| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020K04 | Sequence | 511 | 006064 (7) | 769 | 008317 (7) | ref|XP_006365407.1| | 2e-62 | PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu | |||
| JMFF043B08 | Sequence | 631 | 006064 (7) | ref|XP_009624184.1| | 6e-15 | PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] | 649 | 008317 (7) | ref|XP_006365407.1| | 7e-17 | PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu |
| JMSF004I20 | Sequence | 297 | 006064 (7) | 202 | 011213 (4) | ||||||
| JMSF012L10 | Sequence | 521 | 006064 (7) | ref|XP_009624184.1| | 5e-07 | PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] | 755 | 008317 (7) | ref|XP_006365407.1| | 2e-66 | PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu |
| JMSF013O01 | Sequence | 360 | 006064 (7) | 732 | 008317 (7) | ref|XP_006365407.1| | 1e-66 | PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu | |||
| JMSF040O13 | Sequence | 531 | 006064 (7) | ref|XP_009624184.1| | 5e-06 | PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] | |||||
| JMSF045L20 | Sequence | 686 | 006064 (7) | ref|XP_009624184.1| | 5e-55 | PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis] | 702 | 008317 (7) | ref|XP_006365407.1| | 6e-54 | PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Solanum tuberosu |
This contig is upended
. : . : . : . : . : . :
JMSF045L20+ TCTCAGAATTCTGGNGGCATCAGAAACATGTTCAAACACATCATTGAT
____________________________________________________________
consensus TCTCAGAATTCTGGNGGCATCAGAAACATGTTCAAACACATCATTGAT
. : . : . : . : . : . :
JMSF045L20+ CTTCTTAATTGCAACTCGTTCTCCAGATTGAGTATCAACTGCGGACCCCACAACTCCATA
____________________________________________________________
consensus CTTCTTAATTGCAACTCGTTCTCCAGATTGAGTATCAACTGCGGACCCCACAACTCCATA
. : . : . : . : . : . :
JMSF045L20+ GCTACCTTTTCCAATAATTTCTTGAACTTGATACCTACTTGCCTCTCCATACTCCGTAAA
____________________________________________________________
consensus GCTACCTTTTCCAATAATTTCTTGAACTTGATACCTACTTGCCTCTCCATACTCCGTAAA
. : . : . : . : . : . :
JMSF045L20+ GAAGTCAGACTCCAGGTTACTCTTTCTGTGAGGATCCATGAAGGAAACTGGGAAATTGAC
____________________________________________________________
consensus GAAGTCAGACTCCAGGTTACTCTTTCTGTGAGGATCCATGAAGGAAACTGGGAAATTGAC
. : . : . : . : . : . :
JMSF045L20+ ACGTTTGGGGACCTTGATCGAACTCAGCCCTGAAATATCAAAGTCTTCTACTATTCTAAG
JMSF040O13+ GAAATATCAAAGTNTTNTANTATTNTAAG
JMSF012L10+ AATATCAAAGTCTTCTACTATTNTAAG
JMFF043B08+ GAAATATCAAAGTCTTCTACTATTCTAAG
____________________________________________________________
consensus ACGTTTGGGGACCTTGATCGAACTCAGCCCTGAAATATCAAAGTCTTCTACTATTCTAAG
. : . : . : . : . : . :
JMSF045L20+ CTGCTCTTCCTCTACTTCTCCACGGTTTTTGGAATAATTGCTAGAATAATTAGTGGGCTT
JMSF013O01+ TGCTAGAATAATTAGTGGGCTT
JMSF040O13+ NTGCTCTTCCTNTANTTNTCCACGGTTTTNGGAATAANNGNTAGAATAATTAGNGGGCNN
JMSF012L10+ CTGCTCTTCCTCTACTTCTCCACGGTTTTTGGAATAATTGCTAGAATAATTAGTGGGCTT
JMFF020K04+ TTGGAATAATTGCTAGAATAATTAGTGGGCTT
JMFF043B08+ CTGCTCTTCCTCTACTTCTCCACGGTTTTTGGAATAATTGCTAGAATAATTAGTGGGCTT
____________________________________________________________
consensus CTGCTCTTCCTCTACTTCTCCACGGTTTTTGGAATAATTGCTAGAATAATTAGTGGGCTT
. : . : . : . : . : . :
JMSF045L20+ GTGAGAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
JMSF013O01+ GTGAGAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
JMSF040O13+ GTGAGAANGGGTCAGAACAGAATCCGCATTTGCGNTAGGAGGAGCAGATGGACGANGATG
JMSF012L10+ GTGAGAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
JMFF020K04+ GTGATAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
JMFF043B08+ GTGATAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
____________________________________________________________
consensus GTGAGAATGGGTCAGAACAGAATCCGCATTTGCGCTAGGAGGAGCAGATGGACGACGATG
. : . : . : . : . : . :
JMSF045L20+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
JMSF013O01+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
