Contig 006093:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008O19Sequence500006093 (13)ref|XP_009795723.1|3e-47PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri694013635 (15)ref|XP_010099378.1|3e-107Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFF021L18Sequence462006093 (13)ref|XP_009795723.1|3e-39PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri577013635 (15)ref|XP_010099378.1|1e-81Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFF028D06Sequence492006093 (13)ref|XP_009795723.1|2e-45PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri747013635 (15)dbj|BAD94384.1|9e-116ketol-acid reductoisomerase [Arabidopsis thaliana]
JMFF028L03Sequence475006093 (13)ref|XP_009795723.1|9e-35PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri689013635 (15)emb|CBI21968.3|2e-116unnamed protein product [Vitis vinifera]
JMFF029E18Sequence503006093 (13)ref|XP_009795723.1|4e-47PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri554013635 (15)ref|XP_010099378.1|8e-73Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFF034K10Sequence474006093 (13)ref|XP_009795723.1|5e-35PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri678013635 (15)ref|XP_010099378.1|1e-110Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFF036A03Sequence532006093 (13)ref|XP_009795723.1|1e-54PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri701013635 (15)dbj|BAD94384.1|9e-113ketol-acid reductoisomerase [Arabidopsis thaliana]
JMFF040N12Sequence563006093 (13)ref|XP_009795723.1|5e-60PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri793013635 (15)ref|XP_002280094.1|7e-132PREDICTED: ketol-acid reductoisomerase, chloroplastic [Vitis vinifera] emb|CAN6
JMFF045F24Sequence626006093 (13)ref|XP_008353740.1|3e-75PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Malus domestica]578013635 (15)ref|XP_010099378.1|1e-77Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFF048B18Sequence365006093 (13)ref|XP_009795723.1|5e-15PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri293013635 (15)ref|XP_010099378.1|3e-08Ketol-acid reductoisomerase [Morus notabilis] gb|EXB78103.1| Ketol-acid reductoi
JMFS099B09Sequence618006093 (13)ref|XP_008353740.1|1e-75PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Malus domestica]
JMFS114F04Sequence560006093 (13)ref|XP_009795723.1|3e-63PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Nicotiana sylvestri
JMSF023B21Sequence653006093 (13)ref|XP_008353740.1|4e-78PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Malus domestica]761013635 (15)emb|CDY49236.1|4e-131BnaA09g55150D [Brassica napus]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF045F24+ GAAATTAAGAGCAGAACCAGATCACTCCCTGCAACAGTCTC
JMFS099B09+ GAAATTAAGAGCAGAACCAGATCACTCCCTGCAACAGTCTC
JMSF023B21+ CCTGAGCTGCGTCTGAAATTAAGAGCAGAACCAGATCACTCCCTGCAACAGTCTC
                      ____________________________________________________________
consensus CCTGAGCTGCGTCTGAAATTAAGAGCAGAACCAGATCACTCCCTGCAACAGTCTC
 
. : . : . : . : . : . :
JMFF045F24+ CCATATGTCTCCTAAGGTCCCATTCTCTTCAGTAAATCCAGCTGCACGGGCCTCGTTAAA
JMFS114F04+ AGGTTCCATTCTCTTCAGTAAATCCAGCTGCACGGGCCTCGTTAAA
JMFS099B09+ CCATATGTCTCCTAAGGTTCCATTCTCTTCAGTAAATCCAGCTGCACGGGCCTCGTTAAA
JMFF036A03+ TAAA
JMFF040N12+ CTTCAGTAAATCCAGCTGCACGGGCCTCGTTAAA
JMSF023B21+ CCATATGTCTCCTAAGGTTCCATTCTCTTCAGTAAATCCAGCTGCACGGGCCTCGTTAAA
                      ____________________________________________________________
consensus CCATATGTCTCCTAAGGTTCCATTCTCTTCAGTAAATCCAGCTGCACGGGCCTCGTTAAA
 
