Contig 006062:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037H09Sequence568006062 (5)ref|XP_009783268.1|9e-61PREDICTED: proteasome subunit beta type-6-like [Nicotiana sylvestris]
JMFF042N19Sequence639006062 (5)ref|XP_010048490.1|4e-111PREDICTED: proteasome subunit beta type-6 [Eucalyptus grandis] gb|KCW80737.1| hy
JMSF049O24Sequence699006062 (5)ref|XP_010048490.1|9e-129PREDICTED: proteasome subunit beta type-6 [Eucalyptus grandis] gb|KCW80737.1| hy680006062 (5)emb|CDP12496.1|1e-96unnamed protein product [Coffea canephora]
JMSF052P11Sequence647006062 (5)ref|XP_010048490.1|2e-116PREDICTED: proteasome subunit beta type-6 [Eucalyptus grandis] gb|KCW80737.1| hy

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF049O24- ATTTTTCCATTCCCATGGTCTTAACAAAACTAGT
                      ____________________________________________________________
consensus ATTTTTCCATTCCCATGGTCTTAACAAAACTAGT
 
. : . : . : . : . : . :
rJMSF049O24- AATAGCAGACTAAATAAGCCTTTTTAATATGCTTCCAACCAAACATAACAAGGGCGTTTT
                      ____________________________________________________________
consensus AATAGCAGACTAAATAAGCCTTTTTAATATGCTTCCAACCAAACATAACAAGGGCGTTTT
 
. : . : . : . : . : . :
rJMSF049O24- AAATAAGCCTTAACTTAATAGTTCTTATAAAAGGAAAAAGAGTTTTTTGAAGAAGTTTCT
                      ____________________________________________________________
consensus AAATAAGCCTTAACTTAATAGTTCTTATAAAAGGAAAAAGAGTTTTTTGAAGAAGTTTCT
 
. : . : . : . : . : . :
rJMSF049O24- CTTGGGCCAAACAAGTGCTAGAACCAATGCTCCTTTCTCAAATCTCAACTGACCATCGGC
                      ____________________________________________________________
consensus CTTGGGCCAAACAAGTGCTAGAACCAATGCTCCTTTCTCAAATCTCAACTGACCATCGGC
 
. : . : . : . : . : . :
rJMSF049O24- TCGGGACTGCTGGTTTGCAAAATGTCCAGAAGTGAATTGTGTGCCTCCATCTCGTCGTGC
                      ____________________________________________________________
consensus TCGGGACTGCTGGTTTGCAAAATGTCCAGAAGTGAATTGTGTGCCTCCATCTCGTCGTGC
 
. : . : . : . : . : . :
rJMSF049O24- CATATTGGAAGGGTGTCGCCTGGGTAAAATTTCCTAGTTACCCCTTCCGAGTTAATAGTA
JMSF049O24+ CCTTCCGAGTTAATAGTA
                      ____________________________________________________________
consensus CATATTGGAAGGGTGTCGCCTGGGTAAAATTTCCTAGTTACCCCTTCCGAGTTAATAGTA
 
. : . : . : . : . : . :
rJMSF049O24- ACAGTCCGAACTACGCCACCACTGGCACCATCCCGCGCAATGGCAAGAGACACTGCCTTG
JMSF052P11+ TACGCCACCACTGGCACCATCCCGCGCAATGGCAAGAGACACTGCCTTG
JMSF049O24+ ACAGTCCGAATTACGCCACCACTGGCACCATCCCGCGCAATGGCAAGAGACACTGCCTTG
JMFF042N19+ CTGGCACCATCCCGCGCAATGGCAAGAGACACTGCCTTG
                      ____________________________________________________________
consensus ACAGTCCGAATTACGCCACCACTGGCACCATCCCGCGCAATGGCAAGAGACACTGCCTTG
 
