Contig 006063:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012G14Sequence462006063 (14)ref|XP_007163079.1|4e-83hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot487006063 (14)ref|XP_008451555.1|1e-24PREDICTED: 60S ribosomal protein L19-1-like [Cucumis melo]
JMFF017F11Sequence585006063 (14)ref|XP_004489107.1|6e-104PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum]769006063 (14)ref|XP_004489107.1|2e-85PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum]
JMFF036D15Sequence512006063 (14)ref|XP_007163079.1|2e-99hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot716006063 (14)ref|XP_004489107.1|3e-72PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum]
JMFF042O06Sequence642006063 (14)ref|XP_010069890.1|4e-109PREDICTED: 60S ribosomal protein L19-1 [Eucalyptus grandis] gb|KCW58397.1| hypot607006063 (14)ref|XP_004489107.1|7e-60PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum]
JMFF051O24Sequence561006063 (14)ref|XP_004489107.1|2e-107PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum]614006063 (14)ref|XP_004489107.1|6e-62PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum]
JMFN002A11Sequence537006063 (14)ref|XP_010069890.1|2e-105PREDICTED: 60S ribosomal protein L19-1 [Eucalyptus grandis] gb|KCW58397.1| hypot
JMFN042G17Sequence616006063 (14)ref|XP_008451555.1|1e-53PREDICTED: 60S ribosomal protein L19-1-like [Cucumis melo]
JMFS019D01Sequence423006063 (14)ref|XP_007163079.1|1e-79hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot
JMSF041F02Sequence757016849ref|XP_006342260.1|1e-133PREDICTED: centromere/kinetochore protein zw10 homolog isoform X2 [Solanum tube632006063 (14)ref|XP_004489107.1|5e-76PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum]

Alignment

This contig is upended


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rJMFF042O06-                                                           CCCCTTAACTA
rJMFF012G14-                                                           CCCCTTAACTA
rJMFF036D15-                                                           CCCCTTAACTA
rJMSF041F02-                    AATAGCATAAATAAAAAGTACAGGCAGGTAAAAAACTTACCCCTTAACTA
                      ____________________________________________________________
consensus                       AATAGCATAAATAAAAAGTACAGGCAGGTAAAAAACTTACCCCTTAACTA
 
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rJMFF042O06-          TAAAGGTATAGCACCAGGG-AGGGGGTAGGTAGGGGTGGCGGGCAGGGAGCCAAAAACCT
rJMFF012G14-          TAAAGGTATAGCACCAGGG-AGGGGGTANGTANGGGTGGCGGGCAGGGAGCCAAAAAACT
rJMFF036D15-          TAAAGGTATAGCACCAGGG-AGGGGGTAGGTAGGGGTGGCGGGCAGGGAGCCAAAAACCT
rJMSF041F02-          TAAAGGTATAGCACCAGGGTAGGGGGTAGGTAGGGGTGGCGGGCAGGGAGCCAAAAACCT
                      ____________________________________________________________
consensus             TAAAGGTATAGCACCAGGG-AGGGGGTAGGTAGGGGTGGCGGGCAGGGAGCCAAAAACCT
 
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JMFN042G17-                                                      ATCTTCACAGGTTTCAC
rJMFF042O06-          TAACTATAAATTCTAACACAAAAACTTAGAAAGAGCCACCACTATCTTCACAGGTTTCAC
rJMFF012G14-          TAACTATAAATTCTAACACAAAAACTTANAAAGAGCCACCACTATCTTCACAGGTTTCAC
rJMFF036D15-          TAACTATAAATTCTAACACAAAAACTTAGAAAGAGCCACCACTATCTTCACAGGTTTCAC
rJMSF041F02-          TAACTATAAATTCTAACACANAAACTTAGAAAGAGCCACCACTATCTTCACAGGTTTCAC
rJMFF051O24-                                                     ATCTTCATAGGTTTCAC
rJMFF017F11-                                                     ATCTTCATAGGTTTCAC
                      ____________________________________________________________
consensus             TAACTATAAATTCTAACACAAAAACTTAGAAAGAGCCACCACTATCTTCACAGGTTTCAC
 