. : . : . : . : . : . :
JMFF045F24+ GGAGCGAGAACCCTTCCTCAAACCAATCTTAACAACGATATCAGATTTTGCTTCTACAAG
JMFS114F04+ GGAGCGAGAACCCTTCCTCAAACCAATCTTAACAACGATATCAGATTTTGCTTCTACAAG
JMFS099B09+ GGAGCGAGAACCCTTCCTCAAACCAATCTTAACAACGATATCAGATTTTGCTTCTACAAG
JMFF036A03+ GGAGCGAGAACCCTTCCTCAAACCAATCTTAACAACGATATCAGATTTTGCTTCTACAAG
JMFF040N12+ GGAGCGAGAACCCTTCCTCAAACCAATCTTAACAACGATATCAGATTTTGCTTCTACAAG
JMFF029E18+ ACAACGATATCAGATTTTGCTTCTACAAG
JMFF028D06+ ATATCAGATTTTGCTTCTACAAG
JMFF008O19+ TAACAACGATATCAGATTTTGCTTCTACAAG
JMFF028L03+ ACAAG
JMFF034K10+ ACAAG
JMSF023B21+ GGAGCGAGAACCCTTCCTCAAACCAATCTTAACAACGATATCAGATTTTGCTTCTACAAG
                      ____________________________________________________________
consensus GGAGCGAGAACCCTTCCTCAAACCAATCTTAACAACGATATCAGATTTTGCTTCTACAAG
 
. : . : . : . : . : . :
JMFF045F24+ AGAATCCCTCAAATTCTGTGCTTGTGCAGGT-CCCTGTGAACCCCAACCAATAACTCCGA
JMFS114F04+ AGAATCCCTCAAATTCTGTGCTTGTGCAGGT-CCCTGTGAACCCCAACCAATAACTCCGA
JMFS099B09+ AGAATCCCTCAAATTCTGTGCTTGTGCAGGT-CCCTGTGAACCCCAACCAATAACTCCGA
JMFF036A03+ AGAATCCCTCAAATTCTGTGCTTGTGCAGGT-CCCTGTGAACCCCAACCAATAACTCCGA
JMFF040N12+ AGAATCCCTCAAATTCTGTGCTTGTGCAGGT-CCCTGTGAACCCCAACCAATAACTCCGA
JMFF029E18+ AGAATCCCTCAAATTCTGTGCTTGTGCAGGT-CCCTGTGAACCCCAACCAATAACTCCGA
JMFF028D06+ AGAATCCCTCAAATTCTGTGCTTGTGCAGGT-CCCTGTGAACCCCAACCAATAACTCCGA
JMFF008O19+ AGAATCCCTCAAATTCTGTGCTTGTGCAGGT-CCCTGTGAACCCCAACCAATAACTCCGA
JMFF021L18+ ATTCTGTGCTTGTGCAGGT-CCCTGTGAACCCCAACCAATAACTCCGA
JMFF028L03+ AGAATCCCTCAAATTCTGTGCTTGTGCAGGTCCCCTGTGAACCCCAACCAATAACTCCGA
JMFF034K10+ AGAATCCCTCAAATTCTGTGCTTGTGCAGGTCCCCTGTGAACCCCAACCAATAACTCCGA
JMSF023B21+ AGAATCCCTCAAATTCTGTGCTTGTGCAGGT-CCCTGTGAACCCCAACCAATAACTCCGA
                      ____________________________________________________________
consensus AGAATCCCTCAAATTCTGTGCTTGTGCAGGT-CCCTGTGAACCCCAACCAATAACTCCGA
 
