Contig 006058:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF035I08+                                                         CTTGCGGGTGAAA
                      ____________________________________________________________
consensus                                                            CTTGCGGGTGAAA
 
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rJMFF035I08+          CTTCTCAAGAAAGCGGCGAGCAAGCGGGGACAGAAAAAGAAAGTCTGGAGGGAGTCAGAT
                      ____________________________________________________________
consensus             CTTCTCAAGAAAGCGGCGAGCAAGCGGGGACAGAAAAAGAAAGTCTGGAGGGAGTCAGAT
 
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rJMFF035I08+          CCTGATAGGCATACTTGTGGTCAAGCATNTGATCAAGCTATAGATGAGGAGAACCACCAT
rJMFF047N10+                                                 ATAGATGAGGAGAACCACCAT
                      ____________________________________________________________
consensus             CCTGATAGGCATACTTGTGGTCAAGCATNTGATCAAGCTATAGATGAGGAGAACCACCAT
 
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rJMFF035I08+          CCAAGCGAGCACCATGGTGATTCACATGATGAAGAGGAAGGGGACCATTTATCAAAGGAG
rJMFF047N10+          CCAAGCGAGCACCATGGTGATTCACATGATGAAGAGGAAGGGGACCATTTATCAAAGGAG
                      ____________________________________________________________
consensus             CCAAGCGAGCACCATGGTGATTCACATGATGAAGAGGAAGGGGACCATTTATCAAAGGAG
 
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rJMFF035I08+          ACAATTGGNGAGCATGCACCAAGGGAAAAAAATGGACATACAGGGCGCAACAGAGGACGT
rJMFF047N10+          ACAATTGGCGAGCATGCACCAAGGGAAAAAAATGGACATACAGGGCGCAACAGAGGACGT
                      ____________________________________________________________
consensus             ACAATTGGCGAGCATGCACCAAGGGAAAAAAATGGACATACAGGGCGCAACAGAGGACGT
 
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rJMFF035I08+          GGAAGGAGGCCGCAAAAACGTGGTACAAATATGCCAGTCCATGGAATGCATCCTTCCTCC
rJMFF047N10+          GGAAGGAGGCCGCAAAAACGTGGTACAAATATGGCAGTCCATGGAATGCATCCTTCCTCC
                      ____________________________________________________________
consensus             GGAAGGAGGCCGCAAAAACGTGGTACAAATATGGCAGTCCATGGAATGCATCCTTCCTCC
 
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rJMFF035I08+          GGTCACGGTCATGGTACTGAACCCTCAAAACCTCCTCCGGGTCCAAGAATGCCAGATGGA
rJMFF047N10+          GGTCACGGTCATGGTACTGAACGCTCAAAACCTCCTCCGGGTCCAAGAATGCCAGATGGA
                      ____________________________________________________________
consensus             GGTCACGGTCATGGTACTGAACGCTCAAAACCTCCTCCGGGTCCAAGAATGCCAGATGGA
 
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rJMFF035I08+          ACTAGAGGATTTACAATGGGGCGAGGACGACCTCTGGCTTCAAGTCCAGTCTAATGTTGC
rJMFF047N10+          ACTAGAGGATTTACAATGGGGCGAGGACGACCTCTGGCTTCAAGTCCAGTCTAATGTTGC
rJMFF042C14+               AGGATTTACAATGGGGCGAGGACGACCTCTGGCTTCAAGTCCAGTCTAATGTTGC
JMFF042C14-                AGGATTTACAATGGGGCGAGGACGACCTCTGGCTTCAAGTCCAGTCTAATGTTGC
                      ____________________________________________________________
consensus             ACTAGAGGATTTACAATGGGGCGAGGACGACCTCTGGCTTCAAGTCCAGTCTAATGTTGC
 
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rJMFF035I08+          TTNTATAGTGTTTGGTTGTTTGATGATCCTGGTGTGTAAATGCAGGCACAGCCTGGTCAT
rJMFF047N10+          TTCTATAGTGTTTGGTTGTTTGATGATCCTGGTGTGGTAATGCAGGCACAGCCTGGTCAT
rJMFF042C14+          TTCTATAGTGTTTGGTTGTTTGATGATCCTGGTGTGTAAATGCAGGCACAGCCTGGTCAT
JMFF042C14-           TTCTATAGTGTTTGGTTGTTTGATGATCCTGGTGTGTAAATGCAGGCACAGCCTGGTCAT
                      ____________________________________________________________
consensus             TTCTATAGTGTTTGGTTGTTTGATGATCCTGGTGTGTAAATGCAGGCACAGCCTGGTCAT
 
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rJMFF035I08+          GTATAACAATTAGTGATGGATTTCTGGCGCCTGCTTTTGGTGGTTCTATTTTTTATTTTT
rJMFF047N10+          GTATAACAATTAGTGATGGGTTTCTGGCGCCTGCTTTTGGTGGTTCTATTTTTTATTTTT
rJMFF042C14+          GTATAACAATTAGTGATGGATTTCTGGCGCCTGTTTTTGGTGGTTCTATTTTTTATTTTT
JMFF042C14-           GTATAACAATTAGTGATGGATTTCTGGCGCCTGTTTTTGGTGGTTCTATTTTTTATTTTT
                      ____________________________________________________________
consensus             GTATAACAATTAGTGATGGATTTCTGGCGCCTGTTTTTGGTGGTTCTATTTTTTATTTTT
 
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rJMFF035I08+          GCTTTGTAATGGTCTCTACTACCTATAACTCGATGCTTATGGAGAATGGGG         
rJMFF047N10+          GCTTTGTAATGGTCTCTACTACCTATAACTGGATGCTTATGGAGAATGGGGTGTTTTAAT
rJMFF042C14+          GCTTTGTAATGGTCTCTACTACCTATAACTTGATGCTTATGGAGAATGGGGTGTTTTAAT
JMFF042C14-           GCTTTGTAATGGTCTCTACTACCTATAACTTGATGCTTATGGAGAATGGGGTGTTTTAAT
                      ____________________________________________________________
consensus             GCTTTGTAATGGTCTCTACTACCTATAACTTGATGCTTATGGAGAATGGGGTGTTTTAAT
 
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rJMFF047N10+          TGAATCCTTGCAACTTT                                           
rJMFF042C14+          TGAATCCTTGCAACTTTGCTAGATCCTCCCTCGCCAAATTTTACTGTGTATCATGGTCCA
JMFF042C14-           TGAATCCTTGCAACTTTGCTAGATCCTCCCTCGCCAAATTTTACTGTGTATCATGGTCCA
                      ____________________________________________________________
consensus             TGAATCCTTGCAACTTTGCTAGATCCTCCCTCGCCAAATTTTACTGTGTATCATGGTCCA
 
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rJMFF042C14+          AAATAGTTTCGTTTCTAAAGAAACGACACACATTCGGTGTCC                  
JMFF042C14-           AAATAGTTTCGTTTCTAAAGAAACGACACACATTCGGTGTCCAAAAAAAAAAAAAAAACC
                      ____________________________________________________________
consensus             AAATAGTTTCGTTTCTAAAGAAACGACACACATTCGGTGTCCAAAAAAAAAAAAAAAACC