Contig 006071:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021E16Sequence532006071 (8)ref|XP_009799147.1|5e-70PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]
JMFF032E15Sequence571006071 (8)ref|XP_009799147.1|4e-73PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]130013812 (4)
JMFF042P06Sequence635006071 (8)ref|XP_009799147.1|2e-78PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]410024400
JMFF044C10Sequence654006071 (8)ref|XP_009799147.1|3e-76PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]639013812 (4)
JMFF050J06Sequence632006071 (8)ref|XP_009799147.1|2e-76PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]528013812 (4)gb|EPS69372.1|4e-29fasciclin-like arabinogalactan protein 19, partial [Genlisea aurea]
JMFS056A11Sequence625006071 (8)ref|XP_009799147.1|6e-77PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]
JMSF015B09Sequence205006071 (8)ref|XP_008462050.1|3e-08PREDICTED: fasciclin-like arabinogalactan protein 2 [Cucumis melo]
JMSF032K07Sequence678006071 (8)ref|XP_009799147.1|1e-84PREDICTED: fasciclin-like arabinogalactan protein 2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF042P06+                                                                      T
JMSF032K07+                                    GGCTTTCAACAAATCCGCGAAGTTTTTGCAGCCTT
                      ____________________________________________________________
consensus                                      GGCTTTCAACAAATCCGCGAAGTTTTTGCAGCCTT
 
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JMFF050J06+                GTCATTAGAGTAGTCAAGTTCACGTCGGTGGGCCCCGCGGCCGGAGCTTCCGCGG
JMFF042P06+           GTTTCGTCATTAGAGTAGTCAAGTTCACGTCGGGGGGCCCCGCGGCCGGAGCTTCCGCGG
JMFS056A11+                GTCATTAGAGTAGTCAAGTTCACGTCGGTGGGCCCCGCGGCCGGAGCTTCCGCGG
JMSF032K07+           GTTTCGTCATTAGAGTAGTCAAGTTCACGTCGGTGGGCCCCGCGGCCGGAGCTTCCGCGG
JMFF044C10+                 TCATTAGAGTAGTCAAGTTCACGTCGGTGGGCCCNGCGGCCGGAGCTTCCGCGG
                      ____________________________________________________________
consensus             GTTTCGTCATTAGAGTAGTCAAGTTCACGTCGGTGGGCCCCGCGGCCGGAGCTTCCGCGG
 
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JMFF050J06+           AGGGGGAGATAATGGCGTGGCTGATCTGGAGGACGGCGATTTTGTACGGCTCCTCCAGCA
JMFF042P06+           AGGGGGAGATAATGGCGTGGCTGATCTGGAGGACGGCGATTTTGTACGGCTCCTCCAGCA
JMFS056A11+           AGGGGGAGATAATGGCGTGGCTGATCTGGAGGACGGCGATTTTGTACGGCTCCTCCAGCA
JMSF032K07+           AGGGGGAGATAATGGCGTGGCTGATCTGGAGGACGGCGATTTTGTACGGCTCCTCCAGCA
JMFF032E15+                                        AGGACGGCGATTTTGTACGGCTCCTCCAGCA
JMFF021E16+                                                             TCCTCCAGCA
JMFF044C10+           AGGGGGAGATAATGGCGTGGCTGATCTGGAGGACGGCGATTTTGTACGGCTCCTCCAGCA
                      ____________________________________________________________
consensus             AGGGGGAGATAATGGCGTGGCTGATCTGGAGGACGGCGATTTTGTACGGCTCCTCCAGCA
 
