Contig 006050:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF039H18-                                                           CATTGCAGAGT
rJMFF010C17-                                              AGTCAGTCTAATCCATTGCAGAGT
                      ____________________________________________________________
consensus                                                 AGTCAGTCTAATCCATTGCAGAGT
 
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rJMFF039H18-          ATTTTAAGGAGAACAAGTCAAGTCTAATCCATTGCAGAGTATTTTAAGGAGCACATTATA
rJMFF010C17-          ATTTTAAGGAGAACAAGTCAAGTCTAATCCATTGCAGAGTATTTTAAGGAGCACATTATA
                      ____________________________________________________________
consensus             ATTTTAAGGAGAACAAGTCAAGTCTAATCCATTGCAGAGTATTTTAAGGAGCACATTATA
 
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rJMFF039H18-          TAAAGCAAACGACAATCCAGATGATATAAGAATATGGGCTGGGCAGAATGGAATGCAATA
rJMFF010C17-          TAAAGCAAACGACAATCCAGATGATATAAGAATATGGGCTGGGCAGAATGGAATGCAATA
                      ____________________________________________________________
consensus             TAAAGCAAACGACAATCCAGATGATATAAGAATATGGGCTGGGCAGAATGGAATGCAATA
 
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rJMFF039H18-          TCTGCTCATGATTGACCAAAGTAAGCAGTGGATGGTGTTGAAGGAAAATATAGTACAAAT
rJMFF010C17-          TCTGCTCATGATTGACCAAAGTAAGCAGTGGATGGTGTTGAAGGAAAATATAGTACAAAT
                      ____________________________________________________________
consensus             TCTGCTCATGATTGACCAAAGTAAGCAGTGGATGGTGTTGAAGGAAAATATAGTACAAAT
 
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rJMFF039H18-          ACAACCACCTCCACCAACTAAATTCATCAAATCTTACACTTCTCTCAAAGGTGTCTGTCC
rJMFF010C17-          ACAACCACCTCCACCAACTAAATTCATCAAATCTTACACTTCTCTCAAAGGTGTCTGTCC
                      ____________________________________________________________
consensus             ACAACCACCTCCACCAACTAAATTCATCAAATCTTACACTTCTCTCAAAGGTGTCTGTCC
 
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rJMFF039H18-          AAAGCTCAATTGACTGACCCTAGCTGAGTATTAGCGATTGACTTCAGCAGGCAAGGGTCG
rJMFF010C17-          AAAGCTCAATTGACTGACCCTAGCTGAGTATTAGCGATTGACTTCAGCAGGCAAGGGTCG
                      ____________________________________________________________
consensus             AAAGCTCAATTGACTGACCCTAGCTGAGTATTAGCGATTGACTTCAGCAGGCAAGGGTCG
 
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rJMFF039H18-          ATTGAACCCTCCACGCCGGTTCATGTACTGTCGAGGCTGCCTTTTGGTCACTTTCCTCAC
rJMFF010C17-          ATTGAACCCTCCACGCCGGTTCATGTACTGTCGAGGCTGCCTTTTGGTCACTTTCCTCAC
                      ____________________________________________________________
consensus             ATTGAACCCTCCACGCCGGTTCATGTACTGTCGAGGCTGCCTTTTGGTCACTTTCCTCAC
 
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rJMFF039H18-          AGCGCCCACATCGTTCCCAGAAACAGGCTTTCCCTTAGTCGAATCAAACCCTACAGGAAT
rJMFF010C17-          AGCGCCCACATCGTTCCCAGAAACAGGCTTTCCCTTAGTCGAATCAAACCCTACAGGAAT
                      ____________________________________________________________
consensus             AGCGCCCACATCGTTCCCAGAAACAGGCTTTCCCTTAGTCGAATCAAACCCTACAGGAAT
 
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rJMFF039H18-          ACCCAATTTCTTCATCATCTCAAGCTCGTCCTCATCAATCATCTCTGCACCCCCTTCCGC
rJMFF010C17-          ACCCAATTTCTTCATCATCTCAAGCTCGTCCTCATCAATCATCTCTGCACCCCCTTCCGC
JMFF010C17+                       CATCATCTCAAGCTCGTCCTCATCAATCATCTCTGCACCCCCTTCCGC
                      ____________________________________________________________
consensus             ACCCAATTTCTTCATCATCTCAAGCTCGTCCTCATCAATCATCTCTGCACCCCCTTCCGC
 
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rJMFF039H18-          AGCTGCGCCGCCCTCTCCATCCTGCTTCTGCTTCTGCTCCTTGGCAATTCCATCAACGAA
rJMFF010C17-          AGCTGCGCCGCCCTCTCCATCCTGCTTCTGCTTCTGCTCCTTGGCAATTCCATCAACGAA
JMFF010C17+           AGCTGCGCCGCCCTCTCCATCCTGCTTCTGCTTCTGCTCCTTGGCAATTCCATCAACGAA
JMFF039H18+                                 TGCTTCTGCTTCTGCTCCTTGGCAATTCCATCAACGAA
                      ____________________________________________________________
consensus             AGCTGCGCCGCCCTCTCCATCCTGCTTCTGCTTCTGCTCCTTGGCAATTCCATCAACGAA
 
