Contig 006049:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF039E19-                                                       ATTTTGCACCAATTC
                      ____________________________________________________________
consensus                                                          ATTTTGCACCAATTC
 
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rJMFF039E19-          TGTCCAACAACTCATAAATGAAAATGTTTAACATTGGCTTGTACAAACATGAAACATCCA
                      ____________________________________________________________
consensus             TGTCCAACAACTCATAAATGAAAATGTTTAACATTGGCTTGTACAAACATGAAACATCCA
 
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rJMFF039E19-          ACAATGTAGCACGGTAAATTCTAAGATGGCAGCACTGCCAAATTAACTCATCCATACTGC
                      ____________________________________________________________
consensus             ACAATGTAGCACGGTAAATTCTAAGATGGCAGCACTGCCAAATTAACTCATCCATACTGC
 
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rJMFF039E19-          TAATGTACTTGAACGTGCTCAGCTTTCTTTGGGTAAAAAAGTGACCCTAACAAAACGGCA
                      ____________________________________________________________
consensus             TAATGTACTTGAACGTGCTCAGCTTTCTTTGGGTAAAAAAGTGACCCTAACAAAACGGCA
 
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rJMFF039E19-          ATCCCGGTTATTGCAATGGTAAACAGCAGTCGCTTCTTGGAAAATTCATTGGGGCATCTT
                      ____________________________________________________________
consensus             ATCCCGGTTATTGCAATGGTAAACAGCAGTCGCTTCTTGGAAAATTCATTGGGGCATCTT
 
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rJMFF039E19-          GGAGCACCGCGATCTTGTTCAGCTTCCCTTGCATTCCGGGAAGTTTCTGCAACATTATCT
JMFN038B03+           GGAGCACCGCGATCTTGTTCAGCTTCCCTTGCATTCCGGGAAGTTTCTGCAACATTATCT
                      ____________________________________________________________
consensus             GGAGCACCGCGATCTTGTTCAGCTTCCCTTGCATTCCGGGAAGTTTCTGCAACATTATCT
 
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rJMFF039E19-          GTTATTCCATTGCATCTGCTCTCGTGGACATCCCTTTCTCGGAGTCTAATGTACCTGCTA
JMFN002H11+             TATTCCATTGCATCTGCTCTCATGGGCATTCCTTTCGCATAGTCTGATGTATCTACTA
JMFN038B03+           GTTATTCCATTGCATCTGCTCTCGTGGACATCCCTTTCTCGGAGTCTAATGTACCTGCTA
                      ____________________________________________________________
consensus             GTTATTCCATTGCATCTGCTCTCGTGGACATCCCTTTCTCGGAGTCTAATGTACCTGCTA
 
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rJMFF039E19-          CAGAGTTCGCATAGTTCTGTACGGTTCCCACATACTTCCTGATGCTCAAACAAATCGACT
JMFN002H11+           CAGAGATGACAAAGCTCTGTACGGTTCCCACATACTTCCTGATGCTTATACAAATCGATT
JMFN038B03+           CAGAGTTCGCATAGTTCTGTACGGTTCCCACATACTTCCTGATGCTCAAACAAATCGACT
JMFF039E19+                          TCTGTACGGTTCCCACATACTTCCTGATGCTCAAACAAATCGACT
                      ____________________________________________________________
consensus             CAGAGTTCGCATAGTTCTGTACGGTTCCCACATACTTCCTGATGCTCAAACAAATCGACT
 
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rJMFF039E19-          GCAGGCAAAGGGAACTCGCAGTATTCACATGTAACGATCCTTTGTGGGCAATTTTCACCC
JMFN002H11+           GCAGGTAAAGGAAACTCGCAGTACTCGCAAGTAACAATTCTTTTTGGGCAATTTTCCCCT
JMFN038B03+           GCAGGCAAAGGGAACTCGCAGTATTCACATGTAACGATCCTTTGTGGGCAATTTTCACCC
JMFF039E19+           GCAGGCAAAGGGAACTCGCAGTATTCACATGTAACGATCCTTTGTGGGCAATTTTCACCC
                      ____________________________________________________________
consensus             GCAGGCAAAGGGAACTCGCAGTATTCACATGTAACGATCCTTTGTGGGCAATTTTCACCC
 
