| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011B02 | Sequence | 462 | 006067 (4) | 757 | 009786 (3) | ref|XP_006348324.1| | 1e-127 | PREDICTED: uncharacterized protein LOC102585938 isoform X1 [Solanum tuberosum] | |||
| JMFF043M19 | Sequence | 630 | 006067 (4) | ref|XP_009768996.1| | 5e-15 | PREDICTED: uncharacterized protein LOC104219927 isoform X1 [Nicotiana sylvestri | 658 | 009786 (3) | ref|XP_006348324.1| | 6e-72 | PREDICTED: uncharacterized protein LOC102585938 isoform X1 [Solanum tuberosum] |
| JMSF025O03 | Sequence | 592 | 006067 (4) | ref|XP_011002766.1| | 62.0 | PREDICTED: uncharacterized protein LOC105109682 [Populus euphratica] | 767 | 016109 | ref|XP_006348325.1| | 2e-06 | PREDICTED: uncharacterized protein LOC102585938 isoform X2 [Solanum tuberosum] |
| JMSF048B10 | Sequence | 649 | 006067 (4) | ref|XP_011098193.1| | 118 | PREDICTED: uncharacterized protein LOC105176924 [Sesamum indicum] ref|XP_0110981 | 792 | 009786 (3) | ref|XP_006348324.1| | 4e-139 | PREDICTED: uncharacterized protein LOC102585938 isoform X1 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF048B10+ GCAAGCCCAAAGTCCTTGGGAACAAAATTTTGAGCTGGAAATTCCACAT
____________________________________________________________
consensus GCAAGCCCAAAGTCCTTGGGAACAAAATTTTGAGCTGGAAATTCCACAT
. : . : . : . : . : . :
JMSF048B10+ CAAATAGCTTGGGCGTCTGCGGGTTTGGCCATGAAAACGAGGGAGGGGGAATATGCGACT
JMFF043M19+ ATGAAAACGAGGGAGGGGGAATATGCGACT
____________________________________________________________
consensus CAAATAGCTTGGGCGTCTGCGGGTTTGGCCATGAAAACGAGGGAGGGGGAATATGCGACT
. : . : . : . : . : . :
JMSF048B10+ GAATCAATCCTGTAAATCCCTGTGCCAGTTTATCAGCAAAATNTTGGCCTTGCCTTTGCA
JMSF025O03+ ATCCTGTAAATCCCTGTGCCAGTTTATCAGCAAAATCTTGGCCTTGCCTTTGCA
JMFF043M19+ GAATCAATCCTGTAAATCCCTGTGCCAGTTTATCAGCAAAATCTTGGCCTTGCCTTTGCA
____________________________________________________________
consensus GAATCAATCCTGTAAATCCCTGTGCCAGTTTATCAGCAAAATCTTGGCCTTGCCTTTGCA
. : . : . : . : . : . :
JMSF048B10+ CCTNTTCCCATGCTTCAAACGATCTCTCCNCAGACATCATTTCCNCTGCTTAAATNTTCA
JMSF025O03+ CCTCTTCCCATGCTTCAAACGATCTCTCCACAGACATCATTTCCACTGCTTAAATCTTCA
JMFF043M19+ CCTCTTCCCATGCTTCAAACGATCTCTCCACAGACATCATTTCCACTGCTTAAATCTTCA
____________________________________________________________
consensus CCTCTTCCCATGCTTCAAACGATCTCTCCACAGACATCATTTCCACTGCTTAAATCTTCA
. : . : . : . : . : . :
JMSF048B10+ AAACCTAAAACTTNTAAAGGNTAATAATTTNTACTTTTCACTACAAGACTNCCAAAGCGA
JMSF025O03+ AAACCTAAAACTTNTAAAGGCTAATAATTTNTACTTTTCACTACAAGACTACCAAAGCGA
JMFF011B02+ TAATAATTTNTACTTTTCNCTACAAGACTACCAAAGCGA
JMFF043M19+ AAACCTAAAACTTCTAAAGGCTAATAATTTCTACTTTTCACTACAAGACTACCAAAGCGA
____________________________________________________________
consensus AAACCTAAAACTTCTAAAGGCTAATAATTTCTACTTTTCACTACAAGACTACCAAAGCGA
. : . : . : . : . : . :
JMSF048B10+ CCTGATTCCAAACAACCCAAATCAGCATTTCAAATTCCNCAAACTTACCAACCAAACCGG
JMSF025O03+ CCTGATTCCAAACAACCCAAATCAGCATTTCAAATTCCNCAAACTTACCAACCAAACCGG
