Contig 006042:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038I12Sequence446006042 (3)744002630 (3)ref|XP_009792568.1|6e-83PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X1 [Ni
JMFS058C12Sequence626006042 (3)ref|XP_011072089.1|6e-38PREDICTED: SPX domain-containing membrane protein At4g22990-like [Sesamum indic
JMFS127G03Sequence626006042 (3)ref|XP_011072089.1|1e-37PREDICTED: SPX domain-containing membrane protein At4g22990-like [Sesamum indic

Alignment

This contig is upended


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JMFS058C12+                                                                    CAG
                      ____________________________________________________________
consensus                                                                      CAG
 
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JMFS058C12+           CAATCCTGCCTGCAAGTGCTCCTGNTTGTTCTAACAGGAAAAGAACAATCTTTTCAATCT
JMFS127G03+             ATCCTGCCTGCAAGTGCTCCTTGTTGTTCTAACAGGAAAAGAACAATCTTTTCAATCT
                      ____________________________________________________________
consensus             CAATCCTGCCTGCAAGTGCTCCTTGTTGTTCTAACAGGAAAAGAACAATCTTTTCAATCT
 
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JMFS058C12+           GGTTGTCCAGCATTCGGGAGAAATCCTTGAGAACATGTCGGCGATCCAGTGCCCCAGCTT
JMFS127G03+           GGTTGTCCAGCATTCGGGAGAAATCCTTGAGAACATGTCGGCGATCCAGTGCCCCAGCTT
                      ____________________________________________________________
consensus             GGTTGTCCAGCATTCGGGAGAAATCCTTGAGAACATGTCGGCGATCCAGTGCCCCAGCTT
 
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JMFS058C12+           CAATCTGGTTCGAATACTGCCTAACCTTTTTCTTCATTATTTTGTAGTTGATGTAATATC
JMFS127G03+           CAATCTGGTTCGAATACTGCCTAACCTTTTTCTTCATTATTTTGTAGTTGATGTAATATC
                      ____________________________________________________________
consensus             CAATCTGGTTCGAATACTGCCTAACCTTTTTCTTCATTATTTTGTAGTTGATGTAATATC
 
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JMFS058C12+           CTTGCCATTCTTGAATTTGTCTTTCCTTCAGCTTCTTCCCAAAAGCAACCATCTCTAGTC
JMFS127G03+           CTTGCCATTCTTGAATTTGTCTTTCCTTCAGCTTCTTCCCAAAAGCAACCATCTCTAGTC
                      ____________________________________________________________
consensus             CTTGCCATTCTTGAATTTGTCTTTCCTTCAGCTTCTTCCCAAAAGCAACCATCTCTAGTC
 
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JMFS058C12+           TCTTACAAAGTGTTGAAGGGGAACTAGATGAGCATCAACAAACACAGACGAAAGACAATC
JMFS127G03+           TCTTACAAAGTGTTGAAGGGGAACTAGATGAGCATCAACAAACACAGACGAAAGACAATC
                      ____________________________________________________________
consensus             TCTTACAAAGTGTTGAAGGGGAACTAGATGAGCATCAACAAACACAGACGAAAGACAATC
 
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JMFS058C12+           AAATCTTCACTCTCGAAGAAATCCCGTTTCGGAATATTCGCGTATAACCCAACCCAGTCC
JMFS127G03+           AAATCTTCACTCTCGAAGAAATCCCGTTTCGGAATATTCGCGTATAACCCAACCCAGTCC
                      ____________________________________________________________
consensus             AAATCTTCACTCTCGAAGAAATCCCGTTTCGGAATATTCGCGTATAACCCAACCCAGTCC
 
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JMFS058C12+           AAGCTACAGACCTACAGCAACACGACACGTAACGGATTCCAGTTCAAATCCTCACTAGAA
JMFS127G03+           AAGCTACAGACCTACAGCAACACGACACGTAACGGATTCCAGTTCAAATCCTCACTAGAA
                      ____________________________________________________________
consensus             AAGCTACAGACCTACAGCAACACGACACGTAACGGATTCCAGTTCAAATCCTCACTAGAA
 
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JMFS058C12+           TTCCGGATCGTTTTTTTATTCCACACAGAAAGGCGGAAACAATCCAGCCGCCTCACCTCC
JMFS127G03+           TTCCGGATCGTTTTTTTATTCCACACAGAAAGGCGGAAACAATCCAGCCGCCTCACCTCC
JMFF038I12+                                                   AATCCAGCCGCCTCACCTCC
                      ____________________________________________________________
consensus             TTCCGGATCGTTTTTTTATTCCACACAGAAAGGCGGAAACAATCCAGCCGCCTCACCTCC
 
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JMFS058C12+           AACTTTTTCCAAGACAAAAACCCGAATTCGTCTTCCTCTGGTTGAGTTTACTAGTCAGGC
JMFS127G03+           AACTTTTTCCAAGACAAAAACCCGAATTCGTCTTCCTCTGGTTGAGTTTACTAGTCAGGC
JMFF038I12+           AACTTTTTCCAAGACAAAAACCCGAATTCGTCTTCCTCTGGTTGAGTTTACTAGTCAGGC
                      ____________________________________________________________
consensus             AACTTTTTCCAAGACAAAAACCCGAATTCGTCTTCCTCTGGTTGAGTTTACTAGTCAGGC
 
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JMFS058C12+           GGCGGCGGCGACGACAGAGCGGGGCGGGAGATGAAGATAGGAGAAGAAGAGTTGTG-GGT
JMFS127G03+           GGCGGCGGCGACGACAGAGCGGGGCGGGAGATGAAGATAGGAGAAGAAGAGTTGTGTGGT
JMFF038I12+           GGCGGCGGCGACGACAGAGCGGGGCGGGAGATGAAGATAGGAGAAGAAGAGTTGTGTGGT
                      ____________________________________________________________
consensus             GGCGGCGGCGACGACAGAGCGGGGCGGGAGATGAAGATAGGAGAAGAAGAGTTGTGTGGT
 
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JMFS058C12+           TTAGGAAACTGGAATTCCACAGGT                                    
JMFS127G03+           TTAGGAAACTGGAATTCCACAGGT                                    
JMFF038I12+           TTAGGAAACTGGAATTCCACAGGTGGCACTATCGCTCTGGAAGTAAGATCGCTATTGAAT
                      ____________________________________________________________
consensus             TTAGGAAACTGGAATTCCACAGGTGGCACTATCGCTCTGGAAGTAAGATCGCTATTGAAT