. : . : . : . : . : . :
JMFF045F24+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAACAAATCCCTCCCACCTCTCA
JMFS114F04+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAACAAATCCCTCCCACCTCTCA
JMFS099B09+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAACAAATCCCTCCCACCTCTCA
JMFF036A03+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAACAAATCCCTCCCACCTCTCA
JMFF040N12+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAACAAATCCCTCCCACCTCTCA
JMFF029E18+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAACAAATCCCTCCCACCTCTCA
JMFF028D06+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAAAAAATCCCTCCCACCTCTCA
JMFF008O19+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAAAAAATCCCTCCCACCTCTCA
JMFF021L18+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAACAAATCCCTCCCACCTCTCA
JMFF028L03+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAACAAATCCCTCCCACCTCTCA
JMFF034K10+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAACAAATCCCTCCCACCTCTCA
JMSF023B21+ TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAACAAATCCCTCCCACCTCTCA
JMFF048B18+ TCTCA
                      ____________________________________________________________
consensus TCTGCTTGATACCCTTAAAAGCATCAGGCAACAGCTTAAACAAATCCCTCCCACCTCTCA
 
. : . : . : . : . : . :
JMFF045F24+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMFS114F04+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMFS099B09+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMFF036A03+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMFF040N12+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMFF029E18+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMFF028D06+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMFF008O19+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMFF021L18+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMFF028L03+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMFF034K10+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMSF023B21+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
JMFF048B18+ CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
                      ____________________________________________________________
consensus CAATATACTCATCGTGGCCAGCCAGGGACACTTTCTCCTTCTTAAACACGGATGTCTCGA
 
. : . : . : . : . : . :
JMFF045F24+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMFS114F04+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMFS099B09+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMFF036A03+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMFF040N12+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMFF029E18+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMFF028D06+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMFF008O19+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMFF021L18+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMFF028L03+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMFF034K10+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMSF023B21+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
JMFF048B18+ AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
                      ____________________________________________________________
consensus AATCGAGCAAAGCCGGGGACTTGGTGGCGATGGGAGCGGAGACCATGACGGACGCCATGG
 
. : . : . : . : . : . :
JMFF045F24+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMFS114F04+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMFS099B09+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMFF036A03+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMFF040N12+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMFF029E18+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMFF028D06+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMFF008O19+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMFF021L18+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMFF028L03+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMFF034K10+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMSF023B21+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
JMFF048B18+ CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
                      ____________________________________________________________
consensus CGGAGCCGGTGGCCGTGCCAGAGGACTGAAGAATCCGAGCTCGGAGCGGCTTGAGCGAAG
 
. : . : . : . : . : . :
JMFF045F24+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMFS114F04+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMFS099B09+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMFF036A03+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMFF040N12+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMFF029E18+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMFF028D06+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMFF008O19+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMFF021L18+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMFF028L03+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMFF034K10+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMSF023B21+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
JMFF048B18+ CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
                      ____________________________________________________________
consensus CGCTGGAAGTGGAAAGGAAGCCGAGAGTGTGCGGCAGGGCTCTGGTGGATGGCTTTAGGG
 
. : . : . : . : . : . :
JMFF045F24+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMFS114F04+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMFS099B09+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMFF036A03+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMFF040N12+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMFF029E18+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMFF028D06+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMFF008O19+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMFF021L18+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMFF028L03+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMFF034K10+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMSF023B21+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
JMFF048B18+ TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
                      ____________________________________________________________
consensus TTTTGGAAGAGGCGGCGGAGGAAGTGATGGAGAAGGAAGTTGGCGCCGCCACCGACATTG
 
. : . : . : . : . : . :
JMFF045F24+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGT
JMFS114F04+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAA
JMFS099B09+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAA
JMFF036A03+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGTTA
JMFF040N12+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGTTAAC
JMFF029E18+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGTTAACAGAAG
JMFF028D06+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGTTAAC
JMFF008O19+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGTTAAC
JMFF021L18+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGTTAACAGAAG
JMFF028L03+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGTTAAC
JMFF034K10+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGTTA
JMSF023B21+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGTTAACAGAAG
JMFF048B18+ GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGTTAACAGAAGGGTTC
                      ____________________________________________________________
consensus GACCGTAAGCGATAAAACTCAAGGAGAGAAAGAAAGTGGTAAGTGTTAACAGAAGGGTTC