Contig 006034:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036I11Sequence535006034 (2)ref|XP_009797730.1|3e-59PREDICTED: BTB/POZ and MATH domain-containing protein 3-like isoform X2 [Nicoti745011121 (3)emb|CDP00137.1|1e-60unnamed protein product [Coffea canephora]
JMFF050F10Sequence642006034 (2)ref|XP_009601989.1|2e-102PREDICTED: BTB/POZ and MATH domain-containing protein 3-like isoform X2 [Nicoti639017033emb|CDP00137.1|2e-31unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF050F10+                CTGCCAACTTCAGAATCTAGCAAGTACTTGAGATTNAGGCCCATGTCCGAGGCGG
                      ____________________________________________________________
consensus                  CTGCCAACTTCAGAATCTAGCAAGTACTTGAGATTNAGGCCCATGTCCGAGGCGG
 
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JMFF050F10+           GAATAGAAATGCTATATTGTTTGNGCCCTTCAACCCGAGTTCTGACAACTCCTACAGTAC
                      ____________________________________________________________
consensus             GAATAGAAATGCTATATTGTTTGNGCCCTTCAACCCGAGTTCTGACAACTCCTACAGTAC
 
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JMFF050F10+           AATGCATTGAGAGGCAATCATCCTTAATATAGTCAGAGGCTTCTAAATTTGCTCGCTTGA
                      ____________________________________________________________
consensus             AATGCATTGAGAGGCAATCATCCTTAATATAGTCAGAGGCTTCTAAATTTGCTCGCTTGA
 
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JMFF050F10+           AAAATCTCTTGTAACCCCACATGCTTCCTTTGTATTTCAAAGTATAAGGCCCGCTCTCGA
                      ____________________________________________________________
consensus             AAAATCTCTTGTAACCCCACATGCTTCCTTTGTATTTCAAAGTATAAGGCCCGCTCTCGA
 
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JMFF050F10+           GGGCCCGATCGAAATGGGAGTGCACTTTGTGCTTCCCTTTCCCGCTCTGATCCATCAAGG
JMFF036I11+                CGATCGAAATGGGAGTGCACTTTGTGCTTCCCTTTCCCGCTCTGATCCATCAAGG
                      ____________________________________________________________
consensus             GGGCCCGATCGAAATGGGAGTGCACTTTGTGCTTCCCTTTCCCGCTCTGATCCATCAAGG
 
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JMFF050F10+           TGAGCTCAAACAAGGCCCTGAGGTCGGTGCCTTCGCTGGCGAGCGCGATGAAAACGGAAA
JMFF036I11+           TGAGCTCAAACAAGGCCCTGACGTCGGTGCCTTCGCTGGCGAGCGCGATGAAAACGGAAA
                      ____________________________________________________________
consensus             TGAGCTCAAACAAGGCCCTGAGGTCGGTGCCTTCGCTGGCGAGCGCGATGAAAACGGAAA
 
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JMFF050F10+           CGTAGATGGAGGAATCCTCGACGTTCTTGCCGTCGGGGTAAAAGTAGACGGCCCAATCGT
JMFF036I11+           CGTAGATGGAGGAATCCTCGACGTTCTTGCCGTCGGGGTAAAAGTAGACGGCCCAATCGT
                      ____________________________________________________________
consensus             CGTAGATGGAGGAATCCTCGACGTTCTTGCCGTCGGGGTAAAAGTAGACGGCCCAATCGT
 
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JMFF050F10+           AGCCGCCGACGGAGAAGGTATCGCTGGAGATGTACTTGCCAGGACCCATGCCCTTGGCCA
JMFF036I11+           AGCCGCCGACGGAGAAGGTATCGCTGGAGATGTACTTGCCAGGACCCATGCCCTTGGCCA
                      ____________________________________________________________
consensus             AGCCGCCGACGGAGAAGGTATCGCTGGAGATGTACTTGCCAGGACCCATGCCCTTGGCCA
 
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JMFF050F10+           GAGAGTAACCCCGGATGGTGAATTTGTGGGAGGCATTCACCGTCTCGTTGATCGACCTCG
JMFF036I11+           GAGAGTAACCCCGGATGGTGAATTTGTGGGAGGCATTCACCGTCTCGTTGATCGACCTCG
                      ____________________________________________________________
consensus             GAGAGTAACCCCGGATGGTGAATTTGTGGGAGGCATTCACCGTCTCGTTGATCGACCTCG
 
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JMFF050F10+           AGCAGGAGTCCTGGTGATTCACGGCCATATCATCGGCCGGAAATCCAGACAGAAGGGAAA
JMFF036I11+           AGCAGGAGTCCTGGTGATTCACGGCCATATCACCGGCCGGAAATCCAGACAGAAGGGAAA
                      ____________________________________________________________
consensus             AGCAGGAGTCCTGGTGATTCACGGCCATATCATCGGCCGGAAATCCAGACAGAAGGGAAA
 
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JMFF050F10+           CCGCAGACGATAGAATTAGGAGAATTGGAGGAAGAAGCAGTAGTGGT             
JMFF036I11+           CCGCAGACGATAGAATTAGGAGAATTGGAGGAAGAAGCAGTAGTGGTAGGGGGGGAATGG
                      ____________________________________________________________
consensus             CCGCAGACGATAGAATTAGGAGAATTGGAGGAAGAAGCAGTAGTGGTAGGGGGGGAATGG
 
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JMFF036I11+           GGGCGGGCGAAGGGTTTGTATGTCGGAGGAGAAACGAGAGGAGGAGAAAAGTGGTGGTGG
                      ____________________________________________________________
consensus             GGGCGGGCGAAGGGTTTGTATGTCGGAGGAGAAACGAGAGGAGGAGAAAAGTGGTGGTGG
 
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JMFF036I11+           TGGTGGTGGCGGCGGCGATTGGCGAAGGAGAGCAACGGTGAGCGGTGATTGGATGTAATT
                      ____________________________________________________________
consensus             TGGTGGTGGCGGCGGCGATTGGCGAAGGAGAGCAACGGTGAGCGGTGATTGGATGTAATT