Contig 006087:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026P15Sequence592006087 (5)ref|XP_004242723.1|4e-59PREDICTED: NEDD8 ultimate buster 1 [Solanum lycopersicum]583019111ref|XP_009787853.1|156PREDICTED: uncharacterized protein LOC104235740 [Nicotiana sylvestris]
JMFF047H11Sequence599006087 (5)ref|XP_004242723.1|2e-77PREDICTED: NEDD8 ultimate buster 1 [Solanum lycopersicum]608008367 (2)ref|XP_009621397.1|1e-10PREDICTED: NEDD8 ultimate buster 1 [Nicotiana tomentosiformis]
JMFN038K03Sequence593006087 (5)ref|XP_009787853.1|273PREDICTED: uncharacterized protein LOC104235740 [Nicotiana sylvestris]
JMFS153F10Sequence605006087 (5)ref|XP_004242723.1|2e-90PREDICTED: NEDD8 ultimate buster 1 [Solanum lycopersicum]
JMSF028B16Sequence693006087 (5)ref|XP_004242723.1|9e-110PREDICTED: NEDD8 ultimate buster 1 [Solanum lycopersicum]771008367 (2)ref|XP_009621397.1|2e-20PREDICTED: NEDD8 ultimate buster 1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFN038K03+                         GAGAGGAGTCATTCCATAACACTTTTGCTCCCTGAAATTCATGGCA
                      ____________________________________________________________
consensus                           GAGAGGAGTCATTCCATAACACTTTTGCTCCCTGAAATTCATGGCA
 
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JMFN038K03+           TACAAAGCTTAGAATTCTGAGCTAAACACAATGGAGGAAAATTTGAGATAACAAAATTCA
                      ____________________________________________________________
consensus             TACAAAGCTTAGAATTCTGAGCTAAACACAATGGAGGAAAATTTGAGATAACAAAATTCA
 
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JMFN038K03+           ACTAACAGGATCTCTCTTTGCCTACGAAGATCCTCATCCCGTTTGCTTGCTGCTTTCTCT
                      ____________________________________________________________
consensus             ACTAACAGGATCTCTCTTTGCCTACGAAGATCCTCATCCCGTTTGCTTGCTGCTTTCTCT
 
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JMFN038K03+           TTCTCCTCAACAAGAAAATTAACAGCACTTTGAACATCTTGATTGTTCATACGCAGTGCT
                      ____________________________________________________________
consensus             TTCTCCTCAACAAGAAAATTAACAGCACTTTGAACATCTTGATTGTTCATACGCAGTGCT
 
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JMFN038K03+           TTCTTTGCATCACCTTCTTTATAGCCCATGCTCAAAAGTAGCGACAGTGCTTCATCTGGA
                      ____________________________________________________________
consensus             TTCTTTGCATCACCTTCTTTATAGCCCATGCTCAAAAGTAGCGACAGTGCTTCATCTGGA
 
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JMFN038K03+           ATTTGAAGCTGGAAATATTTCGCTTGTGCAGAACTCAAAGACTGTCTAGCTTTTTCAAAC
                      ____________________________________________________________
consensus             ATTTGAAGCTGGAAATATTTCGCTTGTGCAGAACTCAAAGACTGTCTAGCTTTTTCAAAC
 
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JMFN038K03+           TGACCACTGTGATATCCAACGACTCCTTCTAACAGCTCCAGTCTTACATGTAGGGAAATC
                      ____________________________________________________________
consensus             TGACCACTGTGATATCCAACGACTCCTTCTAACAGCTCCAGTCTTACATGTAGGGAAATC
 
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JMFN038K03+           TCAGGATAGCGCCCCCCTTGAAGAAGTCTAACACGACTAGCTTCCTTCCCATGAGCACGC
                      ____________________________________________________________
consensus             TCAGGATAGCGCCCCCCTTGAAGAAGTCTAACACGACTAGCTTCCTTCCCATGAGCACGC
 
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JMFN038K03+           TCAAGCCCTTCCCTGGCTTTTGCAAGGCGGATGCCTGCAACTGAGAGCCAGCTGATGTCT
JMSF028B16+                                GCAAGGCGGATGCCTGCAACTGAGAGCCAGCTGATGTCT
                      ____________________________________________________________
consensus             TCAAGCCCTTCCCTGGCTTTTGCAAGGCGGATGCCTGCAACTGAGAGCCAGCTGATGTCT
 
