| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030M19 | Sequence | 447 | 006033 (4) | gb|KDO70549.1| | 6e-37 | hypothetical protein CISIN_1g039003mg [Citrus sinensis] | 495 | 011196 (2) | ref|XP_004230267.1| | 6e-12 | PREDICTED: F-box protein PP2-B15-like [Solanum lycopersicum] |
| JMFF036G24 | Sequence | 547 | 006033 (4) | ref|XP_011073000.1| | 2e-20 | PREDICTED: aldose 1-epimerase [Sesamum indicum] | 693 | 005471 (2) | ref|XP_006341518.1| | 3e-75 | PREDICTED: aldose 1-epimerase-like [Solanum tuberosum] |
| JMFF047F22 | Sequence | 625 | 006033 (4) | ref|XP_006344703.1| | 6e-72 | PREDICTED: F-box protein PP2-B15-like [Solanum tuberosum] | 513 | 011196 (2) | ref|XP_009596287.1| | 3e-07 | PREDICTED: F-box protein PP2-B13-like [Nicotiana tomentosiformis] |
| JMSF012B18 | Sequence | 212 | 006033 (4) | gb|ABB77431.1| | 7e-08 | non-S-locus F-box-like protein 2011 [Petunia integrifolia subsp. inflata] | 728 | 005471 (2) | ref|XP_006341518.1| | 3e-132 | PREDICTED: aldose 1-epimerase-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFF047F22+ TCAAGCCCAAAGGCGCCGTCCGATATGTTCATCACCAGATAAAC
____________________________________________________________
consensus TCAAGCCCAAAGGCGCCGTCCGATATGTTCATCACCAGATAAAC
. : . : . : . : . : . :
JMFF047F22+ GCCGTAGTTGGTGTTTGGCGACAAAATCCCTCGTTTCACTTTCCCTTCAATCTCTAGCCG
____________________________________________________________
consensus GCCGTAGTTGGTGTTTGGCGACAAAATCCCTCGTTTCACTTTCCCTTCAATCTCTAGCCG
. : . : . : . : . : . :
JMFF047F22+ GCAGATCATTTTCAGCTCCGCCGCCTCTGAAAACCTTGATTCTGGGATGGATTTCCATGT
____________________________________________________________
consensus GCAGATCATTTTCAGCTCCGCCGCCTCTGAAAACCTTGATTCTGGGATGGATTTCCATGT
. : . : . : . : . : . :
JMFF030M19+ CGTCACTGTATAAAATTGAGAGCTCTTTTGCAGACAGCATATATGA
JMFF047F22+ CCAATGCTCAGGCTCGTCACTGTATAAAATTGAGAGCTCTTTTGCAGACAGCATATATGA
____________________________________________________________
consensus CCAATGCTCAGGCTCGTCACTGTATAAAATTGAGAGCTCTTTTGCAGACAGCATATATGA
. : . : . : . : . : . :
JMFF030M19+ CTTCAGACCACTTGACTTTTCTAGTGCAAAGCTCTTTTTACCATCATCTATGAGTATGGA
JMFF047F22+ CTTCAGACCACTTGACTTTTCTAGTGCAAAGCTCTTTTTACCATCATCTATGAGTATGGA
____________________________________________________________
consensus CTTCAGACCACTTGACTTTTCTAGTGCAAAGCTCTTTTTACCATCATCTATGAGTATGGA
. : . : . : . : . : . :
JMFF030M19+ GTTGCAGAGACGGACAAAGAGGTCCTTATTTGACGAAAACGTGGTCGCCGTTACAGATTT
JMFF047F22+ GTTGCAGAGACGGACAAAGAGGTCCTTATTTGACGAAAACGTGGTCGCCGTTACAGATTT
____________________________________________________________
consensus GTTGCAGAGACGGACAAAGAGGTCCTTATTTGACGAAAACGTGGTCGCCGTTACAGATTT
. : . : . : . : . : . :
JMFF030M19+ TGCGACGATTTCTTTATAATCCGGCGGCAAGAATCCGCCCCAGACGGAGTCGGAGTCGGC
JMFF047F22+ TGCGACGATTTCTTTATAATCCGGCGGCAAGAATCCGCCCCAGACGGAGTCGGAGTCGGC
____________________________________________________________
consensus TGCGACGATTTCTTTATAATCCGGCGGCAAGAATCCGCCCCAGACGGAGTCGGAGTCGGC
. : . : . : . : . : . :
JMFF030M19+ GGCGGAGCGGAGGGTGGAAGATACCGATGATAGACGGAAGGCGTCGAGTGGGGAAGTGAG
JMFF047F22+ GGCGGAGCGGAGGGTGGAAGATACCGATGATAGACGGAAGGCGTCGAGTGGGGAAGTGAG
JMSF012B18- GGAAGATACCGATGATAGGCGGAAGGCGTCGAGTGGGGAAGTGAG
JMFF036G24- GGAAGATACCGATGATAGGCGGAAGGCGTCGAGTGGGGAAGTGAG
____________________________________________________________
consensus GGCGGAGCGGAGGGTGGAAGATACCGATGATAGGCGGAAGGCGTCGAGTGGGGAAGTGAG
. : . : . : . : . : . :
JMFF030M19+ GGAAAGAATGGTGGAAAGGCAATCTTCCGGCAACATCTCCA
JMFF047F22+ GGAAAGAATGGTGGAAAGGCAATCTTCCGGCAACATCTCCA
JMSF012B18- GGAAAGAATGGTGTAAAGGCAATCTTCCGG
JMFF036G24- GGAAAGAATGGTGTAAAGGCAATCTTCCGGCAACATCTCCAAATTCTTCATTGCCATGTT
____________________________________________________________
consensus GGAAAGAATGGTGTAAAGGCAATCTTCCGGCAACATCTCCAAATTCTTCATTGCCATGTT
. : . : . : . : . : . :
JMFF036G24- CTAAGAATACTATGAAAATCCAAGAAAGCCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
____________________________________________________________
consensus CTAAGAATACTATGAAAATCCAAGAAAGCCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
. : . : . : . : . : . :
JMFF036G24- AGTTGAAAGATTGGATATAACAATGCCTTCCCACTGCTGCAACACATCGAACGAAGTATC
____________________________________________________________
consensus AGTTGAAAGATTGGATATAACAATGCCTTCCCACTGCTGCAACACATCGAACGAAGTATC
. : . : . : . : . : . :
JMFF036G24- TCGAGAATTTTGGTGATTGTAGAACAATGGCGGAAGCAAATATCTTTGAACTCAACAATG
____________________________________________________________
consensus TCGAGAATTTTGGTGATTGTAGAACAATGGCGGAAGCAAATATCTTTGAACTCAACAATG
. : . : . : . : . : . :
JMFF036G24- GCACAATCCAAGTTAAGGTTTCAAACTATGGCTGCACCATCACCTCCTTGTCTGTACCAG
____________________________________________________________
consensus GCACAATCCAAGTTAAGGTTTCAAACTATGGCTGCACCATCACCTCCTTGTCTGTACCAG
. : . : . : . : . : . :
JMFF036G24- ATAAAGATGGGAAATTGGATGATGTGGTTCTTGGATTCGACACGCTTGAACCCTACCAGA
____________________________________________________________
consensus ATAAAGATGGGAAATTGGATGATGTGGTTCTTGGATTCGACACGCTTGAACCCTACCAGA