| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038H17 | Sequence | 561 | 006099 (7) | ref|XP_009631638.1| | 3e-93 | PREDICTED: proteasome subunit alpha type-6 [Nicotiana tomentosiformis] | 746 | 006099 (7) | ref|XP_004251692.1| | 5e-112 | PREDICTED: proteasome subunit alpha type-6 [Solanum lycopersicum] ref|XP_0063452 |
| JMFF049L01 | Sequence | 624 | 006099 (7) | ref|XP_009797939.1| | 4e-104 | PREDICTED: proteasome subunit alpha type-6 [Nicotiana sylvestris] sp|Q9XG77.1|PS | 619 | 006099 (7) | ref|XP_004251692.1| | 5e-97 | PREDICTED: proteasome subunit alpha type-6 [Solanum lycopersicum] ref|XP_0063452 |
| JMFN039K14 | Sequence | 624 | 006099 (7) | ref|XP_009631638.1| | 7e-111 | PREDICTED: proteasome subunit alpha type-6 [Nicotiana tomentosiformis] | |||||
| JMSF043M09 | Sequence | 749 | 006099 (7) | ref|XP_009797939.1| | 1e-142 | PREDICTED: proteasome subunit alpha type-6 [Nicotiana sylvestris] sp|Q9XG77.1|PS | 695 | 006099 (7) | ref|XP_009631638.1| | 8e-90 | PREDICTED: proteasome subunit alpha type-6 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF043M09- GTATATATAAC
____________________________________________________________
consensus GTATATATAAC
. : . : . : . : . : . :
rJMSF043M09- ATTAAAATGAAGTGCGAAGAGTGTTCAAAGATGGTGGTAAATCAGTATTCTCCCAGAACT
____________________________________________________________
consensus ATTAAAATGAAGTGCGAAGAGTGTTCAAAGATGGTGGTAAATCAGTATTCTCCCAGAACT
. : . : . : . : . : . :
rJMSF043M09- TCAAACAGCACAATACCCATCAAATTAGGGAAAACTTGCAGGCAACAGGTTACGGGTATA
____________________________________________________________
consensus TCAAACAGCACAATACCCATCAAATTAGGGAAAACTTGCAGGCAACAGGTTACGGGTATA
. : . : . : . : . : . :
rJMSF043M09- ATAAAATCGAGCTATTTGAGAGAACGTTGCATCAGAACAATTTTTTTAGCCCAGCATTCT
____________________________________________________________
consensus ATAAAATCGAGCTATTTGAGAGAACGTTGCATCAGAACAATTTTTTTAGCCCAGCATTCT
. : . : . : . : . : . :
rJMSF043M09- AAGCGTGTATAAAAATTAACAAATTTTCAGTACCGGGATGGATTTTTGACCAAATAGATG
____________________________________________________________
consensus AAGCGTGTATAAAAATTAACAAATTTTCAGTACCGGGATGGATTTTTGACCAAATAGATG
. : . : . : . : . : . :
rJMSF043M09- GTTACTCCATTGCTAATTAATTTAGTCACGCTCGCTGATAGCTGTCAAGTGCTTATCGAT
rJMFF049L01- ATTAGTCGCGCTCGCTAATAGCTGTCAAGTGCTCATCAAT
rJMFF038H17- TTAGTCGCGCTCGCTAATAGCTGTCAAGTGCTCATCAAT
____________________________________________________________
consensus GTTACTCCATTGCTAATTAATTTAGTCGCGCTCGCTAATAGCTGTCAAGTGCTCATCAAT
. : . : . : . : . : . :
rJMSF043M09- CTCCTCAGTCGACAGCACTCTAAAGACTGGATCTTCTTGACTCACAACACCGACCTCAAT
rJMFF049L01- CTCCTCGGTTGATAACACTCTAAAAGCTTGATCTTCTTGCCTCACGACACCAACCTCAAT
rJMFF038H17- CTCCTCGGTTGATAACACTCTAAAAGCTTGATCTTCTTGCCTCACGACACCAACCTCAAT
____________________________________________________________
consensus CTCCTCGGTTGATAACACTCTAAAAGCTTGATCTTCTTGCCTCACGACACCAACCTCAAT
. : . : . : . : . : . :
rJMSF043M09- CTCACTGGCCTTGAAATCCTCCTGTAGAACAGATTGAAGTGCAGAAATTGCAGTCTGTAC