. : . : . : . : . : . :
rJMSF049O24- ACCACAAATTTCTCAGCTTCTTCTTGGGTCATTCCTTCCTTCCATGCTTGGTCAAAGAAA
JMSF052P11+ ACCACAAATTTCTCAGCTTCTTCTTGGGTCATTCCTTCCTTCCATGCTTGGTCAAAGAAA
JMSF049O24+ ACCACAAATTTCTCAGCTTCTTCTTGGGTCATTCCTTCCTTCCATGCTTGGTCAAAGAAA
JMFF042N19+ ACCACAAATTTCTCAGCTTCTTCTGGGTCNATTCCTTCCTTCCATGCTTGGTCAAAGAAA
                      ____________________________________________________________
consensus ACCACAAATTTCTCAGCTTCTTCTTGGGTCATTCCTTCCTTCCATGCTTGGTCAAAGAAA
 
. : . : . : . : . : . :
rJMSF049O24- CCATATAAATAAGAAGATCCTGATCCTCCAATAGCAAAAGGCTGCTCCAATATTGTGCCT
JMSF052P11+ CCATATAAATAAGAAGATCCTGATCCTCCAATAGCAAAAGGCTGCTCCAATATTGTGCCT
JMSF049O24+ CCATATAAATAAGAAGATCCTGATCCTCCAATAGCAAAAGGCTGCTCCAATATTGTGCCT
JMFF042N19+ CCATATAAATAAGAAGATCCTGATCCTCCAATAGCAAAAGGCTGCTCCAATATTGTGCCT
                      ____________________________________________________________
consensus CCATATAAATAAGAAGATCCTGATCCTCCAATAGCAAAAGGCTGCTCCAATATTGTGCCT
 
. : . : . : . : . : . :
rJMSF049O24- CCAAGGGGTACCCCATATATTTTACCTCCTTCATGTTTGTCCCAGCCACCAACAATAAGC
JMSF052P11+ CCAAGGGGTACCCCATATATTTTACCTCCTTCATGTTTGTCCCAGCCACCAACAATAAGC
JMSF049O24+ CCAAGGGGTACCCCATATATTTTACCTCCTTCATGTTTGTCCCAGCCACCAACAATAAGC
JMFF042N19+ CCAAGGGGTACCCCATATATTTTACCTCCTTCATGTTTGTCCCAGCCACCAACAATAAGC
                      ____________________________________________________________
consensus CCAAGGGGTACCCCATATATTTTACCTCCTTCATGTTTGTCCCAGCCACCAACAATAAGC
 
. : . : . : . : . : . :
rJMSF049O24- CCAGTTTGAAGCATATTCTTGTTATTGTAGGCTAATAATCTGACAAGGTTTGCTGCAACC
JMSF052P11+ CCAGTTTGAAGCATATTCTTGTTATTGTAGGCTAATAATCTGACAAGGTTTGCTGCAACC
JMSF049O24+ CCAGTTTGAAGCATATTCTTGTTATTGTAGGCTAATAATCTGACAAGGTTTGCTGCAACC
JMFF037H09+ CTTGTTATTGTAGGCTAATAATCTGACAAGGTTTGCTGCAACC
JMFF042N19+ CCAGTTTGAAGCATATTCTTGTTATTGTAGGCTAATAATCTGACAAGGTTTGCTGCAACC
                      ____________________________________________________________
consensus CCAGTTTGAAGCATATTCTTGTTATTGTAGGCTAATAATCTGACAAGGTTTGCTGCAACC
 
. : . : . : . : . : . :
rJMSF049O24- TTAACAGTTGTTGGCTGCCCAAGCTGTATCGTGTGTTGGTGTAGAA
JMSF052P11+ TTAACAGTTGTTGGCTGCCCAAGCTGTATCGTGTGTTGGTGTAGAAAATAGCGAACATAG
JMSF049O24+ TTAACAGTTGTTGGCTGCCCAAGCTGTATCGTGTGTTGGTGTAGAAAATAGCGAACATAG
JMFF037H09+ TTAACAGTTGTTGGCTGCCCAAGCTGTATCGTGTGTTGGTGTAGAAAATAGCGAACATAG
JMFF042N19+ TTAACAGTTGTTGGCTGCCCAAGCTGTATCGTGTGTTGGTGTAGAAAATAGCGAACATAG
                      ____________________________________________________________
consensus TTAACAGTTGTTGGCTGCCCAAGCTGTATCGTGTGTTGGTGTAGAAAATAGCGAACATAG
 