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JMFN042G17-           TTCTTTGATTTTTTAGACACCTGCGTTGGCTGGGATTGGGTTACCGGTGCAGGTGCTTCC
rJMFF042O06-          TTCTTTGATTTTTTAGACACCTGCGTTGGCTGGGATTGGGTTACCGGTGCAGGTGCTTCC
rJMFF012G14-          TTCTTTGATTTTTTAGACACCTGCGTTGGCTGGGATTGGGTTACCGGTGCAGGTGCTTCC
rJMFF036D15-          TTCTTTGATTTTTTAGACACCTGCGTTGGCTGGGATTGGGTTACCGGTGCAGGTGCTTCC
rJMSF041F02-          TTCTTTGATTTTTTAGACACCTGCGTTGGCTGGGATTGGGTTACCGGTGCAGGTGCTTCC
rJMFF051O24-          TTCTTCAATTTTTTAGACACCTGCGCTTGCTGGGATTGGGTTACCGGTGCAGGCGCTTCT
rJMFF017F11-          TTCTTCAATTTTTTAGACACCTGCGCTTGCTGGGATTGGGTTACCGGTGCAGGTGCTTCT
                      ____________________________________________________________
consensus             TTCTTTGATTTTTTAGACACCTGCGTTGGCTGGGATTGGGTTACCGGTGCAGGTGCTTCC
 
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JMFN042G17-           CTCTCTCCTGGACCCTTGGCCAAGCGCTCCTCTCTCCTGGCAAACTTTCTTTCACGGCTT
rJMFF042O06-          CTCTCTCCTGGACCCTTGGCCAAGCGCTCCTCTCTCCTGGCAAACTTTCTTTCACGGCTT
rJMFF012G14-          CTCTCTCCTGGACCCTTGGCCAAGCGCTCCTCTCTCCTGGCAAACTTTCTTTCACGGCTT
rJMFF036D15-          CTCTCTCCTGGACCCTTGGCCAAGCGCTCCTCTCTCCTGGCAAACTTTCTTTCACGGCTT
rJMSF041F02-          CTCTCTCCTGGACCCTTGGCCAAGCGCTCCTCTCTCCTGGCAAACTTTCTTTCACGGCTT
rJMFF051O24-          TGCTCTCCTGGACCCTTGGCCAATCGCTCCTCTCGCCTGGCAAACTTTCTTTCACGGCTT
rJMFF017F11-          CGCTCTCCTGGACCCTTGGCCAATCGCTCCTCTCGCCTGGCAAACTTTCTTTCACGGCTT
JMFN002A11+                                                TGGCAAACTTTCTTTCACGGCTT
JMFF017F11+                                                   CAAACTTTCTTTCACGGCTT
JMFF051O24+                                            CGCCTGGCAAACTTTCTTTCACGGCTT
JMFF042O06+                             GCCAAGCGCTCCTCTCTCCTGGCAAACTTTCTTTCACGGCTT
                      ____________________________________________________________
consensus             CTCTCTCCTGGACCCTTGGCCAAGCGCTCCTCTCTCCTGGCAAACTTTCTTTCACGGCTT
 
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JMFN042G17-           GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
rJMFF042O06-          GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
rJMFF012G14-          GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
rJMFF036D15-          GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
rJMSF041F02-          GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
rJMFF051O24-          GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
rJMFF017F11-          GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
JMFN002A11+           GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
JMFF036D15+                                 CCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
JMFF017F11+           GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
JMFF051O24+           GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
JMFS019D01+                                               GATAATGTCTTTTCTGTAGCCTTC
JMFF042O06+           GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
                      ____________________________________________________________
consensus             GCCTTGTTCTTTGCCCTCTTAGCCTCAAACTGATCTGATAATGTCTTTTCTCTAGCCTTC
 
