clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF002N11 | Sequence | 416 | 006077 (2) | gb|EYU37635.1| | 2e-40 | hypothetical protein MIMGU_mgv1a003216mg [Erythranthe guttata] | 782 | 009799 (2) | gb|ACN78491.1| | 5e-119 | putative phosphoglycerate dehydrogenase [Arachis hypogaea] |
JMFF045B07 | Sequence | 647 | 006077 (2) | ref|XP_004236276.1| | 1e-81 | PREDICTED: D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like [Solanum ly | 613 | 009799 (2) | ref|XP_009761354.1| | 3e-74 | PREDICTED: D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like [Nicotiana |
This contig is upended
. : . : . : . : . : . :
JMFF045B07+ ACAACCAGTGTTNTNCNGACAAGGGATACACCAACATATTTGTTCCT
____________________________________________________________
consensus ACAACCAGTGTTNTNCNGACAAGGGATACACCAACATATTTGTTCCT
. : . : . : . : . : . :
JMFF045B07+ CTGCCACTTTCCGGCTTTAACAGAGGCATCGGCTTGGGCAATGTTTCGAGACATGGCGGT
____________________________________________________________
consensus CTGCCACTTTCCGGCTTTAACAGAGGCATCGGCTTGGGCAATGTTTCGAGACATGGCGGT
. : . : . : . : . : . :
JMFF045B07+ GAGCAATGCGATGCCGTGCTCGGCAGCGGCCACAGTATTGGCAGTGGGCGCGTTCACTAC
____________________________________________________________
consensus GAGCAATGCGATGCCGTGCTCGGCAGCGGCCACAGTATTGGCAGTGGGCGCGTTCACTAC
. : . : . : . : . : . :
JMFF045B07+ AAGGCAGCCGTGCTCAGTGGCGGCGGCGAGATCGACGTTGTCGATACCGACGCCGGCCCG
____________________________________________________________
consensus AAGGCAGCCGTGCTCAGTGGCGGCGGCGAGATCGACGTTGTCGATACCGACGCCGGCCCG
. : . : . : . : . : . :
JMFF002N11+ ACGACCTTGAGGCGTCCGGCGGAGGATTCGAAGACCTCGCGGCTGACTTTGGTGGC
JMFF045B07+ GCCGACGACCTTGAGGCGTCCGGCGGAGGATTCGAAGACCTCGCGGCTGACTTTGGTGGC
____________________________________________________________
consensus GCCGACGACCTTGAGGCGTCCGGCGGAGGATTCGAAGACCTCGCGGCTGACTTTGGTGGC
. : . : . : . : . : . :
JMFF002N11+ GCTGCGGACAATCAGCGCATCGCAGAGCGAGATCTTGGTGCAGAGCTCCTCGGGGCTGAG
JMFF045B07+ GCTGCGGACAATCAGCGCATCGCAGAGCGAGATCTTGGTGCAGAGCTCCTCGGGGCTGAG
____________________________________________________________
consensus GCTGCGGACAATCAGCGCATCGCAGAGCGAGATCTTGGTGCAGAGCTCCTCGGGGCTGAG
. : . : . : . : . : . :
JMFF002N11+ ATTGTAGGAGCAATCGACATTAGCGAACTCCTTGAGCAGGCTGAGCCCAGCCTCCCCGAG
JMFF045B07+ ATTGTAGGAGCAATCGACATTAGCGAACTCCTTGAGCAGGCTGAGCCCAGCCTCCCCGAG
____________________________________________________________
consensus ATTGTAGGAGCAATCGACATTAGCGAACTCCTTGAGCAGGCTGAGCCCAGCCTCCCCGAG
. : . : . : . : . : . :
JMFF002N11+ TTTCTCGGCCACGAGGACGGTGGGCTTGGCGTCCATCGCCAGCACCACGAAGCGGAGAGC
JMFF045B07+ TTTCTCGGCCACGAGGACGGTGGGCTTGGCGTCCATCGCCAGCACCACGAAGCGGAGAGC
____________________________________________________________
consensus TTTCTCGGCCACGAGGACGGTGGGCTTGGCGTCCATCGCCAGCACCACGAAGCGGAGAGC
. : . : . : . : . : . :
JMFF002N11+ ACGGCGGCGGGGGAAAGCGGCAGTAGTGGAGACGCGGAACGCCGCCACGGAAGAGAGGTT
JMFF045B07+ ACGGCGGCGGGGGAAAGCGGCAGTAGTGGAGACGCGGAACGCCGCCACGGAAGAGAGGTT
____________________________________________________________
consensus ACGGCGGCGGGGGAAAGCGGCAGTAGTGGAGACGCGGAACGCCGCCACGGAAGAGAGGTT
. : . : . : . : . : . :
JMFF002N11+ GCTCTTCCATGAGAGGGAGGAGGTCTTGGCGGCGATTAGGGTGGTAGATGAAGCTGAAGC
JMFF045B07+ GCTCTTCCATGAGAGGGAGGAGGTCTTGGCGGCGATTAGGGTGGTAGATGAAGCTGAAGC
____________________________________________________________
consensus GCTCTTCCATGAGAGGGAGGAGGTCTTGGCGGCGATTAGGGTGGTAGATGAAGCTGAAGC
. : . : . : . : . : . :
JMFF002N11+ CGCCATTGGAATTGAATTGGAAGGTTTTGCGGCGAGAGAGAAAAGTGCAAAAAACAATAT
JMFF045B07+ CGCCATTGGAATTGAATTGGAAGGTTTTGCGGCGAGAGAGAAAAGTGCAAAAAACAATAT
____________________________________________________________
consensus CGCCATTGGAATTGAATTGGAAGGTTTTGCGGCGAGAGAGAAAAGTGCAAAAAACAATAT