JMFF011B02+ CCTGATTCCAAACAACCCAAATCAGCATTTCAAATTCCNCAAACTTACCAACCAAACCGG
JMFF043M19+ CCTGATTCCAAACAACCCAAATCAGCATTTCAAATTCCACAAACTTACCAACCAAACCGG
____________________________________________________________
consensus CCTGATTCCAAACAACCCAAATCAGCATTTCAAATTCCACAAACTTACCAACCAAACCGG
. : . : . : . : . : . :
JMSF048B10+ TAAAATACTAAAATCCGCGTGGNGGTAACGAAATCAGGTCAAAATTCGAGCTNTGCNCCT
JMSF025O03+ TAAAATACTAAAATCCGCGTGGTGGTAACGAAATCAGGTCAAAATTCGAGCTNTGCNCCT
JMFF011B02+ TAAAATACTAAAATCCGCGTGGTGGTAACGAAATCAGGTCAAAATTCGAGCTNTGCNCCT
JMFF043M19+ TAAAATACTAAAATCCGCGTGGTGGTAACGAAATCAGGTCAAAATTCGAGCTCTGCACCT
____________________________________________________________
consensus TAAAATACTAAAATCCGCGTGGTGGTAACGAAATCAGGTCAAAATTCGAGCTCTGCACCT
. : . : . : . : . : . :
JMSF048B10+ GATGAATCAACGGATATCCCGTCCGGGTGCCGCAAACCCGTGAACTTTGCCGATTCAACT
JMSF025O03+ GATGAATCAACGGATATCCCGTCCGGGTGCCGCAAACCCGTGAACTTTGCCGATTCAACT
JMFF011B02+ GATGAATCAACGGATATCCCGTCCGGGTGCCGCAAACCCGTGAACTTTGCCGATTCAACT
JMFF043M19+ GATGAATCAACGGATATCCCGTCCGGGTGCCGCAAACCCGTGAACTTTGCCGATTCAACT
____________________________________________________________
consensus GATGAATCAACGGATATCCCGTCCGGGTGCCGCAAACCCGTGAACTTTGCCGATTCAACT
. : . : . : . : . : . :
JMSF048B10+ ATCGTATGAATGTCGAAAATTACAGATTTTAACTAGAAGCTTCCAGAGAAGAAGGAGATG
JMSF025O03+ ATCGTATGAATGTCGAAAATTACAGATTTTAACTAGAAGCTTCCAGAGAAGAAGGAGATG
JMFF011B02+ ATCGTATGAATGTCGAAAATTACAGATTTTAACTAGAAGCTTCCAGAGAAGAAGGAGATG
JMFF043M19+ ATCGTATGAATGTCGAAAATTACAGATTTTAACTAGAAGCTTCCAGAGAAGAAGGAGATG
____________________________________________________________
consensus ATCGTATGAATGTCGAAAATTACAGATTTTAACTAGAAGCTTCCAGAGAAGAAGGAGATG
. : . : . : . : . : . :
JMSF048B10+ TAGAGTTTCCGATAGAGAGAGTATAGAGGGGTTTGAAATGCGTGGNGTAGATATGAAGAT
JMSF025O03+ TAGAGTTTCCGATAGAGAGAGTATAGAGGGGTTCGAAATGCGTGGCGTAGATATGAAGAT
JMFF011B02+ TAGAGTTTCCGATAGAGAGAGTATAGAGGGGTTTGAAATGCGTGGCGTAGATATGAAGAT
JMFF043M19+ TAGAGTTTCCGATAGAGAGAGTATAGAGGGGTTTGAAATGCGTGGCGTAGATATGAAGAT
____________________________________________________________
consensus TAGAGTTTCCGATAGAGAGAGTATAGAGGGGTTTGAAATGCGTGGCGTAGATATGAAGAT
. : . : . : . : . : . :
JMSF048B10+ AAGAACGGGAGAGGTTTCCTCGTCGGGCGAGAGCGAAATTGATTTTTTTTTTTCTGTG
JMSF025O03+ AAGAACGGGAGAGGTTTCCTCGTCGGGCGAGAGCGAAATTGATTTTTTTTTTTCTGTGTG
JMFF011B02+ AAGAACGGGAGAGGTTTCCTCGTCGGGCGAGAGCGAAATTGATTTTTTTTTTTCTGTGTG
JMFF043M19+ AAGAACGGGAGAGGTTTCCTCGTCGGGCGAGAGCGAAATTGATTTTTTTTTTTCTGTGTG
____________________________________________________________
consensus AAGAACGGGAGAGGTTTCCTCGTCGGGCGAGAGCGAAATTGATTTTTTTTTTTCTGTGTG
. : . : . : . : . : . :
JMSF025O03+ AGGATGAAGACGAAGGTACTGGTAGTGGCTAAAATGCGCAGGGTGCGTAGTGCGCA
JMFF011B02+ AGGATGAAGACGAAGGTACTGGTAGTGGCTAAAATGCGCAGGGTGCGTAGTGCGCA
JMFF043M19+ AGGATGAAGACGAAGGTACTGGTAGTGGCTAAAATGCGCAGGGTGCGTAGTGCGCACACT
____________________________________________________________
consensus AGGATGAAGACGAAGGTACTGGTAGTGGCTAAAATGCGCAGGGTGCGTAGTGCGCACACT