Contig 006079:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021F13Sequence390006079 (2)tpg|DAA47597.1|3e-43TPA: putative methionine synthase family protein [Zea mays]445003997 (8)tpg|DAA50625.1|3e-65TPA: putative methionine synthase family protein [Zea mays]
JMFF045H06Sequence669006079 (2)gb|KDO54954.1|4e-97hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]282003997 (8)gb|ABR25991.1|1e-04methyltetrahydropteroyltriglutamate#homocysteine methyltransferase [Oryza sativ

Alignment

This contig is upended


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JMFF045H06+                                                              TGGCAGGTT
                      ____________________________________________________________
consensus                                                                TGGCAGGTT
 
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JMFF045H06+           GGATAGCAACAAGTATGATACTGGACCAACAAGAACTGGGACAGTTCNAACACCAAGCGC
                      ____________________________________________________________
consensus             GGATAGCAACAAGTATGATACTGGACCAACAAGAACTGGGACAGTTCNAACACCAAGCGC
 
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JMFF045H06+           NTTAGCCTCCTTGTATTCGGTCACTGCTTTGTGGGAAGCATAAGAGAATTTGACATCAGG
                      ____________________________________________________________
consensus             NTTAGCCTCCTTGTATTCGGTCACTGCTTTGTGGGAAGCATAAGAGAATTTGACATCAGG
 
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JMFF045H06+           ACCCAACTCAGGGACAATGAAGTGGTAGTTGGTATCGAACCACTTGGTCATTTCCATGGC
                      ____________________________________________________________
consensus             ACCCAACTCAGGGACAATGAAGTGGTAGTTGGTATCGAACCACTTGGTCATTTCCATGGC
 
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JMFF045H06+           AGGGACAGAGGCATTTCCTCTGGCCATGGAGAAGTAAGTATCAAATCCAATCTCACCGCC
                      ____________________________________________________________
consensus             AGGGACAGAGGCATTTCCTCTGGCCATGGAGAAGTAAGTATCAAATCCAATCTCACCGCC
 
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JMFF021F13+                                     CACCGAGCATGGCAGTGGTGTCGAGCACGTGATC
JMFF045H06+           AGCCCAGTTGTACCTTGGGGGTACAGCACCGAGCATGGCAGTGGTGTCGAGCACGTGATC
                      ____________________________________________________________
consensus             AGCCCAGTTGTACCTTGGGGGTACAGCACCGAGCATGGCAGTGGTGTCGAGCACGTGATC
 
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JMFF021F13+           ATAGTAAGAGAAAGTGTTGNTGGGAATGAACTTGATCCCAGCATCAGCCATCTGTTTCCA
JMFF045H06+           ATAGTAAGAGAAAGTGTTGCTGGGAATGAACTTGATCCCAGCATCAGCCATCTGTTTCCA
                      ____________________________________________________________
consensus             ATAGTAAGAGAAAGTGTTGCTGGGAATGAACTTGATCCCAGCATCAGCCATCTGTTTCCA
 
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JMFF021F13+           TATGGATGCCCTGAGGTCAGCTGACACCTTCTGCAGATCCTCAGCACTGCTCTTCCCATC
JMFF045H06+           TATGGATGCCCTGAGGTCAGCTGACACCTTCTGCAGATCCTCAGCACTGCTCTTCCCATC
                      ____________________________________________________________
consensus             TATGGATGCCCTGAGGTCAGCTGACACCTTCTGCAGATCCTCAGCACTGCTCTTCCCATC
 
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JMFF021F13+           CCAAAAAGACTCAAGAGCAAATTTGAGCTCTCTCTTCGGGCCCATGCGGGGATATCCAAC
JMFF045H06+           CCAAAAAGACTCAAGAGCAAATTTGAGCTCTCTCTTCGGGCCCATACGGGGATATCCAAC
                      ____________________________________________________________
consensus             CCAAAAAGACTCAAGAGCAAATTTGAGCTCTCTCTTCGGGCCCATGCGGGGATATCCAAC
 
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JMFF021F13+           AATGTGAGATGCCATTTTTTCTGTTCTACGTATAGATTAGCTTATTAGCTTAAATTAGAT
JMFF045H06+           AATGTGAGATGCCATTTTTTCTGTTCTACGTATAGATTAGCTTATTAGCTTAAATTAGAT
                      ____________________________________________________________
consensus             AATGTGAGATGCCATTTTTTCTGTTCTACGTATAGATTAGCTTATTAGCTTAAATTAGAT
 
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JMFF021F13+           GAAGAACAAGCGTAAATGAGTGAGAGAAAACGAAAAGCTAGTACTAATCTGCAGTTTTTA
JMFF045H06+           GAAGAACAAGCGTAAATGAGTGAGAGAAAACGAAAAGCTAGTACTAATCTGCAGTTTTTA
                      ____________________________________________________________
consensus             GAAGAACAAGCGTAAATGAGTGAGAGAAAACGAAAAGCTAGTACTAATCTGCAGTTTTTA
 
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JMFF021F13+           TGAGCTATATAAAGAAGCTAGTGGTGACGAATGCTAGAAATATTTCATCATGATTC    
JMFF045H06+           TGAGCTATATAAAGAAGCTAGTGGTGACGAATGCTAGAAATATTTCATCATGATTCCGGT
                      ____________________________________________________________
consensus             TGAGCTATATAAAGAAGCTAGTGGTGACGAATGCTAGAAATATTTCATCATGATTCCGGT