Contig 006044:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038M03Sequence462006044 (3)ref|XP_011081914.1|1e-55PREDICTED: 3-ketoacyl-CoA synthase 11 [Sesamum indicum]751004123 (3)ref|XP_010048253.1|4e-82PREDICTED: 3-ketoacyl-CoA synthase 11-like [Eucalyptus grandis] gb|KCW80459.1| h
JMFF039P19Sequence456006044 (3)ref|XP_011081914.1|5e-54PREDICTED: 3-ketoacyl-CoA synthase 11 [Sesamum indicum]691004123 (3)ref|XP_010048253.1|1e-83PREDICTED: 3-ketoacyl-CoA synthase 11-like [Eucalyptus grandis] gb|KCW80459.1| h
JMFF045G10Sequence631006044 (3)ref|XP_011081914.1|6e-97PREDICTED: 3-ketoacyl-CoA synthase 11 [Sesamum indicum]651004123 (3)ref|XP_010048253.1|2e-57PREDICTED: 3-ketoacyl-CoA synthase 11-like [Eucalyptus grandis] gb|KCW80459.1| h

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF045G10+ GCCATGCAAGGATTAGGTGGCACTCTTAACACAGCT
                      ____________________________________________________________
consensus GCCATGCAAGGATTAGGTGGCACTCTTAACACAGCT
 
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JMFF045G10+ TCAGGAAGATAAGTCGATTCACCAAGACCCGACCTCTCAAGAATCTTCTTTTGAAACCTG
                      ____________________________________________________________
consensus TCAGGAAGATAAGTCGATTCACCAAGACCCGACCTCTCAAGAATCTTCTTTTGAAACCTG
 
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JMFF045G10+ AGGTTCTCCTCAGAGAACGTCCCAGTCAACCCGGACCTCTCCATGAAAATCTGCCTTGTG
                      ____________________________________________________________
consensus AGGTTCTCCTCAGAGAACGTCCCAGTCAACCCGGACCTCTCCATGAAAATCTGCCTTGTG
 
. : . : . : . : . : . :
JMFF045G10+ CACTTCCTAGCCTCCTCTGGCTTGTAGCAAGAGAAATCCACAAGGTACACAGGGCGGGGA
JMFF039P19+ TAGCAAGAGAAATCCACAAGGTACACAGGGCGGGGA
JMFF038M03+ TAGCAAGAGAAATCCACAAGGTACACAGGGCGGGGA
                      ____________________________________________________________
consensus CACTTCCTAGCCTCCTCTGGCTTGTAGCAAGAGAAATCCACAAGGTACACAGGGCGGGGA
 
. : . : . : . : . : . :
JMFF045G10+ CGAGTGAGGAAATAAAGGGTGGACAAGAACACCAAAAGGGTGGAGCAAATGATGACAGAA
JMFF039P19+ CGAGTGAGGAAATAAAGGGTGGACAAGAACACCAAAAGGGTGGAGCAAATGATGACAGAA
JMFF038M03+ CGAGTGAGGAAATAAAGGGTGGACAAGAACACCAAAAGGGTGGAGCAAATGATGACAGAA
                      ____________________________________________________________
consensus CGAGTGAGGAAATAAAGGGTGGACAAGAACACCAAAAGGGTGGAGCAAATGATGACAGAA
 
. : . : . : . : . : . :
JMFF045G10+ ATGAGATTGAATCTAAGATGATCCCACAAAACATAAACATCTTCCAGGGAGAAGGTAGAG
JMFF039P19+ ATGAGATTGAATCTAAGATGATCCCACAAAACATAAACATCTTCCAGGGAGAAGGTAGAG
JMFF038M03+ ATGAGATTGAATCTAAGATGATCCCACAAAACATAAACATCTTCCAGGGAGAAGGTAGAG
                      ____________________________________________________________
consensus ATGAGATTGAATCTAAGATGATCCCACAAAACATAAACATCTTCCAGGGAGAAGGTAGAG
 
. : . : . : . : . : . :
JMFF045G10+ AGTTGAGCAGCAATGACCACAACAAGGGGGGACAAAAATAGGTACATCCCATGGGTGATA
JMFF039P19+ AGTTGAGCAGCAATGACCACAACAAGGGGGGACAAAAATAGGTACATCCCATGGGTGATA
JMFF038M03+ AGTTGAGCAGCAATGACCACAACAAGGGGGGACAAAAATAGGTACATCCCATGGGTGATA
                      ____________________________________________________________
consensus AGTTGAGCAGCAATGACCACAACAAGGGGGGACAAAAATAGGTACATCCCATGGGTGATA
 
. : . : . : . : . : . :
JMFF045G10+ AGGTAGTGGTATCCAAGTTTCACATACTTCAATTTCACAGACTGTTTGAAATCAGGCAGT
JMFF039P19+ AGGTAGTGGTATCCAAGTTTCACATACTTCAATTTCACAGACTGTTTGAAATCAGGCAGT
JMFF038M03+ AGGTAGTGGTATCCAAGTTTCACATACTTCAATTTCACAGACTGTTTGAAATCAGGCAGT
                      ____________________________________________________________
consensus AGGTAGTGGTATCCAAGTTTCACATACTTCAATTTCACAGACTGTTTGAAATCAGGCAGT
 
. : . : . : . : . : . :
JMFF045G10+ TTTCTTGAAGATCCCTCCTCTTGTTTTGGTTCACTCATTTTCATCTCTGCCACTGCTTTG
JMFF039P19+ TTTCTTGAAGATCCCTCCTCTTGTTTTGGTTCACTCATTTTCATCTCTGCCACTGCTTTG
JMFF038M03+ TTTCTTGAAGATCCCTCCTCTTGTTTTGGTTCACTCATTTTCATCTCTGCCACTGCTTTG
                      ____________________________________________________________
consensus TTTCTTGAAGATCCCTCCTCTTGTTTTGGTTCACTCATTTTCATCTCTGCCACTGCTTTG
 
. : . : . : . : . : . :
JMFF045G10+ GATTCACTCATCCCACTTGTTGAAATGCGGAAAACCCCAAACCGCTGGCCACGGAGAAAC
JMFF039P19+ GATTCACTCATCCCACTTGTTGAAATGCGGAAAACCCCAAACCGCTGGCCACGGAGAAAC
JMFF038M03+ GATTCACTCATCCCACTTGTTGAAATGCGGAAAACCCCAAACCGCTGGCCACGGAGAAAC
                      ____________________________________________________________
consensus GATTCACTCATCCCACTTGTTGAAATGCGGAAAACCCCAAACCGCTGGCCACGGAGAAAC
 
. : . : . : . : . : . :
JMFF045G10+ CTAATAGCGTATAGAGAAGAGAGAGAAAGCGAGGGAGAGAGAGAGAGAGAGAGAA
JMFF039P19+ NTAATAGCGTATAGAGAAGAGAGAGAAAGCGAGGGAGAGAGAGAGAGAGAGAGAA
JMFF038M03+ CTAATAGCGTATAGAGAAGAGAGAGAAAGCGAGGGAGAGAGAGAGAGAGAGAGAAGAGAC
                      ____________________________________________________________
consensus CTAATAGCGTATAGAGAAGAGAGAGAAAGCGAGGGAGAGAGAGAGAGAGAGAGAAGAGAC