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rJMFF039H18-          ATCCGAAACAGCCCTCTGCCTGTCCCGCTGCCTATCCCTATCCTTTTCACCCTCCTCCTT
rJMFF010C17-          ATCCGAAACAGCCCTCTGCCTGTCCCGCTGCCTATCCCTATCCTTTTCACCCTCCTCCTT
JMFF010C17+           ATCCGAAACAGCCCTCTGCCTGTCCCGCTGCCTATCCCTATCCTTTTCACCCTCCTCCTT
JMFF039H18+           ATCCGAAACAGCCCTCTGCCTGTCCCGCTGCCTATCCCTATCCTTTTCACCCTCCTCCTT
                      ____________________________________________________________
consensus             ATCCGAAACAGCCCTCTGCCTGTCCCGCTGCCTATCCCTATCCTTTTCACCCTCCTCCTT
 
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rJMFF039H18-          GTGGCGTTTTCTGGGAGGGCTTTCGGGGGAAGGAGTGCGGTGGCGGTGGTGATTCCNGTT
rJMFF010C17-          GTGGCGTTTTCTGGGAGGGCTTTCGGGGGAANGAGTGCGGTGGCGGTGGTGATTCCGGTT
JMFF010C17+           GTGGCGTTTTCTGGGAGGGCTTTCGGGGGAAGGAGTGCGGTGGCGGTGGTGATTCCGGTT
JMFF039H18+           GTGGCGTTTTCTGGGAGGGCTTTCGGGGGAAGGAGTGCGGTGGCGGTGGTGATTCCGGTT
                      ____________________________________________________________
consensus             GTGGCGTTTTCTGGGAGGGCTTTCGGGGGAAGGAGTGCGGTGGCGGTGGTGATTCCGGTT
 
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rJMFF039H18-          TCGGTGGTGAC                                                 
rJMFF010C17-          TCGGTGGTGAC                                                 
JMFF010C17+           TCGGTGGTGACGGTCAGGAGAGCGCGAACGAGACGGTGAACGATGGCGGTGACGGTGGCG
JMFF039H18+           TCGGTGGTGACGGTCAGGAGAGCGCGAACGAGACGGTGAACGATGGCGGTGACGGTGGCG
                      ____________________________________________________________
consensus             TCGGTGGTGACGGTCAGGAGAGCGCGAACGAGACGGTGAACGATGGCGGTGACGGTGGCG
 
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JMFF010C17+           GTCGGTTGACGGGGAGCCAGTGCGGGAACGGGCTCTCCGGGATCTGACACGGTCGGGTGT
JMFF039H18+           GTCGGTTGACGGGGAGCCAGTGCGGGAACGGGCTCTCCGGGATCTGACACGGTCGGGTGT
                      ____________________________________________________________
consensus             GTCGGTTGACGGGGAGCCAGTGCGGGAACGGGCTCTCCGGGATCTGACACGGTCGGGTGT
 
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JMFF010C17+           ATACGAACGCGAACGGGAAGGGGAAGGAGACCGCTTGCTGCGCTCCCCTTCTTTCCGGTC
JMFF039H18+           ATACGAACGCGAACGGGAAGGAGAAGGAGACCGCTTGCTGCGCTCCCCTTCTTTCCGGTC
                      ____________________________________________________________
consensus             ATACGAACGCGAACGGGAAGGGGAAGGAGACCGCTTGCTGCGCTCCCCTTCTTTCCGGTC
 
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JMFF010C17+           TCGGTCGCGGTCGCGGTCGCGTTCATCACGGTCTCTTTTTCGATCTCTATCTCGCTCCCT
JMFF039H18+           TCGGTCGCGGTCGCGGTCGCGTTCATCACGGTCTCTTTTTCGATCTCTATCTCGCTCCCT
                      ____________________________________________________________
consensus             TCGGTCGCGGTCGCGGTCGCGTTCATCACGGTCTCTTTTTCGATCTCTATCTCGCTCCCT
 
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JMFF010C17+           GTCTCTATTGTATCTATCCTTGTCTCTTTCTCTTTCGCGGTCCCTATCTCGGTCTCGATC
JMFF039H18+           GTCTCTATTGTATCTATCCTTGTCTCTTTCTCTTTCGCGGTCCCTATCTCGGTCTCGATC
                      ____________________________________________________________
consensus             GTCTCTATTGTATCTATCCTTGTCTCTTTCTCTTTCGCGGTCCCTATCTCGGTCTCGATC
 
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JMFF010C17+           GCGAACTCGGTCACGGTCGGTCATGGCGTCGGCGGTGAGAGGCAGATCGAGCC       
JMFF039H18+           GCGAACTCGGTCACGGTCGGTCATGGCGTCGGCGGTGAGAGGCAGATCGAGCCGCAGGAG
                      ____________________________________________________________
consensus             GCGAACTCGGTCACGGTCGGTCATGGCGTCGGCGGTGAGAGGCAGATCGAGCCGCAGGAG
 
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JMFF039H18+           ATTGAGCTCAGCTTACTAGTATTTCAACTTGAGGTTTACCAAGGTATCCTATCGACTATC
                      ____________________________________________________________
consensus             ATTGAGCTCAGCTTACTAGTATTTCAACTTGAGGTTTACCAAGGTATCCTATCGACTATC