Contig 006064:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020K04Sequence511006064 (7)769008317 (7)ref|XP_006365407.1|2e-62PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu
JMFF043B08Sequence631006064 (7)ref|XP_009624184.1|6e-15PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] 649008317 (7)ref|XP_006365407.1|7e-17PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu
JMSF004I20Sequence297006064 (7)202011213 (4)
JMSF012L10Sequence521006064 (7)ref|XP_009624184.1|5e-07PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] 755008317 (7)ref|XP_006365407.1|2e-66PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu
JMSF013O01Sequence360006064 (7)732008317 (7)ref|XP_006365407.1|1e-66PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu
JMSF040O13Sequence531006064 (7)ref|XP_009624184.1|5e-06PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis]
JMSF045L20Sequence686006064 (7)ref|XP_009624184.1|5e-55PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] 702008317 (7)ref|XP_006365407.1|6e-54PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045L20+ TCTCAGAATTCTGGNGGCATCAGAAACATGTTCAAACACATCATTGAT
                      ____________________________________________________________
consensus TCTCAGAATTCTGGNGGCATCAGAAACATGTTCAAACACATCATTGAT
 
. : . : . : . : . : . :
JMSF045L20+ CTTCTTAATTGCAACTCGTTCTCCAGATTGAGTATCAACTGCGGACCCCACAACTCCATA
                      ____________________________________________________________
consensus CTTCTTAATTGCAACTCGTTCTCCAGATTGAGTATCAACTGCGGACCCCACAACTCCATA
 
. : . : . : . : . : . :
JMSF045L20+ GCTACCTTTTCCAATAATTTCTTGAACTTGATACCTACTTGCCTCTCCATACTCCGTAAA
                      ____________________________________________________________
consensus GCTACCTTTTCCAATAATTTCTTGAACTTGATACCTACTTGCCTCTCCATACTCCGTAAA
 
. : . : . : . : . : . :
JMSF045L20+ GAAGTCAGACTCCAGGTTACTCTTTCTGTGAGGATCCATGAAGGAAACTGGGAAATTGAC
                      ____________________________________________________________
consensus GAAGTCAGACTCCAGGTTACTCTTTCTGTGAGGATCCATGAAGGAAACTGGGAAATTGAC
 
. : . : . : . : . : . :
JMSF045L20+ ACGTTTGGGGACCTTGATCGAACTCAGCCCTGAAATATCAAAGTCTTCTACTATTCTAAG
JMSF040O13+ GAAATATCAAAGTNTTNTANTATTNTAAG
JMSF012L10+ AATATCAAAGTCTTCTACTATTNTAAG
JMFF043B08+ GAAATATCAAAGTCTTCTACTATTCTAAG
                      ____________________________________________________________
consensus ACGTTTGGGGACCTTGATCGAACTCAGCCCTGAAATATCAAAGTCTTCTACTATTCTAAG
 
. : . : . : . : . : . :
JMSF045L20+ CTGCTCTTCCTCTACTTCTCCACGGTTTTTGGAATAATTGCTAGAATAATTAGTGGGCTT
JMSF013O01+ TGCTAGAATAATTAGTGGGCTT
JMSF040O13+ NTGCTCTTCCTNTANTTNTCCACGGTTTTNGGAATAANNGNTAGAATAATTAGNGGGCNN
JMSF012L10+ CTGCTCTTCCTCTACTTCTCCACGGTTTTTGGAATAATTGCTAGAATAATTAGTGGGCTT
JMFF020K04+ TTGGAATAATTGCTAGAATAATTAGTGGGCTT
JMFF043B08+ CTGCTCTTCCTCTACTTCTCCACGGTTTTTGGAATAATTGCTAGAATAATTAGTGGGCTT
                      ____________________________________________________________
consensus CTGCTCTTCCTCTACTTCTCCACGGTTTTTGGAATAATTGCTAGAATAATTAGTGGGCTT
 
. : . : . : . : . : . :
JMSF045L20+ GTGAGAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
JMSF013O01+ GTGAGAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
JMSF040O13+ GTGAGAANGGGTCAGAACAGAATCCGCATTTGCGNTAGGAGGAGCAGATGGACGANGATG
JMSF012L10+ GTGAGAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
JMFF020K04+ GTGATAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
JMFF043B08+ GTGATAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
                      ____________________________________________________________
consensus GTGAGAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
 
. : . : . : . : . : . :
JMSF045L20+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
JMSF013O01+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
JMSF040O13+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
JMSF012L10+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
JMFF020K04+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
JMFF043B08+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
                      ____________________________________________________________
consensus GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
 
. : . : . : . : . : . :
JMSF045L20+ TTCTCTTTTCTTTTTTTTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMSF013O01+ TTCTCTTTTCTTTTTTTTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMSF040O13+ TTCTCTTTTCTTTTTTTTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMSF012L10+ TTCTCTTTTCTTTTTTNTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMFF020K04+ TTCTCTTTTCTTTTTTTTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMSF004I20+ TGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMFF043B08+ TTCTCTTTTCTTTTTTNTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
                      ____________________________________________________________
consensus TTCTCTTTTCTTTTTTTTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
 
. : . : . : . : . : . :
JMSF045L20+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMSF013O01+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMSF040O13+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMSF012L10+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMFF020K04+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMSF004I20+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMFF043B08+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
                      ____________________________________________________________
consensus ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
 
. : . : . : . : . : . :
JMSF045L20+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMSF013O01+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMSF040O13+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMSF012L10+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMFF020K04+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMSF004I20+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMFF043B08+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
                      ____________________________________________________________
consensus GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
 
. : . : . : . : . : . :
JMSF045L20+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGA
JMSF013O01+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGAC
JMSF040O13+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGAC
JMSF012L10+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGACATTGACTACCGCGTTAAGGCTAC
JMFF020K04+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGACATTGACTACCGCGTTAAGGCTAC
JMSF004I20+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGACATTGACTACCGCGTTAAGGCTAC
JMFF043B08+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGACATTGACTACCGCGTTAAGGCTAC
                      ____________________________________________________________
consensus AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGACATTGACTACCGCGTTAAGGCTAC
 
. : . : . : . : . : . :
JMSF012L10+ TTCTTTATTATGTCGCATTTCGCAATCGCAGAAAGGATTTTTTTTCCATTCCTATTCCTT
JMFF020K04+ TTCTTTATTATGTCGCATTTCGCAATCGCAGAAAGGATTTTTTTTCCATTCCTATTCCTT
JMSF004I20+ TTCTTTATTATGTCGCATTTCGCAATCGCAGAAAGGATTTTTTTTCCATTCCTATTCCTT
JMFF043B08+ TTCTTTATTATGTCGCATTTCGCAATCGCAGAAAGGATTTTTTTTCCATTCCTATTCCTT
                      ____________________________________________________________
consensus TTCTTTATTATGTCGCATTTCGCAATCGCAGAAAGGATTTTTTTTCCATTCCTATTCCTT
 
. : . : . : . : . : . :
JMSF012L10+ GCCTTCTTCTCAT
JMFF020K04+ GCCTTCTTCTCATAGACGTTACTTTACTTACATTTTATCTAAATATCTATTTCTCAGAC
JMSF004I20+ GCCTTCTTCTCAT
JMFF043B08+ GCCTTCTTCTCATAGACGTTACTTTACTTACATTTTATCTAAATATCTATTTCTCAGACC
                      ____________________________________________________________
consensus GCCTTCTTCTCATAGACGTTACTTTACTTACATTTTATCTAAATATCTATTTCTCAGACC