Contig 006055:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033D05Sequence555006055 (2)758011144 (2)ref|XP_009777972.1|1e-38PREDICTED: UPF0481 protein At3g47200-like, partial [Nicotiana sylvestris]
JMFF041E04Sequence644006055 (2)620011144 (2)ref|XP_004236861.1|2e-35PREDICTED: putative UPF0481 protein At3g02645 isoform X1 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF041E04+                           TAGCCTTGTACTTTTGGGTCTTGAATTCGTACTTGGGGCCAATG
                      ____________________________________________________________
consensus                             TAGCCTTGTACTTTTGGGTCTTGAATTCGTACTTGGGGCCAATG
 
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JMFF033D05+                                                            TAATATCACTT
JMFF041E04+           GATACCAAAGTTGGTTTAAGATTGTCACCACTTGATNTGCCCTCCTTTCTAATATCACTT
                      ____________________________________________________________
consensus             GATACCAAAGTTGGTTTAAGATTGTCACCACTTGATNTGCCCTCCTTTCTAATATCACTT
 
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JMFF033D05+           CCTCCGTTGTGAGTTNGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCT
JMFF041E04+           CCTCCGTTGTGAGTTTGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCT
                      ____________________________________________________________
consensus             CCTCCGTTGTGAGTTTGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCT
 
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JMFF033D05+           GGCCTCTCCTTTCCATGATTACTTCGCCCGCTCTGAGTTTGATCACTTGAATTATCTATG
JMFF041E04+           TGCCTCTCCTTTCCATGATTACTTCGCCCGCTCTGAGTTTGATCACTTGAATTATCTATG
                      ____________________________________________________________
consensus             TGCCTCTCCTTTCCATGATTACTTCGCCCGCTCTGAGTTTGATCACTTGAATTATCTATG
 
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JMFF033D05+           TTCAAAACATGATCTTGTGGACCAGCTTGTTTCTCCTTTCTAATATCACTTCCTCTGTTG
JMFF041E04+           TTCAAAACATGATCTTGTGGACCAGCTTGTTTCTCCTTTCTAATATCACTTCCTCTGTTG
                      ____________________________________________________________
consensus             TTCAAAACATGATCTTGTGGACCAGCTTGTTTCTCCTTTCTAATATCACTTCCTCTGTTG
 
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JMFF033D05+           TGAGTTTGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCTTGCCTCTCC
JMFF041E04+           TGAGTTTGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCTTGCCTCTCC
                      ____________________________________________________________
consensus             TGAGTTTGACAAGTTAAACAACTTGTGTTCAATGCCTTATCTTGTGAACCTTGCCTCTCC
 
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JMFF033D05+           TTTCCATGATTACTTCGCCCGCTCTAATCACTTGAATTATCTATGTTCAAAACATGATCT
JMFF041E04+           TTTCCATGATTACTTCGCCCGCTCTAATCACTTGAATTATCTATGTTCAAAACATGATCT
                      ____________________________________________________________
consensus             TTTCCATGATTACTTCGCCCGCTCTAATCACTTGAATTATCTATGTTCAAAACATGATCT
 
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JMFF033D05+           TGTGGACCAGCTTGTTTCTCCTTTCCATTATCAGCTCTCCGTTGATGGAGCAAAGGGACC
JMFF041E04+           TGTGGACCAGCTTGTTTCTCCTTTCCATTATCAGCTCTCCGTTGATGGAGCAAAGGGACC
                      ____________________________________________________________
consensus             TGTGGACCAGCTTGTTTCTCCTTTCCATTATCAGCTCTCCGTTGATGGAGCAAAGGGACC
 
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JMFF033D05+           GACAGGTCATTTCTTGTAGCAATGTTTGAATAATTGAGCGCCATCCAACCTTTATTTTTC
JMFF041E04+           GACAGGTCATTTCTTGTAGCAATGTTTGAATAATTGAGCGCCATCCAACCTTTATTTTTC
                      ____________________________________________________________
consensus             GACAGGTCATTTCTTGTAGCAATGTTTGAATAATTGAGCGCCATCCAACCTTTATTTTTC
 
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JMFF033D05+           ATCCACAACAATGAAGTCATTAGTTTTTTTACTTCCATTCATTGCCGAGACAAATTGTTT
JMFF041E04+           ATCCACAACAATGAAGTCATTAGTTTTTTTACTTCCATTCATTGCCGAGACAAATTGTTT
                      ____________________________________________________________
consensus             ATCCACAACAATGAAGTCATTAGTTTTTTTACTTCCATTCATTGCCGAGACAAATTGTTT
 
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JMFF033D05+           TGGGAGTTGTCAATGACAATTGCTACAATTGCTGAGGAGAGGAGAAGAGAGGAGAGGACT
JMFF041E04+           TGGGAGTTGTCAATGACAATTGCTACAATTGCTGAGGAGAGGAGAAGAGAGGAGAGGACT
                      ____________________________________________________________
consensus             TGGGAGTTGTCAATGACAATTGCTACAATTGCTGAGGAGAGGAGAAGAGAGGAGAGGACT