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rJMFF039E19-          TTGTGAACAGCTAACACTTCACGTTCCATTGTCTCGCTGCACAAAGAGCAGGACACTGGA
JMFN002H11+           TTATGAACAGCTAAAACTTCACGTTCCATTGTCTCGCTGCACAAGGAGCAAGAAACTGGA
JMFN038B03+           TTGTGAACAGCTAACACTTCACGTTCCATTGTCTCGCTGCACAAAGAGCAGGACACTGGA
JMFF039E19+           TTGTGAACAGCTAACACTTCACGTTCCATTGTCTCGCTGCACAAAGAGCAGGACACTGGA
                      ____________________________________________________________
consensus             TTGTGAACAGCTAACACTTCACGTTCCATTGTCTCGCTGCACAAAGAGCAGGACACTGGA
 
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rJMFF039E19-          GCATGAGTGCTTAAGAAATGGTGTTCTGCATGTATCTTAGGAACCATGTCGCCACAAATT
JMFN002H11+           GCATGAGTGGTTAAGAAATGCTCCTCGGCATGTTTCTTAGGAACCATATCACCACAAGTT
JMFN038B03+           GCATGAGTGCTTAAGAAATGGTGTTCTGCATGTATCTTAGGAACCATGTCGCCACAAATT
JMFF039E19+           GCATGAGTGCTTAAGAAATGGTGTTCTGCATGTATCTTAGGAACCATGTCGCCACAAATT
                      ____________________________________________________________
consensus             GCATGAGTGCTTAAGAAATGGTGTTCTGCATGTATCTTAGGAACCATGTCGCCACAAATT
 
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rJMFF039E19-          TTACATTTTTCTAGATTCCGCGAGCAGTGAGCAATATGCAAATCAAG             
JMFN002H11+           TTACATTTTTCTAGATTCCGAGAGCAGTGAGCGAAATGCAAATCAAGGTTTGAAGAGGGA
JMFN038B03+           TTACATTTTTCTAGATTCCGCGAGCAGTGAGCAATATGCAAATCAAGATTTGAAGAAGGA
JMFF039E19+           TTACATTTTTCTAGATTCCGCGAGCAGTGAGCAATATGCAAATCAAGATTTGAAGAAGGA
                      ____________________________________________________________
consensus             TTACATTTTTCTAGATTCCGCGAGCAGTGAGCAATATGCAAATCAAGATTTGAAGAAGGA
 
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JMFN002H11+           ATTGCCCTGTCACAGTGGCTGCAGATGCTCGTGGCTTGATCAGAAGCTACAGC       
JMFN038B03+           ATTGCTCTGTCACAGTGACTACAGATGCTCGTGGCTTGATCAGGAGCTGCAGCCATTATT
JMFF039E19+           ATTGCTCTGTCACAGTGACTACAGATGCTCGTGGCTTGATCAGGAGCTGCAGCCATTATT
                      ____________________________________________________________
consensus             ATTGCTCTGTCACAGTGACTACAGATGCTCGTGGCTTGATCAGGAGCTGCAGCCATTATT
 
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JMFN038B03+           AGCCTTAACAACAAATTCTCAACAACAAAATAAAATAAAACCTGCAATCTAGAACTGAAG
JMFF039E19+           AGCCTTAACAACAAATTCTCAACAACAAAATAAAATAAAACCTGCAATCTAGAACTGAAG
                      ____________________________________________________________
consensus             AGCCTTAACAACAAATTCTCAACAACAAAATAAAATAAAACCTGCAATCTAGAACTGAAG
 
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JMFN038B03+           AATTGCTTGCTTTGTTTCGAATCGATCTACCGATCGATGGGCTAATTGATGGAATGTGAC
JMFF039E19+           AATTGCTTGCTTTGTTTCGAATCGATCTACCGATCGATGGGCTAATTGATGGAATGTGAC
                      ____________________________________________________________
consensus             AATTGCTTGCTTTGTTTCGAATCGATCTACCGATCGATGGGCTAATTGATGGAATGTGAC
 
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JMFN038B03+           GGAGAAT                                                     
JMFF039E19+           GGAGAATTATCAGGCTCTGAAATGGAGAGTACGAACAGATAACAGAGTCCACAACACAAT
                      ____________________________________________________________
consensus             GGAGAATTATCAGGCTCTGAAATGGAGAGTACGAACAGATAACAGAGTCCACAACACAAT