. : . : . : . : . : . :
JMSF052P11+ TCTGAAACAATTTGCGAATCTGCTGCCGAACCCGAACGACACACGTAGACATTATCAGTG
JMSF049O24+ TCTGAAACAATTTGCGAATCTGCTGCCGAACCCGAACGACACACGTAGACATTATCAGTG
JMFF037H09+ TCTGAAACAATTTGCGAATCTGCTGCCGAACCCGAACGACACACGTAGACATTATCAGTG
JMFF042N19+ TCTGAAACAATTTGCGAATCTGCTGCCGAACCCGAACGACACACGTAGACATTATCAGTG
                      ____________________________________________________________
consensus TCTGAAACAATTTGCGAATCTGCTGCCGAACCCGAACGACACACGTAGACATTATCAGTG
 
. : . : . : . : . : . :
JMSF052P11+ AGCTTAGTGATCTTATCTGAGGCCCTATTAGCCACATACATTCCTGTACTGGTTCGAGAA
JMSF049O24+ AGCTTAGTGATCTTATCTGAGGCCCTATTAGCCACATACATTCCTGTACTGGTTCGAGAA
JMFF037H09+ AGCTTAGTGATCTTATCTGAGGCCCTATTAGCCACATACATTCCTGTACTGGTTCGAGAA
JMFF042N19+ AGCTTAGTGATCTTATCTGAGGCCCTATTAGCCACATACATTCCTGTACTGGTTCGAGAA
                      ____________________________________________________________
consensus AGCTTAGTGATCTTATCTGAGGCCCTATTAGCCACATACATTCCTGTACTGGTTCGAGAA
 
. : . : . : . : . : . :
JMSF052P11+ TCGGCGCCGAGAACGACGCCGCCGTTGTAAGTGACGCCGATGATGGTGGTCCCCATCGAG
JMSF049O24+ TCGGCGCCGAGAACGACGCCGCCGTTGTAAGTGACGCCGATGATGGTGGTCCCCATCGAG
JMFF037H09+ TCGGCGCCGAGAACGACGCCGCCGTTGTAAGTGACGCCGATGATGGTGGTCCCCATCGAG
JMFF042N19+ TCGGCGCCGAGAACGACGCCGCCGTTGTAAGTGACGCCGATGATGGTGGTCCCCATCGAG
                      ____________________________________________________________
consensus TCGGCGCCGAGAACGACGCCGCCGTTGTAAGTGACGCCGATGATGGTGGTCCCCATCGAG
 
. : . : . : . : . : . :
JMSF052P11+ TGAGGTGAATCCAAATCGTTGAGCAAATTCGCGTCCATTTTTAAGGTTTAGGTTAACTTC
JMSF049O24+ TGAGGTGAATCCAAATCGTTGAGCAAATTCGCGTCCATTTTTAAGGTTTAGGTTAACTTC
JMFF037H09+ TGAGGTGAATCCAAATCGTTGAGCAAATTCGCGTCCATTTTTAAGGTTTAGGTTAACTTC
JMFF042N19+ TGAGGTGAATCCAAATCGTTGAGCAAATTCGCGTCCATTTTTAAGGTTTAGGTTAACTTC
                      ____________________________________________________________
consensus TGAGGTGAATCCAAATCGTTGAGCAAATTCGCGTCCATTTTTAAGGTTTAGGTTAACTTC
 
. : . : . : . : . : . :
JMSF052P11+ GCAGATGAAAATAAGAGAGGATTGATCGAACTTACAATTGGATGTTAGTTAAAAAC
JMSF049O24+ GCAGATGAAAATAAGAGAGGATTGATCGAACTTACAATTGGATGTTAGTTAAAAAC
JMFF037H09+ GCAGATGAAAATAAGAGAGGATTGATCGAACTTACAATTGGATGTTAGTTAAAAAC
JMFF042N19+ GCAGATGAAAATAAGAGAGGATTGATCGAACTTACAATTGGATGTTAGTTAAAAACCCGG
                      ____________________________________________________________
consensus GCAGATGAAAATAAGAGAGGATTGATCGAACTTACAATTGGATGTTAGTTAAAAACCCGG