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JMFF050J06+           GGGATTTGACGTAGGTGGAGGTGAAATGGCCGTCGTTGTCCTCGGCGGCGAAGCCGACTT
JMFF042P06+           GGGATTTGACGTAGGTGGAGGTGAAATGGCCGTCGTTGTCCTCGGCGGCGAAGCCGACTT
JMFS056A11+           GGGATTTGACGTAGGTGGAGGTGAAATGGCCGTCGTTGTCCTCGGCGGCGAAGCCGACTT
JMSF032K07+           GGGATTTGACGTAGGTGGAGGTGAAATGGCCGTCGTTGTCCTCGGCGGCGAAGCCGACTT
JMFF032E15+           GGGATTTGACGTAGGTGGAGGTGAAATGGCCGTCGTTGTCCTCGGCGGCGAAGCCGACTT
JMFF021E16+           GGGATTTGACGTAGGTGGAGGTGAAATGGCCGTCGTTGTCCTCGGCGGCGAAGCCGACTT
JMFF044C10+           GGGATTTGACGTAGGTGGAGGTGAAATGGCCGTCGTTGTCCTCGGCGGCGAAGCCGACTT
                      ____________________________________________________________
consensus             GGGATTTGACGTAGGTGGAGGTGAAATGGCCGTCGTTGTCCTCGGCGGCGAAGCCGACTT
 
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JMFF050J06+           TGCCGCCCTTGAGGCTGGTGATGTTGACGTAGCCGGCGGTGCCGGGGGCCTCGCCGGTGG
JMFF042P06+           TGCCGCCCTTGAGGCTGGTGATGTTGACGTAGCCGGCGGTGCCGGGGGCCTCGCCGGTGG
JMFS056A11+           TGCCGCCCTTGAGGCTGGTGATGTTGACGTAGCCGGCGGTGCCGGGGGCCTCGCCGGTGG
JMSF032K07+           TGCCGCCCTTGAGGCTGGTGATGTTGACGTAGCCGGCGGTGCCGGGGGCCTCGCCGGTGG
JMFF032E15+           TGCCGCCCTTGAGGCTGGTGATGTTGACGTAGCCGGCGGTGCCGGGGGCCTCGCCGGTGG
JMFF021E16+           TGCCGCCCTTGAGGCTGGTGATGTTGACGTAGCCGGCGGTGCCGGGGGCCTCGCCGGTGG
JMFF044C10+           TGCCGCCCTTGAGGCTGGTGATGTTGACGTAGCCGGCGGTGCCGGGGGCCTCGCCGGTGG
                      ____________________________________________________________
consensus             TGCCGCCCTTGAGGCTGGTGATGTTGACGTAGCCGGCGGTGCCGGGGGCCTCGCCGGTGG
 
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JMFF050J06+           CCTGGTAGATGGTGGCGGTGAGCGTGGTGCCGTGGTTCATCTGGTGGAGCTTTCTAGATC
JMFF042P06+           CCTGGTAGATGGTGGCGGTGAGCGTGGTGCCGTGGTTCATCTGGTGGAGCTTTCTAGATC
JMFS056A11+           CCTGGTAGATGGTGGCGGTGAGCGTGGTGCCGTGGTTCATCTGGTGGAGCTTTCTAGATC
JMSF032K07+           CCTGGTAGATGGTGGCGGTGAGCGTGGTGCCGTGGTTCATCTGGTGGAGCTTTCTAGATC
JMFF032E15+           CCTGGTAGATGGTGGCGGTGAGCGTGGTGCCGTGGTTCATCTGGTGGAGCTTTCTAGATC
JMFF021E16+           CCTGGTAGATGGTGGCGGTGAGCGTGGTGCCGTGGTTCATCTGGTGGAGCTTTCTAGATC
JMFF044C10+           CCTGGTAGATGGTGGCGGTGAGCGTGGTGCCGTGGTTCATCTGGTGGAGCTTTCTAGATC
                      ____________________________________________________________
consensus             CCTGGTAGATGGTGGCGGTGAGCGTGGTGCCGTGGTTCATCTGGTGGAGCTTTCTAGATC
 
