Contig 006044:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038M03Sequence462006044 (3)ref|XP_011081914.1|1e-55PREDICTED: 3-ketoacyl-CoA synthase 11 [Sesamum indicum]751004123 (3)ref|XP_010048253.1|4e-82PREDICTED: 3-ketoacyl-CoA synthase 11-like [Eucalyptus grandis] gb|KCW80459.1| h
JMFF039P19Sequence456006044 (3)ref|XP_011081914.1|5e-54PREDICTED: 3-ketoacyl-CoA synthase 11 [Sesamum indicum]691004123 (3)ref|XP_010048253.1|1e-83PREDICTED: 3-ketoacyl-CoA synthase 11-like [Eucalyptus grandis] gb|KCW80459.1| h
JMFF045G10Sequence631006044 (3)ref|XP_011081914.1|6e-97PREDICTED: 3-ketoacyl-CoA synthase 11 [Sesamum indicum]651004123 (3)ref|XP_010048253.1|2e-57PREDICTED: 3-ketoacyl-CoA synthase 11-like [Eucalyptus grandis] gb|KCW80459.1| h

Alignment

This contig is upended


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JMFF045G10+                                   GCCATGCAAGGATTAGGTGGCACTCTTAACACAGCT
                      ____________________________________________________________
consensus                                     GCCATGCAAGGATTAGGTGGCACTCTTAACACAGCT
 
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JMFF045G10+           TCAGGAAGATAAGTCGATTCACCAAGACCCGACCTCTCAAGAATCTTCTTTTGAAACCTG
                      ____________________________________________________________
consensus             TCAGGAAGATAAGTCGATTCACCAAGACCCGACCTCTCAAGAATCTTCTTTTGAAACCTG
 
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JMFF045G10+           AGGTTCTCCTCAGAGAACGTCCCAGTCAACCCGGACCTCTCCATGAAAATCTGCCTTGTG
                      ____________________________________________________________
consensus             AGGTTCTCCTCAGAGAACGTCCCAGTCAACCCGGACCTCTCCATGAAAATCTGCCTTGTG
 
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JMFF045G10+           CACTTCCTAGCCTCCTCTGGCTTGTAGCAAGAGAAATCCACAAGGTACACAGGGCGGGGA
JMFF039P19+                                   TAGCAAGAGAAATCCACAAGGTACACAGGGCGGGGA
JMFF038M03+                                   TAGCAAGAGAAATCCACAAGGTACACAGGGCGGGGA
                      ____________________________________________________________
consensus             CACTTCCTAGCCTCCTCTGGCTTGTAGCAAGAGAAATCCACAAGGTACACAGGGCGGGGA
 
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JMFF045G10+           CGAGTGAGGAAATAAAGGGTGGACAAGAACACCAAAAGGGTGGAGCAAATGATGACAGAA
JMFF039P19+           CGAGTGAGGAAATAAAGGGTGGACAAGAACACCAAAAGGGTGGAGCAAATGATGACAGAA
JMFF038M03+           CGAGTGAGGAAATAAAGGGTGGACAAGAACACCAAAAGGGTGGAGCAAATGATGACAGAA
                      ____________________________________________________________
consensus             CGAGTGAGGAAATAAAGGGTGGACAAGAACACCAAAAGGGTGGAGCAAATGATGACAGAA
 
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JMFF045G10+           ATGAGATTGAATCTAAGATGATCCCACAAAACATAAACATCTTCCAGGGAGAAGGTAGAG
JMFF039P19+           ATGAGATTGAATCTAAGATGATCCCACAAAACATAAACATCTTCCAGGGAGAAGGTAGAG
JMFF038M03+           ATGAGATTGAATCTAAGATGATCCCACAAAACATAAACATCTTCCAGGGAGAAGGTAGAG
                      ____________________________________________________________
consensus             ATGAGATTGAATCTAAGATGATCCCACAAAACATAAACATCTTCCAGGGAGAAGGTAGAG
 
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JMFF045G10+           AGTTGAGCAGCAATGACCACAACAAGGGGGGACAAAAATAGGTACATCCCATGGGTGATA
JMFF039P19+           AGTTGAGCAGCAATGACCACAACAAGGGGGGACAAAAATAGGTACATCCCATGGGTGATA
JMFF038M03+           AGTTGAGCAGCAATGACCACAACAAGGGGGGACAAAAATAGGTACATCCCATGGGTGATA
                      ____________________________________________________________
consensus             AGTTGAGCAGCAATGACCACAACAAGGGGGGACAAAAATAGGTACATCCCATGGGTGATA
 
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JMFF045G10+           AGGTAGTGGTATCCAAGTTTCACATACTTCAATTTCACAGACTGTTTGAAATCAGGCAGT
JMFF039P19+           AGGTAGTGGTATCCAAGTTTCACATACTTCAATTTCACAGACTGTTTGAAATCAGGCAGT
JMFF038M03+           AGGTAGTGGTATCCAAGTTTCACATACTTCAATTTCACAGACTGTTTGAAATCAGGCAGT
                      ____________________________________________________________
consensus             AGGTAGTGGTATCCAAGTTTCACATACTTCAATTTCACAGACTGTTTGAAATCAGGCAGT
 
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JMFF045G10+           TTTCTTGAAGATCCCTCCTCTTGTTTTGGTTCACTCATTTTCATCTCTGCCACTGCTTTG
JMFF039P19+           TTTCTTGAAGATCCCTCCTCTTGTTTTGGTTCACTCATTTTCATCTCTGCCACTGCTTTG
JMFF038M03+           TTTCTTGAAGATCCCTCCTCTTGTTTTGGTTCACTCATTTTCATCTCTGCCACTGCTTTG
                      ____________________________________________________________
consensus             TTTCTTGAAGATCCCTCCTCTTGTTTTGGTTCACTCATTTTCATCTCTGCCACTGCTTTG
 
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JMFF045G10+           GATTCACTCATCCCACTTGTTGAAATGCGGAAAACCCCAAACCGCTGGCCACGGAGAAAC
JMFF039P19+           GATTCACTCATCCCACTTGTTGAAATGCGGAAAACCCCAAACCGCTGGCCACGGAGAAAC
JMFF038M03+           GATTCACTCATCCCACTTGTTGAAATGCGGAAAACCCCAAACCGCTGGCCACGGAGAAAC
                      ____________________________________________________________
consensus             GATTCACTCATCCCACTTGTTGAAATGCGGAAAACCCCAAACCGCTGGCCACGGAGAAAC
 
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JMFF045G10+           CTAATAGCGTATAGAGAAGAGAGAGAAAGCGAGGGAGAGAGAGAGAGAGAGAGAA     
JMFF039P19+           NTAATAGCGTATAGAGAAGAGAGAGAAAGCGAGGGAGAGAGAGAGAGAGAGAGAA     
JMFF038M03+           CTAATAGCGTATAGAGAAGAGAGAGAAAGCGAGGGAGAGAGAGAGAGAGAGAGAAGAGAC
                      ____________________________________________________________
consensus             CTAATAGCGTATAGAGAAGAGAGAGAAAGCGAGGGAGAGAGAGAGAGAGAGAGAAGAGAC