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JMFN042G17-           TCAGCCTTTGATTTGTGAATACTCTCCATCAGGACACGCTTGTTCTTGAAAACATTACCC
rJMFF042O06-          TCAGCCTTTGATTTGTGAATACTCTCCATCAGGACACGCTTGTTCTTGAAAACATTACCC
rJMFF012G14-          TCANCCTTCGATTTGTGAATACTCTCCATCA                             
rJMFF036D15-          TCAGCCTTTGATTTGTGAATACTCTCCATCAGGACACGCTTGTTCTTGAAAACATTACCC
rJMSF041F02-          TCAGCCTTTGATTTGTGAATACTCTCCATCAGGACACGCTTGTTCTTGAAAACATTACCC
rJMFF051O24-          TCAGCCTTTGATTTGTGAATACTCTCCATCAGCACACGTTTGTTCTTGAAAACATTACCC
rJMFF017F11-          TCAGCCTTTGATTTGTGAATACTCTCCATCAGCACACGTTTGTTCTTGAAAACATTACCC
JMFN002A11+           TCAGCCTTTGATTTGTGAATACTCTCCATCAGGACACGCTTGTTCTTGAAAACATTACCC
JMFF036D15+           TCAGCCTTTGATTTGTGAATACTCTCCATCAGGACACGCTTGTTCTTGAAAACATTACCC
JMFF017F11+           TCAGCCTTTGATTTGTGAATACTCTCCATCAGCACACGTTTGTTCTTGAAAACATTACCC
JMFF051O24+           TCAGCCTTTGATTTGTGAATACTCTCCATCAGCACACGTTTGTTCTTGAAAACATTACCC
JMFF012G14+                       TTGTGAATACTCTCCATCAGGACACGCTTGTTCTTGAAAACATTACCC
JMFS019D01+           TCAGCCTTTGATTTGTGAATACTCTCCATCAGGACACGCTTGTTCTTGAAAACATTACCC
JMFF042O06+           TCAGCCTTTGATTTGTGAATACTCTCCATCAGGACACGCTTGTTCTTGAAAACATTACCC
                      ____________________________________________________________
consensus             TCAGCCTTTGATTTGTGAATACTCTCCATCAGGACACGCTTGTTCTTGAAAACATTACCC
 
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JMFN042G17-           TTCACTTTCATGTACATGTCATGATACATGTGCTTATCAATCTTCTTTGACTCGCTATAC
rJMFF042O06-          TTCACTTTCATGTACATGTCATGATACATGTGCTTATCAATCTTCTTTGACTCGCTATAC
rJMFF036D15-          TTCACTTTCATGTACATGTCATGATACATGTGCTTATCAATCTTCTTTGACTCGCTATAC
rJMSF041F02-          TTCACTTTCATGTACATGTCATGATACATGTGCTTATCAATCTTCTTTGACTCGCTATAC
rJMFF051O24-          TTCACTTTCATGTACATGTCATGATACATGTGCTTGTCAATCTTCTTTGACTCCCTGTAC
rJMFF017F11-          TTCACTTTCATGTACATGTCATGATACATGTGCTTGTCAATCTTCTTTGACTCCCTGTAC
JMFN002A11+           TTCACTTTCATGTACATGTCATGATACATGTGCTTATCAATCTTCTTTGACTCGCTATAC
JMFF036D15+           TTCACTTTCATGTACATGTCATGATACATGTGCTTATCAATCTTCTTTGACTCGCTATAC
JMFF017F11+           TTCACTTTCATGTACATGTCATGATACATGTGCTTGTCAATCTTCTTTGACTCCCTGTAC
JMFF051O24+           TTCACTTTCATGTACATGTCATGATACATGTGCTTGTCAATCTTCTTTGACTCCCTGTAC
JMFF012G14+           TTCACTTTCATGTACATGTCATGATACATGTGCTTATCAATCTTCTTTGACTCGCTATAC
JMFS019D01+           TTCACTTTCATGTACATGTCATGATACATGTGCTTATCAATCTTCTTTGACTCGCTATAC
JMFF042O06+           TTCACTTTCATGTACATGTCATGATACATGTGCTTATCAATCTTCTTTGACTCGCTATAC
                      ____________________________________________________________
consensus             TTCACTTTCATGTACATGTCATGATACATGTGCTTATCAATCTTCTTTGACTCGCTATAC
 