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JMFN038K03+           TGGAGCATAAAGTAACACCACACCAAATCTATTTGCAGAATGGCTACATTATCAACCATC
JMFS153F10+                                            TGCAGAATGGCTACATTATCAACCATC
JMSF028B16+           TGGAGCATAAAGTAACACCACACCAAATCTATTTGCAGAATGGCTACATTATCAACCATC
                      ____________________________________________________________
consensus             TGGAGCATAAAGTAACACCACACCAAATCTATTTGCAGAATGGCTACATTATCAACCATC
 
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JMFN038K03+           T                                                           
JMFS153F10+           TCAATAACTTTAGGATTGCAAAGAGAGAAGGCCTCCTCCCCCATGGTGAGAACCTCAAGT
JMSF028B16+           TCAATAACTTTAGGATTGCAAAGAGAGAAGGCCTCCTCCCCCATGGTGAGAACCTCAAGT
                      ____________________________________________________________
consensus             TCAATAACTTTAGGATTGCAAAGAGAGAAGGCCTCCTCCCCCATGGTGAGAACCTCAAGT
 
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JMFS153F10+           GCCTCTCTATATTGTTGCTTTCTGATCAATGCTTTGCCATTTGCATGAAGCATGAGACCC
JMSF028B16+           GCCTCTCTATATTGTTGCTTTCTGATCAATGCTTTGCCATTTGCATGAAGCATGAGACCC
                      ____________________________________________________________
consensus             GCCTCTCTATATTGTTGCTTTCTGATCAATGCTTTGCCATTTGCATGAAGCATGAGACCC
 
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JMFS153F10+           ATCATTATAGCCCGCTGGTCAGTATCAGATCCAAACTGCAGTTTTTCTCCACTCTGATTT
JMSF028B16+           ATCATTATAGCCCGCTGGTCAGTATCAGATCCAAACTGCAGTTTTTCTCCACTCTGATTT
JMFF026P15+                      CCGCTGGTCAGTATCAGATCCAAACTGCAGTTTTTCTCCACTCTGATTT
JMFF047H11+                      CCGCTGGTCAGTATCAGATCCAAACTGCAGTTTTTCTCCACTCTGATTT
                      ____________________________________________________________
consensus             ATCATTATAGCCCGCTGGTCAGTATCAGATCCAAACTGCAGTTTTTCTCCACTCTGATTT
 
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JMFS153F10+           TCAAGTTCTAGGTTAAAGTCTTCTACAGGTAATGAACCTTCTGTATGTCTCTGGGCCAAT
JMSF028B16+           TCAAGTTCTAGGTTAAAGTCTTCTACAGGTAATGAACCTTCTGTATGTCTCTGGGCCAAT
JMFF026P15+           TCAAGTTCTAGGTTAAAGTCTTCTACAGGTAATGAACCTTCTGTATGTCTCTGGGCCAAT
JMFF047H11+           TCAAGTTCTAGGTTAAAGTCTTCTACAGGTAATGAACCTTCTGTATGTCTCTGGGCCAAT
                      ____________________________________________________________
consensus             TCAAGTTCTAGGTTAAAGTCTTCTACAGGTAATGAACCTTCTGTATGTCTCTGGGCCAAT
 
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JMFS153F10+           GACATAGCAGCAGTCTTGAGCCTTGAAAGTCTAGAAGAGCGTTCCTCTTCAGCCAGAGAT
JMSF028B16+           GACATAGCAGCAGTCTTGAGCCTTGAAAGTCTAGAAGAGCGTTCCTCTTCAGCCAGAGAT
JMFF026P15+           GACATAGCAGCAGTCTTGAGCCTTGAAAGTCTAGAAGAGCGTTCCTCTTCAGCCAGAGAT
JMFF047H11+           GACATAGCAGCAGTCTTGAGCCTTGAAAGTCTAGAAGAGCGTTCCTCTTCAGCCAGAGAT
                      ____________________________________________________________
consensus             GACATAGCAGCAGTCTTGAGCCTTGAAAGTCTAGAAGAGCGTTCCTCTTCAGCCAGAGAT
 
