATGAAGAGCTGNACGAATCTTTACACTTTTCTT
                      ____________________________________________________________
consensus TTCGGATGAAGAGCTGNACGAATCTTTACACTTTTCTT
 
. : . : . : . : . : . :
JMFF035N02+ ACCTTAGTTTTTGGAGTTGGGCCAGCAATGTTTCTGCAGCTT
JMFF049O14+ CCTTCCCCTTCTCCTCTAACCTTAGTTTTTGGAGTGGGGCCAGCAATGTTTCTGCAGCTT
                      ____________________________________________________________
consensus CCTTCCCCTTCTCCTCTAACCTTAGTTTTTGGAGTTGGGCCAGCAATGTTTCTGCAGCTT
 
. : . : . : . : . : . :
JMFF035N02+ CCGTAATCTTCTTTTCATGATCTTGATCAAGCAAATCACACGGGTTAGGGTTAGAACAAT
JMFF049O14+ CCGTAATCTTCTTTTCATGATCTTGATCAAGCAAATCACACGGGTTAGGGTTAGAACAAT
                      ____________________________________________________________
consensus CCGTAATCTTCTTTTCATGATCTTGATCAAGCAAATCACACGGGTTAGGGTTAGAACAAT
 
. : . : . : . : . : . :
JMFF035N02+ CCAACCCGAAACCAATCTGGGTCAACGTAGACAGATCCTTGGACAAATTCTTGAGCAATT
JMFF049O14+ CCAACCCGAAACCAATCTGGGTCAACGTAGACAGATCCTTGGACAAATTCTTGAGCAATT
                      ____________________________________________________________
consensus CCAACCCGAAACCAATCTGGGTCAACGTAGACAGATCCTTGGACAAATTCTTGAGCAATT
 
. : . : . : . : . : . :
JMFF035N02+ TCGACCTCTTCTTCAGCATTTTCTTCCTCTTTTTCTCCTTGACCTTATCATCGCGCCGGA
JMFF049O14+ TCGACCTCTTCTTCAGCATTTTCTTCCTCTTTTTCTCCTTGACCTTATCATCGCGCCGGA
                      ____________________________________________________________
consensus TCGACCTCTTCTTCAGCATTTTCTTCCTCTTTTTCTCCTTGACCTTATCATCGCGCCGGA
 
. : . : . : . : . : . :
JMFF035N02+ GAGTCTCCGATTCGACCTCGCACCTGATTCTCCGGCGGGAGGTCGAATAGTACCCCAAGT
JMFF016L02+ TTCTCCGGCGGGAGGTCGAATAGTACCCCAAGT
JMFF049O14+ GAGTCTCCGATTCGACCTCGCACCTGATTCTCCGGCGGGAGGTCGAATAGTACCCCAAGT
                      ____________________________________________________________
consensus GAGTCTCCGATTCGACCTCGCACCTGATTCTCCGGCGGGAGGTCGAATAGTACCCCAAGT
 
. : . : . : . : . : . :
JMFF035N02+ GGCCCTCGTCGGTAAACCCAGAAGCCAGCCACTTGCGCCCCACAGAGAAGGGAATCTCCG
JMFF016L02+ GGCCCTNGTCGGTAAACCCAGAAGCCAGCCACTTGCGCCCCACAGAGAAGGGAATCTCCG
JMFF049O14+ GGCCCTCGTCGGTAAACCCAGAAGCCAGCCACTTGCGCCCCACAGAGAAGGGAATCTCCG
                      ____________________________________________________________
consensus GGCCCTCGTCGGTAAACCCAGAAGCCAGCCACTTGCGCCCCACAGAGAAGGGAATCTCCG
 
. : . : . : . : . : . :
JMFF035N02+ CGTGATGAGAAGATCGGGAACCGATTCCCGAGCTGACGGCGCAAGGGACTCGCCGGAAAA
JMFF016L02+ CGTGATGAGAAGATCGGGANCCGATTCCCGAGCTGACGGCGCAAGGGACTCGCCGGAAAA
JMFF049O14+ CGTGATGAGAAGATCGGGAACCGATTCCCGAGCTGACGGCGCAAGGGACTCGCCGGAAAA
                      ____________________________________________________________
consensus CGTGATGAGAAGATCGGGAACCGATTCCCGAGCTGACGGCGCAAGGGACTCGCCGGAAAA
 
. : . : . : . : . : . :
JMFF035N02+ CACCCGATGTGGCGTAGGCATCCATAGCTTAAACGTCGGTAATTCTATCGCTGGAATCGT
JMFF016L02+ CACCCGATGTGGCGTAGGCATCCATAGCTTAAACGTCGGTAATTCTATCGCTGGAATCGT
JMFF049O14+ CACCCGATGTGGCGTAGGCATCCATAGCTTAAACGTCGGTAATTCTATCGCTGGAATCGT
                      ____________________________________________________________
consensus CACCCGATGTGGCGTAGGCATCCATAGCTTAAACGTCGGTAATTCTATCGCTGGAATCGT
 
. : . : . : . : . : . :
JMFF035N02+ AGATTGAAGTAAACAACGTTTGATAATCCGATTCAGTGAATATTTATTGATTGATTTCTG
JMFF016L02+ AGATTGAAGTAAACAACGTTTGATAATCCGATTCAGTGAATATTTATNGATTGATTTCTG
JMFF049O14+ AGATTGAAGTAAACAACGTTTGATAATCCGATTCAGTGAATATTTATTGATTGATTTCTG
                      ____________________________________________________________
consensus AGATTGAAGTAAACAACGTTTGATAATCCGATTCAGTGAATATTTATTGATTGATTTCTG
 
. : . : . : . : . : . :
JMFF035N02+ CAATTCTATTCGCGATGGGAAAAGGGAAAGGCATAGAAGAAGCAATTCT
JMFF016L02+ CAATTCTATTCGCGATGGGAAAAGGGAAAGGCATAGAAGAAGCAATTCT
JMFF049O14+ CAATTCTATTCGCGATGGGAAAAGGGAAAGGCATAGAAGAAGCAATTCTATTGGTGATAA
                      ____________________________________________________________
consensus CAATTCTATTCGCGATGGGAAAAGGGAAAGGCATAGAAGAAGCAATTCTATTGGTGATAA