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JMFN042G17-           TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
rJMFF042O06-          TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
rJMFF036D15-          TTGCGAAGCAGGCGCCTGAGGACCATCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
rJMSF041F02-          TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
rJMFF051O24-          TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCNCAAGCACTTTAGTGGGTAAC
rJMFF017F11-          TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
JMFN002A11+           TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
JMFF036D15+           TTGCGAAGCAGGCGCCTGAGGACCATCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
JMFF017F11+           TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
JMFF051O24+           TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
JMFF012G14+           TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
JMFS019D01+           TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
JMFF042O06+           TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
                      ____________________________________________________________
consensus             TTGCGAAGCAGGCGCCTGAGGACCCTCATTCTCCTCATCCAAAGCACTTTAGTGGGTAAC
 
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JMFN042G17-           CTAGCCTCCCT                                                 
rJMFF042O06-          CTAGCCTCCCTAGTACCCTTGCGCTTACCATATCCA                        
rJMFF036D15-          CTAGCCTCCCTAGTACCCTTGCGCTTACCATATCCAGAGTGACGGCCCTTTCTCTTAGCC
rJMSF041F02-          CTAGCCTCCCTAGTACCCTTGCGCTTACCATATCCAGAGTGACGGCCCTTTCTCTTAGCC
rJMFF051O24-          CTAGCCTCCCTAGTACCCTTGCGCTTACCATATCCAGAGTGACG                
rJMFF017F11-          CTAGCCTCCCTAGTACCCTTGCGCTTACCATTTCCAGAGTGACGGCCCTTCCTCTTAGCC
JMFN002A11+           CTAGCCTCCCTAGTACCCTTGCGCTTACCATATCCAGAGTGACGGCCCTTTCTCTTAGCC
JMFF036D15+           CTAGCCTCCCTAGTACCCTTGCGCTTACCATATCCAGAGTGACGGCCCTTTCTCTTAGCC
JMFF017F11+           CTAGCCTCCCTAGTACCCTTGCGCTTACCATTTCCAGAGTGACGGCCCTTCCTCTTAGCC
JMFF051O24+           CTAGCCTCCCTAGTACCCTTGCGCTTACCATATCCAGAGTGACGGCCCTTCCTCTTAGCC
JMFF012G14+           CTAGCCTCCCTAGTACCCTTGCGCTTACCATATCCAGAGTGACGGCCCTTTCTCTTAGCC
JMFS019D01+           CTAGCCTCCCTAGTACCCTTGCGCTTACCATATCCAGAGTGACGGCCCTTTCTCTTAGCC
JMFF042O06+           CTAGCCTCCCTAGTACCCTTGCGCTTACCATATCCAGAGTGACGGCCCTTTCTCTTAGCC
                      ____________________________________________________________
consensus             CTAGCCTCCCTAGTACCCTTGCGCTTACCATATCCAGAGTGACGGCCCTTTCTCTTAGCC
 
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rJMFF036D15-          TCCTTCATTCGGCGA                                             
rJMSF041F02-          TCCTTCATTCGGCGAGCACGAGATCTTGAGTGAATCTTGGTA                  
rJMFF017F11-          TCCTTCATTCGGCGAGCACGAGACCTTGAGTGAATCTTGGTAGGCTTTCTGATAATGAAG
JMFN002A11+           TCCTTCATTCGGCGAGCACGAGATCTTGAGTGAATCTTGGTAGGCTTTCTGATAATGAAG
JMFF036D15+           TCCTTCATTCGGCGAGCACGAGATCTTGAGTGAATCTTGGTAGGCTTTCTGATAATGAAG
JMFF017F11+           TCCTTCATTCGGCGAGCACGAGACCTTGAGTGAATCTTGGTAGGCTTTCTGATAATGAAG
JMFF051O24+           TCCTTCATTCGGCGAGCACGAGACCTTGAGTGAATCTTGGTAGGCTTTCTGATAATGAAG
JMFF012G14+           TCCTTCATTCGGCGAGCACGAGATCTTGAGTGAATCTTGGTAGGCTTTCTGATAATGAAG
JMFS019D01+           TCCTTCATTCGGCGAGCACGAGATCTTGAGTGAATCTTGGTAGGCTTTCTGATAATGAAG
JMFF042O06+           TCCTTCATTCGGCGAGCACGAGATCTTGAGTGAATCTTGGTAGGCTTTCTGATAATGAAG
                      ____________________________________________________________
consensus             TCCTTCATTCGGCGAGCACGAGATCTTGAGTGAATCTTGGTAGGCTTTCTGATAATGAAG
 