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JMFF050J06+           CGAAGTAGTCGGCGAAGACGTGGAGGGAGAGGATGTTCTTGACGGTGAAGAGGGAGTAGT
JMFF042P06+           CGAAGTAGTCGGCGAAGACGTGGAGGGAGAGGATGTTCTTGACGGTGAAGAGGGAGTAGT
JMFS056A11+           CGAAGTAGTCGGCGAAGACGTGGAGGGAGAGGATGTTCTTGACGGTGAAGAGGGAGTAGT
JMSF032K07+           CGAAGTAGTCGGCGAAGACGTGGAGGGAGAGGATGTTCTTGACGGTGAAGAGGGAGTAGT
JMFF032E15+           CGAAGTAGTCGGCGAAGACGTGGAGGGAGAGGATGTTCTTGACGGTGAAGAGGGAGTAGT
JMFF021E16+           CGAAGTAGTCGGCGAAGACGTGGAGGGAGAGGATGTTCTTGACGGTGAAGAGGGAGTAGT
JMFF044C10+           CGAAGTAGTCGGCGAAGACGTGGAGGGAGAGGATGTTCTTGACGGTGAAGAGGGAGTAGT
                      ____________________________________________________________
consensus             CGAAGTAGTCGGCGAAGACGTGGAGGGAGAGGATGTTCTTGACGGTGAAGAGGGAGTAGT
 
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JMFF050J06+           GCTTGTCGAGGAGGTCGCTCATTCCGGCATTGTCGACGGCGCAGACGGTGATGGTCATGC
JMFF042P06+           GCTTGTCGAGGAGGTCGCTCATTCCGGCATTGTCGACGGCGCAGACGGTGATGGTCATGC
JMFS056A11+           GCTTGTCGAGGAGGTCGCTCATTCCGGCATTGTCGACGGCGCAGACGGTGATGGTCATGC
JMSF032K07+           GCTTGTCGAGGAGGTCGCTCATTCCGGCATTGTCGACGGCGCAGACGGTGATGGTCATGC
JMFF032E15+           GCTTGTCGAGGAGGTCGCTCATTCCGGCATTGTCGACGGCGCAGACGGTGATGGTCATGC
JMFF021E16+           GCTTGTCGAGGAGGTCGCTCATTCCGGCATTGTCGACGGCGCAGACGGTGATGGTCATGC
JMFF044C10+           GCTTGTCGAGGAGGTCGCTCATTCCGGCATTGTCGACGGCGCAGACGGTGATGGTCATGC
                      ____________________________________________________________
consensus             GCTTGTCGAGGAGGTCGCTCATTCCGGCATTGTCGACGGCGCAGACGGTGATGGTCATGC
 
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JMFF050J06+           GGCGGTTGATCTCTCCGGCGAGGTGAGTTATGGTGAGGTAGTGGTTGAAGGTTGAGAACT
JMFF042P06+           GGCGGTTGATCTCTCCGGCGAGGTGAGTTATGGTGAGGTAGTGGTTGAAGGTTGAGAACT
JMFS056A11+           GGCGGTTGATCTCTCCGGCGAGGTGAGTTATGGTGAGGTAGTGGTTGAAGGTTGAGAACT
JMSF032K07+           GGCGGTTGATCTCTCCGGCGAGGTGAGTTATGGTGAGGTAGTGGTTGAAGGTTGAGAACT
JMFF032E15+           GGCGGTTGATCTCTCCGGCGAGGTGAGTTATGGTGAGGTAGTGGTTGAAGGTTGAGAACT
JMSF015B09+                        TCCGGCGAGGTGAGTTATGGTGAGGTAGTGGTTGAAGGTTGAGAACT
JMFF021E16+           GGCGGTTGATCTCTCCGGCGAGGTGAGTTATGGTGAGGTAGTGGTTGAAGGTTGAGAACT
JMFF044C10+           GGCGGTTGATCTCTCCGGCGAGGTGAGTTATGGTGAGGTAGTGGTTGAAGGTTGAGAACT
                      ____________________________________________________________
consensus             GGCGGTTGATCTCTCCGGCGAGGTGAGTTATGGTGAGGTAGTGGTTGAAGGTTGAGAACT
 
