Contig 006033:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030M19Sequence447006033 (4)gb|KDO70549.1|6e-37hypothetical protein CISIN_1g039003mg [Citrus sinensis]495011196 (2)ref|XP_004230267.1|6e-12PREDICTED: F-box protein PP2-B15-like [Solanum lycopersicum]
JMFF036G24Sequence547006033 (4)ref|XP_011073000.1|2e-20PREDICTED: aldose 1-epimerase [Sesamum indicum]693005471 (2)ref|XP_006341518.1|3e-75PREDICTED: aldose 1-epimerase-like [Solanum tuberosum]
JMFF047F22Sequence625006033 (4)ref|XP_006344703.1|6e-72PREDICTED: F-box protein PP2-B15-like [Solanum tuberosum]513011196 (2)ref|XP_009596287.1|3e-07PREDICTED: F-box protein PP2-B13-like [Nicotiana tomentosiformis]
JMSF012B18Sequence212006033 (4)gb|ABB77431.1|7e-08non-S-locus F-box-like protein 2011 [Petunia integrifolia subsp. inflata]728005471 (2)ref|XP_006341518.1|3e-132PREDICTED: aldose 1-epimerase-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF047F22+ TCAAGCCCAAAGGCGCCGTCCGATATGTTCATCACCAGATAAAC
                      ____________________________________________________________
consensus TCAAGCCCAAAGGCGCCGTCCGATATGTTCATCACCAGATAAAC
 
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JMFF047F22+ GCCGTAGTTGGTGTTTGGCGACAAAATCCCTCGTTTCACTTTCCCTTCAATCTCTAGCCG
                      ____________________________________________________________
consensus GCCGTAGTTGGTGTTTGGCGACAAAATCCCTCGTTTCACTTTCCCTTCAATCTCTAGCCG
 
. : . : . : . : . : . :
JMFF047F22+ GCAGATCATTTTCAGCTCCGCCGCCTCTGAAAACCTTGATTCTGGGATGGATTTCCATGT
                      ____________________________________________________________
consensus GCAGATCATTTTCAGCTCCGCCGCCTCTGAAAACCTTGATTCTGGGATGGATTTCCATGT
 
. : . : . : . : . : . :
JMFF030M19+ CGTCACTGTATAAAATTGAGAGCTCTTTTGCAGACAGCATATATGA
JMFF047F22+ CCAATGCTCAGGCTCGTCACTGTATAAAATTGAGAGCTCTTTTGCAGACAGCATATATGA
                      ____________________________________________________________
consensus CCAATGCTCAGGCTCGTCACTGTATAAAATTGAGAGCTCTTTTGCAGACAGCATATATGA
 
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JMFF030M19+ CTTCAGACCACTTGACTTTTCTAGTGCAAAGCTCTTTTTACCATCATCTATGAGTATGGA
JMFF047F22+ CTTCAGACCACTTGACTTTTCTAGTGCAAAGCTCTTTTTACCATCATCTATGAGTATGGA
                      ____________________________________________________________
consensus CTTCAGACCACTTGACTTTTCTAGTGCAAAGCTCTTTTTACCATCATCTATGAGTATGGA
 
. : . : . : . : . : . :
JMFF030M19+ GTTGCAGAGACGGACAAAGAGGTCCTTATTTGACGAAAACGTGGTCGCCGTTACAGATTT
JMFF047F22+ GTTGCAGAGACGGACAAAGAGGTCCTTATTTGACGAAAACGTGGTCGCCGTTACAGATTT
                      ____________________________________________________________
consensus GTTGCAGAGACGGACAAAGAGGTCCTTATTTGACGAAAACGTGGTCGCCGTTACAGATTT
 
. : . : . : . : . : . :
JMFF030M19+ TGCGACGATTTCTTTATAATCCGGCGGCAAGAATCCGCCCCAGACGGAGTCGGAGTCGGC
JMFF047F22+ TGCGACGATTTCTTTATAATCCGGCGGCAAGAATCCGCCCCAGACGGAGTCGGAGTCGGC
                      ____________________________________________________________
consensus TGCGACGATTTCTTTATAATCCGGCGGCAAGAATCCGCCCCAGACGGAGTCGGAGTCGGC
 
. : . : . : . : . : . :
JMFF030M19+ GGCGGAGCGGAGGGTGGAAGATACCGATGATAGACGGAAGGCGTCGAGTGGGGAAGTGAG
JMFF047F22+ GGCGGAGCGGAGGGTGGAAGATACCGATGATAGACGGAAGGCGTCGAGTGGGGAAGTGAG
JMSF012B18- GGAAGATACCGATGATAGGCGGAAGGCGTCGAGTGGGGAAGTGAG
JMFF036G24- GGAAGATACCGATGATAGGCGGAAGGCGTCGAGTGGGGAAGTGAG
                      ____________________________________________________________
consensus GGCGGAGCGGAGGGTGGAAGATACCGATGATAGGCGGAAGGCGTCGAGTGGGGAAGTGAG
 
. : . : . : . : . : . :
JMFF030M19+ GGAAAGAATGGTGGAAAGGCAATCTTCCGGCAACATCTCCA
JMFF047F22+ GGAAAGAATGGTGGAAAGGCAATCTTCCGGCAACATCTCCA
JMSF012B18- GGAAAGAATGGTGTAAAGGCAATCTTCCGG
JMFF036G24- GGAAAGAATGGTGTAAAGGCAATCTTCCGGCAACATCTCCAAATTCTTCATTGCCATGTT
                      ____________________________________________________________
consensus GGAAAGAATGGTGTAAAGGCAATCTTCCGGCAACATCTCCAAATTCTTCATTGCCATGTT
 
. : . : . : . : . : . :
JMFF036G24- CTAAGAATACTATGAAAATCCAAGAAAGCCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
                      ____________________________________________________________
consensus CTAAGAATACTATGAAAATCCAAGAAAGCCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
 
. : . : . : . : . : . :
JMFF036G24- AGTTGAAAGATTGGATATAACAATGCCTTCCCACTGCTGCAACACATCGAACGAAGTATC
                      ____________________________________________________________
consensus AGTTGAAAGATTGGATATAACAATGCCTTCCCACTGCTGCAACACATCGAACGAAGTATC
 
. : . : . : . : . : . :
JMFF036G24- TCGAGAATTTTGGTGATTGTAGAACAATGGCGGAAGCAAATATCTTTGAACTCAACAATG
                      ____________________________________________________________
consensus TCGAGAATTTTGGTGATTGTAGAACAATGGCGGAAGCAAATATCTTTGAACTCAACAATG
 
. : . : . : . : . : . :
JMFF036G24- GCACAATCCAAGTTAAGGTTTCAAACTATGGCTGCACCATCACCTCCTTGTCTGTACCAG
                      ____________________________________________________________
consensus GCACAATCCAAGTTAAGGTTTCAAACTATGGCTGCACCATCACCTCCTTGTCTGTACCAG
 
. : . : . : . : . : . :
JMFF036G24- ATAAAGATGGGAAATTGGATGATGTGGTTCTTGGATTCGACACGCTTGAACCCTACCAGA
                      ____________________________________________________________
consensus ATAAAGATGGGAAATTGGATGATGTGGTTCTTGGATTCGACACGCTTGAACCCTACCAGA