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rJMFF017F11-          CCATCCTTCACCAGCTTCCTTATGTTC                                 
JMFN002A11+           CCATCCTTCACCAGCTTCCTTATGTTCTGGCGAGAATTGGCCATGGAGATTTCATTGCCT
JMFF036D15+           CCATCCTTCACCAGCTTCCTTATGTTCTGGCGAGAATTGGCCATGGAGATTTCATTGCCT
JMFF017F11+           CCATCCTTCACCAGCTTCCTTATGTTCTGGCGAGAGTTGGCCATGGAGATTTCATTGACT
JMFF051O24+           CCATCCTTCACCAGCTTCCTTATGTTCTGGCGAGAGTTGGCCATGGAGATTTCATTGACT
JMFF012G14+           CCATCCTTCACCAGCTTCCTTATGTTCTGGCGAGAATTGGCCATGGAGATTTCATTGCCT
JMFS019D01+           CCATCCTTCACCAGCTTCCTTATGTTCTGGCGAGAATTGGCCATGGAGATTTCATTGCCT
JMFF042O06+           CCATCCTTCACCAGCTTCCTTATGTTCTGGCGAGAATTGGCCATGGAGATTTCATTGCCT
                      ____________________________________________________________
consensus             CCATCCTTCACCAGCTTCCTTATGTTCTGGCGAGAATTGGCCATGGAGATTTCATTGCCT
 
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JMFN002A11+           TCGTTGGGATCGAGCCAAACCTTTCCCCGCCCACACTTCAGCACACTGGCTGCAAGCCTC
JMFF036D15+           TCGTTGGGATCGAGCCAAACCTTTCCCCGCCCACACTTCAGCACACTGGCTGCAAGCCTC
JMFF017F11+           TCATTGGGATCGAGCCAGACCTTTCCCCGCCCGCACTTCAGCACACTGGCTGAAAGCCTC
JMFF051O24+           TCATTGGGATCGAGCCAGACCTTTCCCCGCCCGCACTTCAGCACACTGGCTGAAAGCCTC
JMFF012G14+           TCGTTGGGATCGAGCCAAACCTTCCCCCGCCCACACTTCAGCACACTGGCTGCAAGCCTC
JMFS019D01+           TCGTTGGGATCGAGCCAAACCTTTCCCCGCCCACACTTC                     
JMFF042O06+           TCGTTGGGATCGAGCCAAACCTTTCCCCGCCCACACTTCAGCACACTGGCTGCAAGCCTC
                      ____________________________________________________________
consensus             TCGTTGGGATCGAGCCAAACCTTTCCCCGCCCACACTTCAGCACACTGGCTGCAAGCCTC
 
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JMFN002A11+           TTCTGTAACTTCAACGACACCATCTTTGGTTCGG                          
JMFF036D15+           TTCTGTAACTTCAACGACACCATCTTTGGTTC                            
JMFF017F11+           TTCTGTAACTTCAAGGATACCATCTTTGGTTC                            
JMFF051O24+           TTCTGTAACTTCAAGGATACCATCTTTGGTTC                            
JMFF012G14+           TTCTGTAACTTCAACGACACCATCTTTGGTTC                            
JMFF042O06+           TTCTGTAACTTCAACGACACCATCTTTGGTTCGGCTCTCGTCTCTCTCAGATGCAATTGA
                      ____________________________________________________________
consensus             TTCTGTAACTTCAACGACACCATCTTTGGTTCGGCTCTCGTCTCTCTCAGATGCAATTGA
 
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JMFF042O06+           TTGATGGATGAAGATAGTGCTATTATATCACAGCTACCCTAGGGTTTTGAAAAAGTTATA
                      ____________________________________________________________
consensus             TTGATGGATGAAGATAGTGCTATTATATCACAGCTACCCTAGGGTTTTGAAAAAGTTATA