JMSF040O13+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
JMSF012L10+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
JMFF020K04+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
JMFF043B08+ GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
____________________________________________________________
consensus GAACCAGCGAAGAACACCATCCACAAATGCATTCCCACCCCCCATATACTACTTTAGTGC
. : . : . : . : . : . :
JMSF045L20+ TTCTCTTTTCTTTTTTTTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMSF013O01+ TTCTCTTTTCTTTTTTTTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMSF040O13+ TTCTCTTTTCTTTTTTTTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMSF012L10+ TTCTCTTTTCTTTTTTNTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMFF020K04+ TTCTCTTTTCTTTTTTTTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMSF004I20+ TGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
JMFF043B08+ TTCTCTTTTCTTTTTTNTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
____________________________________________________________
consensus TTCTCTTTTCTTTTTTTTGCGTCGTTCCTATTCCTATCCCTCCCCTAAACTCTCGATCCA
. : . : . : . : . : . :
JMSF045L20+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMSF013O01+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMSF040O13+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMSF012L10+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMFF020K04+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMSF004I20+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
JMFF043B08+ ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
____________________________________________________________
consensus ATTCCTGATTCTCTACCACTCGATCTCAGCTCTCTCTCTCTCTCTCTCTCTTCGTGCTCC
. : . : . : . : . : . :
JMSF045L20+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMSF013O01+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMSF040O13+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMSF012L10+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMFF020K04+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMSF004I20+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
JMFF043B08+ GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
____________________________________________________________
consensus GAACCTTTCTTCCGATTCTCTCTCAATCGATGAAGGGCGACAAGGAAGATCGAGGGTGAG
. : . : . : . : . : . :
JMSF045L20+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGA
JMSF013O01+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGAC
JMSF040O13+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGAC
JMSF012L10+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGACATTGACTACCGCGTTAAGGCTAC
JMFF020K04+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGACATTGACTACCGCGTTAAGGCTAC
JMSF004I20+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGACATTGACTACCGCGTTAAGGCTAC
JMFF043B08+ AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGACATTGACTACCGCGTTAAGGCTAC
____________________________________________________________
consensus AAATGCGATTAAAGTATAATAGGAAAGAAGCTTGGACATTGACTACCGCGTTAAGGCTAC
. : . : . : . : . : . :
JMSF012L10+ TTCTTTATTATGTCGCATTTCGCAATCGCAGAAAGGATTTTTTTTCCATTCCTATTCCTT
JMFF020K04+ TTCTTTATTATGTCGCATTTCGCAATCGCAGAAAGGATTTTTTTTCCATTCCTATTCCTT
JMSF004I20+ TTCTTTATTATGTCGCATTTCGCAATCGCAGAAAGGATTTTTTTTCCATTCCTATTCCTT
JMFF043B08+ TTCTTTATTATGTCGCATTTCGCAATCGCAGAAAGGATTTTTTTTCCATTCCTATTCCTT
____________________________________________________________
consensus TTCTTTATTATGTCGCATTTCGCAATCGCAGAAAGGATTTTTTTTCCATTCCTATTCCTT
. : . : . : . : . : . :
JMSF012L10+ GCCTTCTTCTCAT
JMFF020K04+ GCCTTCTTCTCATAGACGTTACTTTACTTACATTTTATCTAAATATCTATTTCTCAGAC
JMSF004I20+ GCCTTCTTCTCAT
JMFF043B08+ GCCTTCTTCTCATAGACGTTACTTTACTTACATTTTATCTAAATATCTATTTCTCAGACC
____________________________________________________________
consensus GCCTTCTTCTCATAGACGTTACTTTACTTACATTTTATCTAAATATCTATTTCTCAGACC