Contig 006037:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006D09Sequence582006037 (2)ref|XP_011086005.1|4e-59PREDICTED: senescence-specific cysteine protease SAG39-like [Sesamum indicum]748002515 (2)ref|XP_010045986.1|6e-57PREDICTED: ervatamin-B-like [Eucalyptus grandis] gb|KCW84688.1| hypothetical pro
JMFF037A11Sequence573006037 (2)ref|XP_011086005.1|6e-59PREDICTED: senescence-specific cysteine protease SAG39-like [Sesamum indicum]706002515 (2)ref|XP_010045986.1|2e-52PREDICTED: ervatamin-B-like [Eucalyptus grandis] gb|KCW84688.1| hypothetical pro

Alignment

This contig is upended


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JMFF006D09+                             TNTGCAGCCGTAGTTTTTAAGGTTGCAGTCGAGGAGTTGCTG
JMFF037A11+                                                     GCAGTCGAGGAGTTGCTG
                      ____________________________________________________________
consensus                               TNTGCAGCCGTAGTTTTTAAGGTTGCAGTCGAGGAGTTGCTG
 
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JMFF006D09+           TTCGGATAAGCGCATTAGTTGGCCTGTTCTGATTTGGGTTATTCCTTCCATAGCCGCCAC
JMFF037A11+           TTCGGATAAGCGCATTAGTTGGCCTGTTCTGATTTGGGTTATTCCTTCCATAGCCGCCAC
                      ____________________________________________________________
consensus             TTCGGATAAGCGCATTAGTTGGCCTGTTCTGATTTGGGTTATTCCTTCCATAGCCGCCAC
 
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JMFF006D09+           CGCAGAAAATGCCCAGCAACAACCGCAGTATCCTTGATTTTTTATATCAGTCACAGCACC
JMFF037A11+           CGCAGAAAATGCCCAGCAACAACCGCAGTATCCTTGATTTTTTATATCAGTCACAGCACC
                      ____________________________________________________________
consensus             CGCAGAAAATGCCCAGCAACAACCGCAGTATCCTTGATTTTTTATATCAGTCACAGCACC
 
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JMFF006D09+           CTTCTCTCTCCAGTCCAAATACTNTGGAACTTCAGCCAAACTCTCATTCAGCAAGGATGC
JMFF037A11+           CTTCTCTCTCCAGTCCAAATACTCTGGAACTTCAGCCAAACTCTCATTCAGCAAGGATGC
                      ____________________________________________________________
consensus             CTTCTCTCTCCAGTCCAAATACTCTGGAACTTCAGCCAAACTCTCATTCAGCAAGGATGC
 
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JMFF006D09+           TGGTTTTGAAGGCCTAGGGCGTGGGGGTGCCTTTCCTTCATTAAGCATGGTGGCCTTAAA
JMFF037A11+           TGGTTTTGAAGGCCTAGGGCGTGGGGGTGCCTTTCCTTCATTAAGCATGGTGGCCTTAAA
                      ____________________________________________________________
consensus             TGGTTTTGAAGGCCTAGGGCGTGGGGGTGCCTTTCCTTCATTAAGCATGGTGGCCTTAAA
 
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JMFF006D09+           CTCTTCGTTAGTTAAATCGCTAAACTTTTTGACACCAAGTTTATAAGATTGATTGCCAGC
JMFF037A11+           CTCTTCGTTAGTTAAATCGCTAAACTTTTTGACACCAAGTTTATAAGATTGATTGCCAGC
                      ____________________________________________________________
consensus             CTCTTCGTTAGTTAAATCGCTAAACTTTTTGACACCAAGTTTATAAGATTGATTGCCAGC
 
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JMFF006D09+           TTTGTTAAATGACTCAATGAACTTCACGTTTTGCTCAAATATCTTGAATCGTTTTGCCTT
JMFF037A11+           TTTGTTAAATGACTCAATGAACTTCACGTTTTGCTCAAATATCTTGAATCGTTTTGCCTT
                      ____________________________________________________________
consensus             TTTGTTAAATGACTCAATGAACTTCACGTTTTGCTCAAATATCTTGAATCGTTTTGCCTT
 
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JMFF006D09+           TTCTGCATCATTTTTGTATGAGCGCCCATGGTGAACCATCCACTTTTCATGGCGCTCGAG
JMFF037A11+           TTCTGCATCATTTTTGTATGAGCGCCCATGGTGAACCATCCACTTTTCATGGCGCTCGAG
                      ____________________________________________________________
consensus             TTCTGCATCATTTTTGTATGAGCGCCCATGGTGAACCATCCACTTTTCATGGCGCTCGAG
 
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JMFF006D09+           CATAGAAGGTTCTTCGTCGAGGGCAGTGGCTTGAGATGCAAACGCCCCCAACAGGAGAAC
JMFF037A11+           CATAGAAGGTTCTTCGTCGAGGGCAGTGGCTTGAGATGCAAACGCCCCCAACAGGAGAAC
                      ____________________________________________________________
consensus             CATAGAAGGTTCTTCGTCGAGGGCAGTGGCTTGAGATGCAAACGCCCCCAACAGGAGAAC
 
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JMFF006D09+           TGCTGCAAGAATCAATTGGAAATCAAAGTTGGAGGCCATGGAAGATAGTATGTTTGTGGT
JMFF037A11+           TGCTGCAAGAATCAATTGGAAATCAAAGTTGGAGGCCATGGAAGATAGTATGTTTGTGGT
                      ____________________________________________________________
consensus             TGCTGCAAGAATCAATTGGAAATCAAAGTTGGAGGCCATGGAAGATAGTATGTTTGTGGT