rJMFF049L01- CTCACTGGCCTTGAAATCCTCCTGTAAAATGGATTGAAGAGCAGAAATTGTAGTCTGTAC
rJMFF038H17- CTCACTGGCCTTGAAATCCTCCTGTAAAATGGATTGAAGAGCAGAAATTGTAGTCTGTAC
JMSF043M09+ GTAGAACAGATTGAAGTGCAGAAATTGCAGTCTGTAC
____________________________________________________________
consensus CTCACTGGCCTTGAAATCCTCCTGTAGAACAGATTGAAGTGCAGAAATTGCAGTCTGTAC
. : . : . : . : . : . :
rJMSF043M09- AGTTTCATCGTAGGAGAAAGCTGGGTCATTTTTCATTTTTTCCTCAAGAAAGTTGATTGC
rJMFF049L01- AGTTTCCTCATAGGAGAAAGCTGGGTCATTTTTCATTTTCTTCTCCAGAAAGTTGATTGC
rJMFF038H17- AGTTTCCTCATAGGAGAAAGCTGGGTCATTTTTCATTTTCTTCTCCAGAAAGTTGATTGC
JMSF043M09+ AGTTTCATCGTAGGAGAAAGCTGGGTCATTTTTCATTTTTTCCTCAAGAAAGTTGATTGC
____________________________________________________________
consensus AGTTTCATCGTAGGAGAAAGCTGGGTCATTTTTCATTTTTTCCTCAAGAAAGTTGATTGC
. : . : . : . : . : . :
rJMSF043M09- TTCTTGTTCTTTTGATCCAGCACTGGTTGCCTTGTGACCAAAAAAGTGACCAGCAGGATC
rJMFF049L01- CTCTTGTTCTTTTGATCCAGCACTAGTTGCCTTGTGACCAAAAAAATGACCAGCGGGATC
rJMFF038H17- CTCTTGTTCTTTTGATCCAGCACTAGTTGCCTTGTGACCAAAAAAATGACCAGCGGGATC
JMSF043M09+ TTCTTGTTCTTTTGATCCAGCACTGGTTGCCTTGTGACCAAAAAAGTGACCAGCAGGATC
JMFN039K14+ TGCCCTGTGACCAAAAAAATGACCAGCGGGATC
JMFF049L01+ ACCAAAAAAATGACCAGCGGGATC
____________________________________________________________
consensus TTCTTGTTCTTTTGATCCAGCACTGGTTGCCTTGTGACCAAAAAAATGACCAGCGGGATC
. : . : . : . : . : . :
rJMSF043M09- ACACTTGAAGAGCTCAGGCCCTTTCTCGTCATCAATGCCCAACACCATTGCAACTATTCC
rJMFF049L01- ACACTTGAAGAGCTGAGGTCCTTTCTCGTCATCAATACCCAGAACCATTGCAACTACTCC
rJMFF038H17- ACACTTGAAGAGCTGAGGTCCTTTCTCGTCATCAATACCCAGAACCATTGCAACTACTCC
JMSF043M09+ ACACTTGAAGAGCTCAGGCCCTTTCTCGTCATCAATGCCCAACACCATTGCAACTATTCC
JMFN039K14+ ACACTTGAAGAGCTGAGGTCCTTTCTCGTCATCAATACCCAGAACCATTGCAACTACTCC
JMFF038H17+ GTCCTTTCTCGTCATCAATACCCAGAACCATTGCAACTACTCC
JMFF049L01+ ACACTGANAGAGCTGAGGTCCTTTCTCGTCATCAATACCCAGAACCATTGCAACTACTCC
____________________________________________________________
consensus ACACTTGAAGAGCTGAGGTCCTTTCTCGTCATCAATACCCAGAACCATTGCAACTACTCC
. : . : . : . : . : . :
rJMSF043M09- AAGAGGTCTCATATACGCATGCTGGGTATAGACCTGAGATTTGTCTGCAATCCATCTAGA
rJMFF049L01- AAGGGGTCTCATGTAGGCATGCTGGGTATAAACCTGAGATTTGTCTGCAATCCATCTGGC
rJMFF038H17- AAGGGGTCTCATGTAGGCATGCTGGGTATAAACCTGAGATTTGTCTGCAATCCATCTGGC
JMSF043M09+ AAGAGGTCTCATATACGCATGCTGGGTATAGACCTGAGATTTGTCTGCAATCCATCTAGA
JMFN039K14+ AAGGGGTCTCATGTAGGCATGCTGGGTATAAACCTGAGATTTGTCTGCAATCCATCTGGC
JMFF038H17+ AAGGGGTCTCATGTAGGCATGCTGGGTATAAACCTGAGATTTGTCTGCAATCCATCTGGC
JMFF049L01+ AAGGGGTCTCATGTAGGCATGCTGGGTATAAACCTGAGATTTGTCTGCAATCCATCTGGC
____________________________________________________________
consensus AAGGGGTCTCATGTAGGCATGCTGGGTATAAACCTGAGATTTGTCTGCAATCCATCTGGC
. : . : . : . : . : . :
rJMSF043M09- CAGCACATCCACTGGCATTTCATA
rJMFF049L01- CAGCACATCCACTGGCATCTCATATCCATATTTAAAACGGAATTCAGC
rJMFF038H17- CAGCACATCCACTGGCATCTCATATCCATATTTAAAACGGAATTCAGCAGCCTCATTCCT
JMSF043M09+ CAGCACATCCACTGGCATTTCATATCCATATCTAAAGCGAAACTCAGCTGCTTCATTCCT
JMFN039K14+ CAGCACATCCACTGGCATCTCATATCCATATTTAAAACGGAATTCAGCAGCCTCATTCCT
