Contig 006079:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021F13Sequence390006079 (2)tpg|DAA47597.1|3e-43TPA: putative methionine synthase family protein [Zea mays]445003997 (8)tpg|DAA50625.1|3e-65TPA: putative methionine synthase family protein [Zea mays]
JMFF045H06Sequence669006079 (2)gb|KDO54954.1|4e-97hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]282003997 (8)gb|ABR25991.1|1e-04methyltetrahydropteroyltriglutamate#homocysteine methyltransferase [Oryza sativ

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF045H06+ TGGCAGGTT
                      ____________________________________________________________
consensus TGGCAGGTT
 
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JMFF045H06+ GGATAGCAACAAGTATGATACTGGACCAACAAGAACTGGGACAGTTCNAACACCAAGCGC
                      ____________________________________________________________
consensus GGATAGCAACAAGTATGATACTGGACCAACAAGAACTGGGACAGTTCNAACACCAAGCGC
 
. : . : . : . : . : . :
JMFF045H06+ NTTAGCCTCCTTGTATTCGGTCACTGCTTTGTGGGAAGCATAAGAGAATTTGACATCAGG
                      ____________________________________________________________
consensus NTTAGCCTCCTTGTATTCGGTCACTGCTTTGTGGGAAGCATAAGAGAATTTGACATCAGG
 
. : . : . : . : . : . :
JMFF045H06+ ACCCAACTCAGGGACAATGAAGTGGTAGTTGGTATCGAACCACTTGGTCATTTCCATGGC
                      ____________________________________________________________
consensus ACCCAACTCAGGGACAATGAAGTGGTAGTTGGTATCGAACCACTTGGTCATTTCCATGGC
 
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JMFF045H06+ AGGGACAGAGGCATTTCCTCTGGCCATGGAGAAGTAAGTATCAAATCCAATCTCACCGCC
                      ____________________________________________________________
consensus AGGGACAGAGGCATTTCCTCTGGCCATGGAGAAGTAAGTATCAAATCCAATCTCACCGCC
 
. : . : . : . : . : . :
JMFF021F13+ CACCGAGCATGGCAGTGGTGTCGAGCACGTGATC
JMFF045H06+ AGCCCAGTTGTACCTTGGGGGTACAGCACCGAGCATGGCAGTGGTGTCGAGCACGTGATC
                      ____________________________________________________________
consensus AGCCCAGTTGTACCTTGGGGGTACAGCACCGAGCATGGCAGTGGTGTCGAGCACGTGATC
 
. : . : . : . : . : . :
JMFF021F13+ ATAGTAAGAGAAAGTGTTGNTGGGAATGAACTTGATCCCAGCATCAGCCATCTGTTTCCA
JMFF045H06+ ATAGTAAGAGAAAGTGTTGCTGGGAATGAACTTGATCCCAGCATCAGCCATCTGTTTCCA
                      ____________________________________________________________
consensus ATAGTAAGAGAAAGTGTTGCTGGGAATGAACTTGATCCCAGCATCAGCCATCTGTTTCCA
 
. : . : . : . : . : . :
JMFF021F13+ TATGGATGCCCTGAGGTCAGCTGACACCTTCTGCAGATCCTCAGCACTGCTCTTCCCATC
JMFF045H06+ TATGGATGCCCTGAGGTCAGCTGACACCTTCTGCAGATCCTCAGCACTGCTCTTCCCATC
                      ____________________________________________________________
consensus TATGGATGCCCTGAGGTCAGCTGACACCTTCTGCAGATCCTCAGCACTGCTCTTCCCATC
 
. : . : . : . : . : . :
JMFF021F13+ CCAAAAAGACTCAAGAGCAAATTTGAGCTCTCTCTTCGGGCCCATGCGGGGATATCCAAC
JMFF045H06+ CCAAAAAGACTCAAGAGCAAATTTGAGCTCTCTCTTCGGGCCCATACGGGGATATCCAAC
                      ____________________________________________________________
consensus CCAAAAAGACTCAAGAGCAAATTTGAGCTCTCTCTTCGGGCCCATGCGGGGATATCCAAC
 
. : . : . : . : . : . :
JMFF021F13+ AATGTGAGATGCCATTTTTTCTGTTCTACGTATAGATTAGCTTATTAGCTTAAATTAGAT
JMFF045H06+ AATGTGAGATGCCATTTTTTCTGTTCTACGTATAGATTAGCTTATTAGCTTAAATTAGAT
                      ____________________________________________________________
consensus AATGTGAGATGCCATTTTTTCTGTTCTACGTATAGATTAGCTTATTAGCTTAAATTAGAT
 
. : . : . : . : . : . :
JMFF021F13+ GAAGAACAAGCGTAAATGAGTGAGAGAAAACGAAAAGCTAGTACTAATCTGCAGTTTTTA
JMFF045H06+ GAAGAACAAGCGTAAATGAGTGAGAGAAAACGAAAAGCTAGTACTAATCTGCAGTTTTTA
                      ____________________________________________________________
consensus GAAGAACAAGCGTAAATGAGTGAGAGAAAACGAAAAGCTAGTACTAATCTGCAGTTTTTA
 
. : . : . : . : . : . :
JMFF021F13+ TGAGCTATATAAAGAAGCTAGTGGTGACGAATGCTAGAAATATTTCATCATGATTC
JMFF045H06+ TGAGCTATATAAAGAAGCTAGTGGTGACGAATGCTAGAAATATTTCATCATGATTCCGGT
                      ____________________________________________________________
consensus TGAGCTATATAAAGAAGCTAGTGGTGACGAATGCTAGAAATATTTCATCATGATTCCGGT