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JMFF050J06+           CGGGGTGTTTGGCCAGGATTCGGGTGATGTTGAAGCCATTTGCGGCGGCGGAGAAGAAGA
JMFF042P06+           CGGGGTGTTTGGCCAGGATTCGGGTGATGTTGAAGCCATTTGCGGCGGCGGAGAAGAAGA
JMFS056A11+           CGGGGTGTTTGGCCAGGATTCGGGTGATGTTGAAGCCATTTGCGGCGGCGGAGAAGAAGA
JMSF032K07+           CGGGGTGTTTGGCCAGGATTCGGGTGATGTTGAAGCCATTTGCGGCGGCGGAGAAGAAGA
JMFF032E15+           CGGGGTGTTTGGCCAGGATTCGGGTGATGTTGAAGCCATTTGCGGCGGCGGAGAAGAAGA
JMSF015B09+           CGGGGTGTTTGGCCAGGATTCGGGTGATGTTGAAGCCATTTGCGGCGGCGGAGAAGAAGA
JMFF021E16+           CGGGGTGTTTGGCCAGGATTCGGGTGATGTTGAAGCCATTTGCGGCGGCGGAGAAGAAGA
JMFF044C10+           CGGGGTGTTTGGCCAGGATTCGGGTGATGTTGAAGCCATTTGCGGCGGCGGAGAAGAAGA
                      ____________________________________________________________
consensus             CGGGGTGTTTGGCCAGGATTCGGGTGATGTTGAAGCCATTTGCGGCGGCGGAGAAGAAGA
 
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JMFF050J06+           GGAGGAGGAATAGTGAGAGTGGTAACGCTGCCGACAATCGCTGCATTTTTTGGGAGCTAA
JMFF042P06+           GGAGGAGGAATAGTGAGAGTGGTAACGCTGCCGACAATCGCTGCATTTTTTGGGAGCTAA
JMFS056A11+           GGAGGAGGAATAGTGAGAGTGGTAACGCTGCCGACAATCGCTGCATTTTTTGGGAGCTAA
JMSF032K07+           GGAGGAGGAATAGTGAGAGTGGTAACGCTGCCGACAATCGCTGCATTTTTTGGGAGCTAA
JMFF032E15+           GGAGGAGGAATAGTGAGAGTGGTAACGCTGCCGACAATCGCTGCATTTTTTGGGAGCTAA
JMSF015B09+           GGAGGAGGAATAGTGAGAGTGGTAACGCTGCCGACAATCGCTGCATTTTTTGGGAGCTAA
JMFF021E16+           GGAGGAGGAATAGTGAGAGTGGTAACGCTGCCGACAATCGCTGCATTTTTTGGGAGCTAA
JMFF044C10+           GGAGGAGGAATAGTGAGAGTGGTAACGCTGCCGACAATCGCTGCATTTTTTGGGAGCTAA
                      ____________________________________________________________
consensus             GGAGGAGGAATAGTGAGAGTGGTAACGCTGCCGACAATCGCTGCATTTTTTGGGAGCTAA
 
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JMFF050J06+           AGTGAGCTAAGCTAGCTGGAGTGAGTGGCTTCATTAC                       
JMFF042P06+           AGTGAGCTAAGCTAGCTGGA                                        
JMFS056A11+           AG                                                          
JMSF032K07+           AGTGAGCTAAGCTAGCTGGAGTGAGTGGCTTCTTTACACT                    
JMFF032E15+           AGTGAGCTAAGCTAGCTGGAGTGAGTGGCTTCTTTACACTATAGTATGGGGAAGCTAAAT
JMSF015B09+           AGTGAGCTAAGCTAGCTGGAGTGAGTGGCTTCTTTAC                       
JMFF021E16+           AGTGAGCTAAGCTAGCTGGAGTGAGTGGCTTCTTTACACT                    
JMFF044C10+           AGTGAGCTAAGCTAGCTGGAGTGAGTGGCTTCTTTACACTATAGTATGGGGAAGCTAAAT
                      ____________________________________________________________
consensus             AGTGAGCTAAGCTAGCTGGAGTGAGTGGCTTCTTTACACTATAGTATGGGGAAGCTAAAT