JMFF038H17+ CAGCACATCCACTGGCATCTCATATCCATATTTAAAACGGAATTCAGCAGCCTCATTCCT
JMFF049L01+ CAGCACATCCACTGGCATCTCATATCCATATTTAAAACGGAATTCAGCAGCCTCATTCCT
____________________________________________________________
consensus CAGCACATCCACTGGCATCTCATATCCATATTTAAAACGGAATTCAGCAGCCTCATTCCT
. : . : . : . : . : . :
rJMFF038H17- AGCCTGTTGGACCAAGGTCCTGGCATCAGCAGTCATTCCAGTAGCGAGG
JMSF043M09+ AGCCTGTTGGACAAGTGTCCTGGCATCAGCTGTCATTCCAGTAGCCAATAATCCAATATA
JMFN039K14+ AGCCTGTTGGACCAAGGTCCTGGCATCAGCAGTCATTCCAGTAGCGAGGAGTCCAAGATA
JMFF038H17+ AGCCTGTTGGACCAAGGTCCTGGCATCAGCAGTCATTCCAGTAGCGAGGAGTCCAAGATA
JMFF049L01+ AGCCTGTTGGACCAAGGTCCTGGCATCAGCAGTCATTCCAGTAGCGAGGAGTCCAAGATA
____________________________________________________________
consensus AGCCTGTTGGACCAAGGTCCTGGCATCAGCAGTCATTCCAGTAGCGAGGAGTCCAAGATA
. : . : . : . : . : . :
JMSF043M09+ CTTGGTGATGGGAAACAAATGGGTTACACTAGTCTGATCCAATAGCTTATCCGGAACTTT
JMFN039K14+ TTTGGTAATTTGAAACAAATGGGTCACACTTGTCTGGTCCAATAGCTTATCCGGGACTTT
JMFF038H17+ TTTGGTAATTTGAAACAAATGGGTCACACTTGTCTGGTCCAATAGCTTATCCGGGACTTT
JMFF049L01+ TTTGGTAATTTGAAACAAATGGGTCACACTTGTCTGGTCCAATAGCTTATCCGGGACTTT
____________________________________________________________
consensus TTTGGTAATTTGAAACAAATGGGTCACACTTGTCTGGTCCAATAGCTTATCCGGGACTTT
. : . : . : . : . : . :
JMSF043M09+ CTTCTGAGTAACAACACAAACGGAGTCCTTTCCTCTAACACCAATGGAGGTGATTCCGGC
JMFN039K14+ CTTCTGAGTAACAACACAAACGGAGTCCTTTCCGCGCACACCAATGGAGGTGATTCCGGC
JMFF038H17+ CTTCTGAGTAACAACACAAACGGAGTCCTTTCCGCGCACACCAATGGAGGTGATTCCGGC
JMFF049L01+ CTTCTGAGTAACAACACAAACGGAGTCCTTTCCGCGCACACCAATGGAGGTGATTCCGGC
____________________________________________________________
consensus CTTCTGAGTAACAACACAAACGGAGTCCTTTCCGCGCACACCAATGGAGGTGATTCCGGC
. : . : . : . : . : . :
JMSF043M09+ AGCCTTTACAGCCTTAAATGCGTATTCGACTTGGAAGAGTCGACCTTCGGGAGAGAAGAT
JMFN039K14+ GGCCTTCACCGCTTTGAATGCGTACTCGACTTGGAAGAGACGACCCTCCGGGGAGAAGAT
JMFF038H17+ GGCCTTCACCGCTTTGAATGCGTACTCGACTTGGAAGAGACGACCCTCCGGGGAGAAGAT
JMFF049L01+ GGCCTTCACCGCTTTGAATGCGTACTCGACTTGGAAGAGACGACCCTCCGGGGAGAAGAT
____________________________________________________________
consensus GGCCTTCACCGCTTTGAATGCGTACTCGACTTGGAAGAGACGACCCTCCGGGGAGAAGAT
. : . : . : . : . : . :
JMSF043M09+ CGTGATGTGACG
JMFN039K14+ CGTAATGTGACGGTCGTAGCCCCCTCCGCTTCCTCTACTCATCTTTT
JMFF038H17+ CGTAATGTGACG
JMFF049L01+ CGTAATGTGACGGTCGTAGCCCCCTCCGCTTCCTCTACTCATCTTTTAACTTTTATGTAA
____________________________________________________________
consensus CGTAATGTGACGGTCGTAGCCCCCTCCGCTTCCTCTACTCATCTTTTAACTTTTATGTAA
. : . : . : . : . : . :
JMFF049L01+ TGTTACTGATCCTTTTCACAGTTGATTCTTCGATCCGGCGAAGTATACAAAAGCAAAAAA
____________________________________________________________
consensus TGTTACTGATCCTTTTCACAGTTGATTCTTCGATCCGGCGAAGTATACAAAAGCAAAAAA
. : . : . : . : . : . :
JMFF049L01+ CGATAAAGACTCGAAGAGGGTTTTCTTGTTTCCCAATTCAACACTCCATATACTACGAGC
____________________________________________________________
consensus CGATAAAGACTCGAAGAGGGTTTTCTTGTTTCCCAATTCAACACTCCATATACTACGAGC