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JMFS153F10+           TCCTCCTTGAAGGACTTGCCACGATCAGGAGAAACCTTGGAGGCCAAAACCTTCGCATTA
JMSF028B16+           TCCTCCTTGAAGGACTTGCCACGATCAGGAGAAACCTTGGAGGCCAAAACCTTCGCATTA
JMFF026P15+           TCCCCCTTGAAGGACTTGCCACGATCAGGAGAAACCTTGGAGGCCAAAACCTTCGCATTA
JMFF047H11+           TCCTCCTTGAAGGGCTTGCCACGATCAGGAGAAACCTTGGAGGCCAAAACCTTCGCATTA
                      ____________________________________________________________
consensus             TCCTCCTTGAAGGACTTGCCACGATCAGGAGAAACCTTGGAGGCCAAAACCTTCGCATTA
 
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JMFS153F10+           TTTTTGACGCCCAATTGGGTGAGCTTCTCCGTACCGTCTCCGTCTTTCAGCAATTTTCCA
JMSF028B16+           TTTTTGACGCCCAATTGGGTGAGCTTCTCCGTACCGTCTCCGTCTTTCAGCAATTTTCCA
JMFF026P15+           TTTTTGACGCCCAATTGGGTGAGCTTCTCCGTACCGTCTCCGTCTTTCAGCAATTTTCCA
JMFF047H11+           TTTTTGACGCCCAATTGGGTGAGCTTCTCCGTACCGTCTCCGTCTTTCAGCAATTTTCCA
                      ____________________________________________________________
consensus             TTTTTGACGCCCAATTGGGTGAGCTTCTCCGTACCGTCTCCGTCTTTCAGCAATTTTCCA
 
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JMFS153F10+           GCACAGATGAGGTTTATGGTCTCCGGCGGCGCAACGCAGCCCGATCGCCGGATAACCTCT
JMSF028B16+           GCACAGATGAGGTTTATGGTCTCCGGCGGCGCAACGCAGCCCGATCGCCGGATAACCTCT
JMFF026P15+           GCACAGATGAGGTTTATGGTCTCCGGCGGCGCAACGCAGCCCGATCGCCGGATAACCTCT
JMFF047H11+           GCACAGATGAGGTTTATGGTCTCCGGCGGCGCAACGCAGCCCGATCGCCGGATAACCTCT
                      ____________________________________________________________
consensus             GCACAGATGAGGTTTATGGTCTCCGGCGGCGCAACGCAGCCCGATCGCCGGATAACCTCT
 
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JMFS153F10+           TCCCTAAGCATAGACACCGTCCACTCCTCCAGCTCTACCTCCAACACCCCACTCCATGCC
JMSF028B16+           TCCCTAAGCATAGACACCGTCCACTCCTCCAGCTCTACCTCCAACACCCCACTCCATGCC
JMFF026P15+           TCCCTAAGCATAGACACCGTCCACTCCTCCAGCTCTACCTCCAACACCCCACTCCATGCC
JMFF047H11+           TCCCTAAGCATAGACACCGTCCACTCCTCCAGCTCTACCTCCAACACCCCACTCCATGCC
                      ____________________________________________________________
consensus             TCCCTAAGCATAGACACCGTCCACTCCTCCAGCTCTACCTCCAACACCCCACTCCATGCC
 
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JMFS153F10+           CCTGCTATCTTTAGCTTTGCCATACCCCCCATACTTCT                      
JMSF028B16+           CCTGCTATCTTTAGCTTTGCCATACCCCCCATACTTCTTCTCACAGAGTTTCTC      
JMFF026P15+           CCTGCTATCTTTAGCTTTGCCATACCCCCCATACTTCTTCTCACAGAGTTTCTC      
JMFF047H11+           CCTGCTATCTTTAGCTTTGCCATACCCCCCATACTTCTTCTCACAGAGTTTCTCCTCCGG
                      ____________________________________________________________
consensus             CCTGCTATCTTTAGCTTTGCCATACCCCCCATACTTCTTCTCACAGAGTTTCTCCTCCGG