Contig 006075:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030N16Sequence368006075 (2)ref|XP_011085142.1|95.5PREDICTED: uncharacterized protein LOC105167218 [Sesamum indicum]
JMFF044M11Sequence633006075 (2)ref|XP_009600294.1|2e-15PREDICTED: neurofilament medium polypeptide-like [Nicotiana tomentosiformis]596008335 (3)ref|XP_011089949.1|7e-16PREDICTED: neurofilament medium polypeptide [Sesamum indicum]

Alignment

This contig is upended


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JMFF044M11+                                      TTTCTCTTNGTCCTTCTTTTCTCCATCGTNTCC
                      ____________________________________________________________
consensus                                        TTTCTCTTNGTCCTTCTTTTCTCCATCGTNTCC
 
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JMFF044M11+           GTTTTTCTTCTGTTTTTCACCTCCGTTTCCGCCTTTTGCCTGTGGAGAGACCAGCACAAT
                      ____________________________________________________________
consensus             GTTTTTCTTCTGTTTTTCACCTCCGTTTCCGCCTTTTGCCTGTGGAGAGACCAGCACAAT
 
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JMFF044M11+           TTTTTTGTGCGTTTTGGCCTCCACTCTCTCCCGGAGCTTCTCCGGATCCACTTTCCCGAT
                      ____________________________________________________________
consensus             TTTTTTGTGCGTTTTGGCCTCCACTCTCTCCCGGAGCTTCTCCGGATCCACTTTCCCGAT
 
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JMFF044M11+           CACCGTCACCTTATCCGAGTTGCCGTCGATATCCACGGTCTGAACACCTTTTCATCCAGA
                      ____________________________________________________________
consensus             CACCGTCACCTTATCCGAGTTGCCGTCGATATCCACGGTCTGAACACCTTTTCATCCAGA
 
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JMFF044M11+           AGCAAGCACGAATTAGGAGGAAAGCAGTTGAAGTTCAGATGAAAAACAGGAAACTCATCT
                      ____________________________________________________________
consensus             AGCAAGCACGAATTAGGAGGAAAGCAGTTGAAGTTCAGATGAAAAACAGGAAACTCATCT
 
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JMFF030N16+                                                      CACCATCGTAACTCCGA
JMFF044M11+           TATTAATATGACGAGTACTGAAACAGATAAACAAGGATTTACTCACCATCGTAACTCCGA
                      ____________________________________________________________
consensus             TATTAATATGACGAGTACTGAAACAGATAAACAAGGATTTACTCACCATCGTAACTCCGA
 
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JMFF030N16+           ATAGTTTTGACGATNTTGGAAACACAACCTTCGCAATGCAAATCGGCCTNGAGAACCACG
JMFF044M11+           ATAGTTTTGACGATTTTGGAAACACAACCTTCGCAATGCAAATCGGCCTTGAGAACCACG
                      ____________________________________________________________
consensus             ATAGTTTTGACGATTTTGGAAACACAACCTTCGCAATGCAAATCGGCCTTGAGAACCACG
 
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JMFF030N16+           GNGATGCTGCCGTCGCCGCCGCCGCCTCCGTTCTCCTGTTCTCCTCCTCCGCCGCTGCTC
JMFF044M11+           GTGATGCTGCCGTCGCCGCCGCCGCCTCCGTTCTCCTGTTCTCCTCCTCCGCCGCTGCTC
                      ____________________________________________________________
consensus             GTGATGCTGCCGTCGCCGCCGCCGCCTCCGTTCTCCTGTTCTCCTCCTCCGCCGCTGCTC
 
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JMFF030N16+           TTGTTCTTCTTCTTC                                             
JMFF044M11+           TTGTTCTTCTTCTTCTGCAACACGCCATCACCATTCATGAGAACAAATTCAGTCTCCCAA
                      ____________________________________________________________
consensus             TTGTTCTTCTTCTTCTGCAACACGCCATCACCATTCATGAGAACAAATTCAGTCTCCCAA
 
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JMFF044M11+           AATGAAAAATAGGCACAGAAATTATTTCTACAAAAGGAGAGAGAGAGGTCTTACCCCACC
                      ____________________________________________________________
consensus             AATGAAAAATAGGCACAGAAATTATTTCTACAAAAGGAGAGAGAGAGGTCTTACCCCACC
 
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JMFF044M11+           CATCCTGAAAGTCTGAAACCGCCTTTCCCGATAGAATTTGGAATTTGGAAACAAAGTGGT
                      ____________________________________________________________
consensus             CATCCTGAAAGTCTGAAACCGCCTTTCCCGATAGAATTTGGAATTTGGAAACAAAGTGGT